Literature DB >> 22219935

N,N-Dimethyl-ethane-1,2-diaminium bis-(3-hy-droxy-benzoate).

Anindita Sarkar1, Ignacy Cukrowski.   

Abstract

In the title compound, C(4)H(14)N(2) (2+)·2C(7)H(5)O(3) (-), both the n class="Chemical">N,N-dimethyl-ethylenediamine N atoms are protonated and two 3-hy-droxy-benzoate anions act as counter-ions. In the crystal, anions and cations are linked by a network of N-H⋯O and O-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22219935      PMCID: PMC3247317          DOI: 10.1107/S1600536811040578

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond lengths in fully protonated polyamines, see: Bujak & Angel (2006 ▶); Bujak & Zaleski (2002 ▶); Doran et al. (2003 ▶); Tn class="CellLine">horn et al. (2005 ▶); Zhang et al. (2007 ▶).

Experimental

Crystal data

C4H14N2 2+·2C7H5O3 − M = 364.39 Monoclinic, a = 14.5439 (3) Å b = 17.5881 (4) Å c = 7.7104 (2) Å β = 114.777 (1)° V = 1790.76 (7) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.49 × 0.12 × 0.03 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: integration (XPREP; Bruker, 2001 ▶) T min = 0.952, T max = 0.997 14114 measured reflections 4292 independent reflections 3635 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.077 S = 0.96 4292 reflections 240 parameters 2 restraints H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack (1983 ▶), 2119 Friedel pairs Flack parameter: 0.00 (7) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL and SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811040578/fj2425sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811040578/fj2425Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811040578/fj2425Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H14N22+·2C7H5O3F(000) = 776
Mr = 364.39Dx = 1.352 Mg m3Dm = 1.352 Mg m3Dm measured by not measured
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 4375 reflections
a = 14.5439 (3) Åθ = 2.3–27.2°
b = 17.5881 (4) ŵ = 0.10 mm1
c = 7.7104 (2) ÅT = 293 K
β = 114.777 (1)°Needle, colourless
V = 1790.76 (7) Å30.49 × 0.12 × 0.03 mm
Z = 4
Bruker APEXII CCD diffractometer4292 independent reflections
Radiation source: fine-focus sealed tube3635 reflections with I > 2σ(I)
graphiteRint = 0.048
φ and ω scansθmax = 28.0°, θmin = 1.9°
Absorption correction: integration (XPREP; Bruker, 2005)h = −19→19
Tmin = 0.952, Tmax = 0.997k = −23→23
14114 measured reflectionsl = −9→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.037P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max < 0.001
4292 reflectionsΔρmax = 0.18 e Å3
240 parametersΔρmin = −0.20 e Å3
2 restraintsAbsolute structure: Flack (1983), 2119 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.00 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O6−0.04233 (9)0.58513 (7)0.31587 (16)0.0236 (3)
H6−0.08770.60240.34100.035*
O40.24002 (8)0.70635 (7)1.07125 (16)0.0235 (3)
N70.41688 (11)0.92211 (8)0.40647 (19)0.0192 (3)
H9A0.40780.95180.49140.029*
H19B0.39100.94460.29260.029*
H8C0.48280.91420.44270.029*
N100.19982 (10)0.78889 (8)0.3324 (2)0.0202 (3)
H10.20570.76530.23250.024*
C70.05796 (12)0.62591 (9)0.6407 (2)0.0174 (3)
H0050.00230.64930.64790.021*
C10.25729 (12)0.86195 (9)0.3681 (2)0.0189 (3)
H3A0.25780.88600.48170.023*
H2B0.22380.89610.26110.023*
O50.08907 (9)0.66203 (7)1.02369 (18)0.0284 (3)
C60.04672 (12)0.58805 (9)0.4740 (2)0.0177 (3)
C80.15193 (12)0.62880 (8)0.7962 (2)0.0170 (3)
C40.36527 (12)0.84847 (9)0.3943 (3)0.0225 (4)
H6A0.40140.81950.51020.027*
H5B0.36520.81930.28750.027*
C190.16091 (12)0.66816 (9)0.9766 (2)0.0186 (3)
C90.23557 (12)0.59331 (9)0.7864 (2)0.0190 (3)
H0120.29890.59610.88880.023*
C100.22300 (13)0.55372 (9)0.6214 (2)0.0215 (4)
H0130.27800.52870.61550.026*
C50.12971 (12)0.55123 (9)0.4663 (2)0.0206 (4)
H0140.12240.52490.35660.025*
C150.09028 (13)0.80408 (11)0.2764 (3)0.0297 (4)
H18C0.08230.83180.37660.044*
H16D0.05440.75670.25570.044*
H17E0.06360.83360.16100.044*
C110.24122 (15)0.73670 (10)0.4997 (3)0.0305 (4)
H13F0.24560.76300.61190.046*
H14G0.30750.71990.51800.046*
H12H0.19730.69350.47700.046*
O10.80917 (9)0.53105 (7)0.53286 (16)0.0231 (3)
O20.78810 (9)0.62504 (7)0.32384 (18)0.0267 (3)
O30.43039 (9)0.70905 (7)0.11670 (19)0.0272 (3)
H30.36970.70250.08570.041*
C230.60027 (13)0.52862 (10)0.4403 (2)0.0229 (4)
H0200.63880.48810.51110.027*
C260.75606 (12)0.57987 (9)0.4128 (2)0.0192 (3)
C250.58608 (13)0.64466 (10)0.2662 (2)0.0199 (4)
H0220.61580.68240.22220.024*
C240.64459 (12)0.58440 (9)0.3717 (2)0.0184 (3)
C220.49872 (13)0.53375 (10)0.4027 (3)0.0256 (4)
H0240.46940.49660.44930.031*
C200.48344 (12)0.64932 (9)0.2253 (2)0.0204 (4)
C210.43992 (13)0.59385 (10)0.2960 (2)0.0235 (4)
H0260.37180.59690.27190.028*
U11U22U33U12U13U23
O60.0184 (6)0.0337 (7)0.0185 (6)−0.0004 (5)0.0076 (5)−0.0060 (5)
O40.0171 (6)0.0275 (7)0.0248 (7)−0.0043 (5)0.0078 (5)−0.0107 (5)
N70.0191 (7)0.0217 (7)0.0169 (7)−0.0024 (6)0.0077 (6)−0.0010 (5)
N100.0213 (7)0.0201 (7)0.0199 (7)−0.0032 (6)0.0094 (6)−0.0044 (6)
C70.0177 (8)0.0160 (8)0.0207 (8)0.0001 (6)0.0103 (7)−0.0004 (7)
C10.0221 (8)0.0167 (8)0.0165 (8)−0.0013 (7)0.0068 (7)−0.0007 (7)
O50.0234 (6)0.0402 (8)0.0262 (7)−0.0092 (6)0.0149 (6)−0.0120 (6)
C60.0193 (8)0.0163 (8)0.0177 (8)−0.0025 (6)0.0081 (7)0.0016 (6)
C80.0204 (8)0.0130 (8)0.0193 (8)−0.0026 (6)0.0099 (7)0.0002 (6)
C40.0220 (9)0.0171 (9)0.0286 (10)−0.0005 (7)0.0107 (8)−0.0008 (7)
C190.0180 (8)0.0188 (8)0.0168 (8)0.0033 (7)0.0051 (7)0.0010 (7)
C90.0161 (8)0.0180 (8)0.0199 (8)−0.0001 (6)0.0047 (7)0.0008 (7)
C100.0202 (8)0.0196 (8)0.0262 (10)0.0041 (7)0.0112 (7)0.0001 (7)
C50.0248 (9)0.0166 (8)0.0224 (9)−0.0012 (7)0.0118 (8)−0.0039 (7)
C150.0216 (9)0.0359 (11)0.0332 (11)−0.0053 (8)0.0132 (9)−0.0075 (9)
C110.0375 (11)0.0220 (9)0.0344 (11)−0.0023 (8)0.0173 (10)0.0045 (8)
O10.0219 (6)0.0241 (6)0.0191 (6)0.0058 (5)0.0046 (5)0.0003 (5)
O20.0213 (6)0.0294 (7)0.0322 (7)0.0044 (5)0.0139 (6)0.0091 (6)
O30.0149 (6)0.0242 (6)0.0393 (8)0.0024 (5)0.0081 (6)0.0063 (6)
C230.0261 (9)0.0210 (9)0.0197 (9)0.0017 (7)0.0078 (7)0.0026 (7)
C260.0190 (8)0.0213 (9)0.0151 (8)0.0007 (7)0.0050 (7)−0.0051 (7)
C250.0202 (8)0.0216 (8)0.0198 (9)−0.0031 (7)0.0103 (7)−0.0013 (7)
C240.0197 (8)0.0196 (8)0.0143 (8)−0.0009 (6)0.0057 (7)−0.0034 (6)
C220.0271 (9)0.0246 (9)0.0271 (10)−0.0066 (8)0.0134 (8)0.0003 (8)
C200.0194 (8)0.0203 (9)0.0187 (9)0.0000 (7)0.0053 (7)−0.0034 (7)
C210.0174 (8)0.0286 (9)0.0240 (10)−0.0042 (7)0.0083 (7)−0.0043 (7)
O6—C61.358 (2)C10—C51.383 (2)
O6—H60.8200C10—H0130.9300
O4—C191.2664 (19)C5—H0140.9300
N7—C41.480 (2)C15—H18C0.9600
N7—H9A0.8900C15—H16D0.9600
N7—H19B0.8900C15—H17E0.9600
N7—H8C0.8900C11—H13F0.9600
N10—C111.489 (2)C11—H14G0.9600
N10—C151.490 (2)C11—H12H0.9600
N10—C11.494 (2)O1—C261.262 (2)
N10—H10.9100O2—C261.260 (2)
C7—C81.391 (2)O3—C201.363 (2)
C7—C61.395 (2)O3—H30.8200
C7—H0050.9300C23—C221.384 (2)
C1—C41.516 (2)C23—C241.394 (2)
C1—H3A0.9700C23—H0200.9300
C1—H2B0.9700C26—C241.518 (2)
O5—C191.246 (2)C25—C241.389 (2)
C6—C51.393 (2)C25—C201.393 (2)
C8—C91.397 (2)C25—H0220.9300
C8—C191.510 (2)C22—C211.391 (2)
C4—H6A0.9700C22—H0240.9300
C4—H5B0.9700C20—C211.392 (2)
C9—C101.393 (2)C21—H0260.9300
C9—H0120.9300
C6—O6—H6109.5C5—C10—C9120.73 (15)
C4—N7—H9A109.5C5—C10—H013119.6
C4—N7—H19B109.5C9—C10—H013119.6
H9A—N7—H19B109.5C10—C5—C6120.13 (15)
C4—N7—H8C109.5C10—C5—H014119.9
H9A—N7—H8C109.5C6—C5—H014119.9
H19B—N7—H8C109.5N10—C15—H18C109.5
C11—N10—C15110.88 (14)N10—C15—H16D109.5
C11—N10—C1112.24 (13)H18C—C15—H16D109.5
C15—N10—C1110.30 (13)N10—C15—H17E109.5
C11—N10—H1107.7H18C—C15—H17E109.5
C15—N10—H1107.7H16D—C15—H17E109.5
C1—N10—H1107.7N10—C11—H13F109.5
C8—C7—C6120.34 (15)N10—C11—H14G109.5
C8—C7—H005119.8H13F—C11—H14G109.5
C6—C7—H005119.8N10—C11—H12H109.5
N10—C1—C4111.00 (13)H13F—C11—H12H109.5
N10—C1—H3A109.4H14G—C11—H12H109.5
C4—C1—H3A109.4C20—O3—H3109.5
N10—C1—H2B109.4C22—C23—C24119.82 (17)
C4—C1—H2B109.4C22—C23—H020120.1
H3A—C1—H2B108.0C24—C23—H020120.1
O6—C6—C5117.48 (15)O2—C26—O1125.20 (15)
O6—C6—C7123.03 (14)O2—C26—C24117.38 (15)
C5—C6—C7119.49 (15)O1—C26—C24117.43 (15)
C7—C8—C9120.00 (15)C24—C25—C20120.85 (16)
C7—C8—C19119.04 (14)C24—C25—H022119.6
C9—C8—C19120.92 (15)C20—C25—H022119.6
N7—C4—C1109.95 (13)C25—C24—C23119.48 (15)
N7—C4—H6A109.7C25—C24—C26120.04 (15)
C1—C4—H6A109.7C23—C24—C26120.47 (15)
N7—C4—H5B109.7C23—C22—C21120.72 (16)
C1—C4—H5B109.7C23—C22—H024119.6
H6A—C4—H5B108.2C21—C22—H024119.6
O5—C19—O4123.25 (15)O3—C20—C21123.19 (15)
O5—C19—C8118.00 (14)O3—C20—C25117.46 (15)
O4—C19—C8118.74 (14)C21—C20—C25119.35 (16)
C10—C9—C8119.26 (16)C22—C21—C20119.76 (16)
C10—C9—H012120.4C22—C21—H026120.1
C8—C9—H012120.4C20—C21—H026120.1
C11—N10—C1—C464.80 (17)C7—C6—C5—C10−1.4 (2)
C15—N10—C1—C4−171.02 (14)C20—C25—C24—C23−1.1 (2)
C8—C7—C6—O6−178.08 (14)C20—C25—C24—C26179.29 (15)
C8—C7—C6—C51.8 (2)C22—C23—C24—C250.0 (3)
C6—C7—C8—C9−0.4 (2)C22—C23—C24—C26179.60 (15)
C6—C7—C8—C19−178.15 (13)O2—C26—C24—C25−10.9 (2)
N10—C1—C4—N7173.31 (13)O1—C26—C24—C25169.32 (15)
C7—C8—C19—O536.5 (2)O2—C26—C24—C23169.52 (15)
C9—C8—C19—O5−141.30 (16)O1—C26—C24—C23−10.3 (2)
C7—C8—C19—O4−142.72 (15)C24—C23—C22—C210.4 (3)
C9—C8—C19—O439.5 (2)C24—C25—C20—O3−178.29 (15)
C7—C8—C9—C10−1.5 (2)C24—C25—C20—C211.8 (2)
C19—C8—C9—C10176.23 (14)C23—C22—C21—C200.3 (3)
C8—C9—C10—C51.9 (2)O3—C20—C21—C22178.71 (16)
C9—C10—C5—C6−0.4 (3)C25—C20—C21—C22−1.3 (3)
O6—C6—C5—C10178.49 (15)
D—H···AD—HH···AD···AD—H···A
N7—H8C···O5i0.891.942.7169 (18)145
N7—H9A···O1ii0.892.122.8904 (18)145
N7—H19B···O1iii0.891.902.7657 (19)164
N10—H1···O4iv0.911.842.7367 (17)168
O3—H3···O4iv0.821.842.6415 (16)164.
O6—H6···O2v0.821.802.5897 (16)161.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N7—H8C⋯O5i0.891.942.7169 (18)145
N7—H9A⋯O1ii0.892.122.8904 (18)145
N7—H19B⋯O1iii0.891.902.7657 (19)164
N10—H1⋯O4iv0.911.842.7367 (17)168
O3—H3⋯O4iv0.821.842.6415 (16)164
O6—H6⋯O2v0.821.802.5897 (16)161

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  4 in total

1.  High-pressure- and low-temperature-induced changes in [(CH3)2NH(CH2)2NH3][SbCl5].

Authors:  Maciej Bujak; Ross J Angel
Journal:  J Phys Chem B       Date:  2006-06-01       Impact factor: 2.991

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Exploration of composition space in templated uranium sulfates.

Authors:  Michael B Doran; Alexander J Norquist; Dermot O'Hare
Journal:  Inorg Chem       Date:  2003-11-03       Impact factor: 5.165

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.