| Literature DB >> 22220047 |
R Anitha, S Athimoolam, S Asath Bahadur, M Gunasekaran.
Abstract
The title compound, C(6)H(7)N(2)O(2) (+)·Br(-), is isomorphous with 2-nitro-anilinium chloride and contains an characteristic intra-molecular N-H⋯O hydrogen bond, forming an S(6) motif. Inter-molecular N-H⋯Br hydrogen bonds occur in the crystal structure. Two zigzag chains of C(2) (1)(4) motifs extend along the b-axis direction. These primary chain motifs inter-sect like a double helix structure, leading to R(6) (3)(12) ring motifs, which are arranged in tandem along the b axis. Hence, hydro-philic layers are generated at z = 1/4 and 3/4, which are sandwiched between alternate hydro-phobic layers across z = 0 and 1/2.Entities:
Year: 2011 PMID: 22220047 PMCID: PMC3247429 DOI: 10.1107/S1600536811041948
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H7N2O2+·Br− | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2610 reflections |
| θ = 2.6–24.6° | |
| µ = 5.25 mm−1 | |
| Block, colourless | |
| 0.21 × 0.19 × 0.17 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 1107 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.0°, θmin = 1.7° |
| ω scans | |
| 12000 measured reflections | |
| 1372 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1372 reflections | (Δ/σ)max = 0.001 |
| 112 parameters | Δρmax = 0.74 e Å−3 |
| 0 restraints | Δρmin = −0.38 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.79124 (4) | 0.19991 (4) | 0.286284 (13) | 0.04040 (17) | |
| C1 | 0.8664 (4) | 0.5387 (3) | 0.09113 (11) | 0.0305 (7) | |
| C2 | 0.8275 (3) | 0.4633 (3) | 0.14194 (11) | 0.0282 (7) | |
| C3 | 0.6626 (4) | 0.4451 (4) | 0.15682 (13) | 0.0348 (7) | |
| H3 | 0.6347 | 0.3967 | 0.1910 | 0.042* | |
| C4 | 0.5389 (4) | 0.4989 (5) | 0.12095 (13) | 0.0432 (8) | |
| H4 | 0.4276 | 0.4834 | 0.1305 | 0.052* | |
| C5 | 0.5790 (4) | 0.5754 (4) | 0.07105 (13) | 0.0462 (9) | |
| H5 | 0.4948 | 0.6128 | 0.0474 | 0.055* | |
| C6 | 0.7426 (4) | 0.5965 (4) | 0.05606 (13) | 0.0410 (8) | |
| H6 | 0.7698 | 0.6493 | 0.0226 | 0.049* | |
| N2 | 0.9543 (4) | 0.4115 (4) | 0.18231 (12) | 0.0329 (6) | |
| N1 | 1.0379 (4) | 0.5526 (3) | 0.07159 (10) | 0.0399 (7) | |
| O1 | 1.1385 (3) | 0.4512 (3) | 0.08824 (9) | 0.0533 (7) | |
| O2 | 1.0721 (3) | 0.6593 (3) | 0.03787 (11) | 0.0675 (8) | |
| H1N | 1.020 (4) | 0.348 (4) | 0.1700 (14) | 0.040 (11)* | |
| H2N | 1.020 (7) | 0.494 (6) | 0.1982 (18) | 0.100 (16)* | |
| H3N | 0.902 (6) | 0.351 (5) | 0.2156 (15) | 0.070 (12)* |
| Br1 | 0.0387 (2) | 0.0383 (2) | 0.0443 (3) | 0.00825 (15) | 0.00844 (14) | 0.00908 (14) |
| C1 | 0.0328 (16) | 0.0321 (17) | 0.0266 (16) | 0.0011 (14) | 0.0013 (13) | −0.0034 (12) |
| C2 | 0.0276 (15) | 0.0292 (16) | 0.0277 (16) | 0.0021 (12) | −0.0041 (12) | −0.0039 (12) |
| C3 | 0.0304 (16) | 0.0439 (19) | 0.0300 (16) | −0.0013 (15) | 0.0029 (13) | −0.0014 (14) |
| C4 | 0.0295 (17) | 0.058 (2) | 0.0422 (19) | 0.0049 (17) | −0.0016 (15) | −0.0075 (17) |
| C5 | 0.041 (2) | 0.058 (2) | 0.0395 (18) | 0.0158 (17) | −0.0142 (15) | −0.0036 (17) |
| C6 | 0.050 (2) | 0.0449 (19) | 0.0280 (17) | 0.0063 (17) | −0.0044 (14) | 0.0035 (14) |
| N2 | 0.0288 (15) | 0.0392 (16) | 0.0306 (15) | −0.0038 (15) | −0.0048 (12) | 0.0051 (14) |
| N1 | 0.0394 (16) | 0.0507 (18) | 0.0296 (14) | −0.0036 (15) | 0.0023 (12) | −0.0026 (13) |
| O1 | 0.0339 (13) | 0.0780 (19) | 0.0481 (14) | 0.0083 (13) | 0.0047 (11) | 0.0051 (13) |
| O2 | 0.0715 (19) | 0.0676 (16) | 0.0635 (17) | −0.0107 (16) | 0.0210 (14) | 0.0255 (14) |
| C1—C6 | 1.380 (4) | C5—C6 | 1.372 (5) |
| C1—C2 | 1.391 (4) | C5—H5 | 0.9300 |
| C1—N1 | 1.458 (4) | C6—H6 | 0.9300 |
| C2—C3 | 1.378 (4) | N2—H1N | 0.79 (3) |
| C2—N2 | 1.461 (4) | N2—H2N | 0.93 (6) |
| C3—C4 | 1.380 (4) | N2—H3N | 1.02 (4) |
| C3—H3 | 0.9300 | N1—O2 | 1.213 (3) |
| C4—C5 | 1.378 (5) | N1—O1 | 1.220 (3) |
| C4—H4 | 0.9300 | ||
| C6—C1—C2 | 120.9 (3) | C4—C5—H5 | 119.9 |
| C6—C1—N1 | 117.5 (3) | C5—C6—C1 | 119.3 (3) |
| C2—C1—N1 | 121.6 (3) | C5—C6—H6 | 120.3 |
| C3—C2—C1 | 119.1 (3) | C1—C6—H6 | 120.3 |
| C3—C2—N2 | 118.0 (3) | C2—N2—H1N | 114 (2) |
| C1—C2—N2 | 122.8 (3) | C2—N2—H2N | 117 (3) |
| C2—C3—C4 | 119.9 (3) | H1N—N2—H2N | 103 (4) |
| C2—C3—H3 | 120.1 | C2—N2—H3N | 111 (2) |
| C4—C3—H3 | 120.1 | H1N—N2—H3N | 104 (3) |
| C5—C4—C3 | 120.5 (3) | H2N—N2—H3N | 106 (3) |
| C5—C4—H4 | 119.8 | O2—N1—O1 | 123.2 (3) |
| C3—C4—H4 | 119.8 | O2—N1—C1 | 118.7 (3) |
| C6—C5—C4 | 120.3 (3) | O1—N1—C1 | 118.0 (3) |
| C6—C5—H5 | 119.9 | ||
| C6—C1—C2—C3 | 0.7 (4) | C4—C5—C6—C1 | 0.7 (5) |
| N1—C1—C2—C3 | −176.3 (3) | C2—C1—C6—C5 | −1.6 (5) |
| C6—C1—C2—N2 | −175.3 (3) | N1—C1—C6—C5 | 175.5 (3) |
| N1—C1—C2—N2 | 7.8 (4) | C6—C1—N1—O2 | 25.6 (4) |
| C1—C2—C3—C4 | 1.1 (5) | C2—C1—N1—O2 | −157.3 (3) |
| N2—C2—C3—C4 | 177.3 (3) | C6—C1—N1—O1 | −151.2 (3) |
| C2—C3—C4—C5 | −2.0 (5) | C2—C1—N1—O1 | 25.9 (4) |
| C3—C4—C5—C6 | 1.1 (5) |
| H··· | ||||
| N2—H1N···O1 | 0.79 (3) | 2.32 (3) | 2.702 (4) | 111 (3) |
| N2—H1N···Br1i | 0.79 (3) | 2.70 (4) | 3.291 (3) | 133 (3) |
| N2—H2N···Br1ii | 0.93 (6) | 2.29 (6) | 3.197 (3) | 165 (4) |
| N2—H3N···Br1 | 1.02 (4) | 2.26 (4) | 3.284 (3) | 176 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.79 (3) | 2.32 (3) | 2.702 (4) | 111 (3) |
| N2—H1 | 0.79 (3) | 2.70 (4) | 3.291 (3) | 133 (3) |
| N2—H2 | 0.93 (6) | 2.29 (6) | 3.197 (3) | 165 (4) |
| N2—H3 | 1.02 (4) | 2.26 (4) | 3.284 (3) | 176 (3) |
Symmetry codes: (i) ; (ii) .