| Literature DB >> 22219920 |
Hoong-Kun Fun, Madhukar Hemamalini, Prajwal L Lobo, D Jagadeesh Prasad, Boja Poojary.
Abstract
In the title compound, C(15)H(14)Cl(2)N(2)OS, the piperidine ring adopts a chair conformation. The dihedral angle between the thia-zolidine ring and the dichloro-benzene ring is 9.30 (4)°; this near coplanar conformation is stabilized by the formation of an intra-molecular C-H⋯S hydrogen bond, which generates an S(6) ring. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds, forming [001] chains. Weak π-π inter-actions [centroid-centroid separation = 3.5460 (5) Å] consolidate the structure.Entities:
Year: 2011 PMID: 22219920 PMCID: PMC3247615 DOI: 10.1107/S1600536811040785
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H14Cl2N2OS | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 9844 reflections |
| θ = 2.7–35.2° | |
| µ = 0.58 mm−1 | |
| β = 116.407 (1)° | Block, brown |
| 0.44 × 0.25 × 0.13 mm | |
| Bruker SMART APEXII CCD diffractometer | 6673 independent reflections |
| Radiation source: fine-focus sealed tube | 5955 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.4°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 46944 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 6673 reflections | (Δ/σ)max = 0.002 |
| 190 parameters | Δρmax = 0.52 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cl1 | 0.430128 (8) | 0.28966 (3) | 0.729616 (15) | 0.02400 (5) | |
| Cl2 | 0.269296 (8) | 0.51920 (3) | 0.790208 (13) | 0.02382 (5) | |
| S1 | 0.176998 (7) | 0.57324 (3) | 0.374212 (12) | 0.01596 (4) | |
| O1 | 0.11470 (2) | 0.76041 (9) | 0.52929 (4) | 0.02178 (12) | |
| N1 | 0.09082 (3) | 0.72148 (9) | 0.36763 (5) | 0.01686 (11) | |
| N2 | 0.08873 (3) | 0.66216 (10) | 0.21783 (4) | 0.01825 (12) | |
| C1 | 0.28809 (3) | 0.46653 (11) | 0.54975 (5) | 0.01796 (13) | |
| H1A | 0.2688 | 0.4850 | 0.4822 | 0.022* | |
| C2 | 0.33866 (3) | 0.40104 (11) | 0.58547 (6) | 0.01884 (13) | |
| H2A | 0.3540 | 0.3774 | 0.5433 | 0.023* | |
| C3 | 0.36659 (3) | 0.37051 (10) | 0.68400 (6) | 0.01726 (12) | |
| C4 | 0.34481 (3) | 0.40355 (11) | 0.74672 (5) | 0.01740 (12) | |
| H4A | 0.3639 | 0.3797 | 0.8138 | 0.021* | |
| C5 | 0.29438 (3) | 0.47245 (10) | 0.70876 (5) | 0.01601 (12) | |
| C6 | 0.26411 (3) | 0.50678 (10) | 0.60961 (5) | 0.01517 (12) | |
| C7 | 0.21245 (3) | 0.58738 (10) | 0.57455 (5) | 0.01636 (12) | |
| H7A | 0.2028 | 0.6221 | 0.6235 | 0.020* | |
| C8 | 0.17611 (3) | 0.62056 (10) | 0.48355 (5) | 0.01523 (12) | |
| C9 | 0.12450 (3) | 0.70822 (10) | 0.46399 (5) | 0.01629 (12) | |
| C10 | 0.11223 (3) | 0.66071 (10) | 0.31348 (5) | 0.01553 (12) | |
| C11 | 0.03308 (3) | 0.71217 (13) | 0.16554 (6) | 0.02211 (15) | |
| H11A | 0.0227 | 0.7796 | 0.2093 | 0.027* | |
| H11B | 0.0114 | 0.6027 | 0.1450 | 0.027* | |
| C12 | 0.02289 (3) | 0.82567 (13) | 0.07750 (6) | 0.02274 (15) | |
| H12A | 0.0392 | 0.9444 | 0.0988 | 0.027* | |
| H12B | −0.0153 | 0.8434 | 0.0394 | 0.027* | |
| C13 | 0.04478 (3) | 0.73902 (13) | 0.01359 (6) | 0.02228 (15) | |
| H13A | 0.0257 | 0.6267 | −0.0141 | 0.027* | |
| H13B | 0.0398 | 0.8202 | −0.0403 | 0.027* | |
| C14 | 0.10279 (3) | 0.69973 (12) | 0.07298 (6) | 0.01982 (14) | |
| H14A | 0.1221 | 0.8133 | 0.0961 | 0.024* | |
| H14B | 0.1165 | 0.6393 | 0.0320 | 0.024* | |
| C15 | 0.11176 (4) | 0.58124 (12) | 0.15908 (6) | 0.02219 (15) | |
| H15A | 0.0958 | 0.4627 | 0.1359 | 0.027* | |
| H15B | 0.1498 | 0.5640 | 0.1991 | 0.027* |
| Cl1 | 0.01844 (8) | 0.02974 (10) | 0.02435 (9) | 0.00495 (7) | 0.01001 (7) | 0.00259 (7) |
| Cl2 | 0.01920 (9) | 0.04116 (12) | 0.01293 (7) | 0.00453 (7) | 0.00879 (6) | 0.00332 (7) |
| S1 | 0.01586 (8) | 0.02028 (8) | 0.01193 (7) | 0.00101 (6) | 0.00634 (6) | −0.00006 (6) |
| O1 | 0.0210 (3) | 0.0317 (3) | 0.0141 (2) | 0.0032 (2) | 0.0092 (2) | −0.0011 (2) |
| N1 | 0.0159 (3) | 0.0229 (3) | 0.0124 (2) | 0.0001 (2) | 0.0069 (2) | 0.0001 (2) |
| N2 | 0.0163 (3) | 0.0272 (3) | 0.0112 (2) | 0.0023 (2) | 0.0060 (2) | 0.0005 (2) |
| C1 | 0.0199 (3) | 0.0215 (3) | 0.0134 (3) | 0.0007 (3) | 0.0083 (2) | 0.0006 (2) |
| C2 | 0.0208 (3) | 0.0212 (3) | 0.0169 (3) | 0.0014 (3) | 0.0105 (3) | 0.0005 (2) |
| C3 | 0.0165 (3) | 0.0178 (3) | 0.0180 (3) | 0.0004 (2) | 0.0081 (2) | 0.0008 (2) |
| C4 | 0.0167 (3) | 0.0204 (3) | 0.0146 (3) | −0.0003 (2) | 0.0064 (2) | 0.0014 (2) |
| C5 | 0.0164 (3) | 0.0203 (3) | 0.0125 (3) | −0.0014 (2) | 0.0075 (2) | 0.0005 (2) |
| C6 | 0.0158 (3) | 0.0175 (3) | 0.0126 (3) | −0.0016 (2) | 0.0066 (2) | 0.0004 (2) |
| C7 | 0.0166 (3) | 0.0201 (3) | 0.0127 (3) | −0.0010 (2) | 0.0068 (2) | 0.0003 (2) |
| C8 | 0.0159 (3) | 0.0178 (3) | 0.0126 (3) | −0.0014 (2) | 0.0068 (2) | −0.0002 (2) |
| C9 | 0.0164 (3) | 0.0196 (3) | 0.0133 (3) | −0.0010 (2) | 0.0070 (2) | 0.0001 (2) |
| C10 | 0.0150 (3) | 0.0189 (3) | 0.0125 (3) | −0.0008 (2) | 0.0060 (2) | 0.0003 (2) |
| C11 | 0.0155 (3) | 0.0365 (4) | 0.0139 (3) | 0.0009 (3) | 0.0061 (2) | 0.0022 (3) |
| C12 | 0.0190 (3) | 0.0339 (4) | 0.0148 (3) | 0.0050 (3) | 0.0070 (3) | 0.0033 (3) |
| C13 | 0.0230 (4) | 0.0303 (4) | 0.0133 (3) | 0.0015 (3) | 0.0078 (3) | 0.0010 (3) |
| C14 | 0.0220 (3) | 0.0245 (4) | 0.0159 (3) | 0.0008 (3) | 0.0111 (3) | −0.0006 (3) |
| C15 | 0.0252 (4) | 0.0291 (4) | 0.0138 (3) | 0.0072 (3) | 0.0100 (3) | 0.0015 (3) |
| Cl1—C3 | 1.7357 (8) | C6—C7 | 1.4560 (11) |
| Cl2—C5 | 1.7397 (7) | C7—C8 | 1.3498 (10) |
| S1—C8 | 1.7402 (7) | C7—H7A | 0.9500 |
| S1—C10 | 1.7839 (8) | C8—C9 | 1.5148 (11) |
| O1—C9 | 1.2265 (9) | C11—C12 | 1.5207 (12) |
| N1—C10 | 1.3186 (10) | C11—H11A | 0.9900 |
| N1—C9 | 1.3722 (10) | C11—H11B | 0.9900 |
| N2—C10 | 1.3261 (9) | C12—C13 | 1.5296 (12) |
| N2—C15 | 1.4690 (10) | C12—H12A | 0.9900 |
| N2—C11 | 1.4743 (11) | C12—H12B | 0.9900 |
| C1—C2 | 1.3851 (11) | C13—C14 | 1.5223 (12) |
| C1—C6 | 1.4075 (10) | C13—H13A | 0.9900 |
| C1—H1A | 0.9500 | C13—H13B | 0.9900 |
| C2—C3 | 1.3900 (11) | C14—C15 | 1.5252 (12) |
| C2—H2A | 0.9500 | C14—H14A | 0.9900 |
| C3—C4 | 1.3880 (11) | C14—H14B | 0.9900 |
| C4—C5 | 1.3893 (11) | C15—H15A | 0.9900 |
| C4—H4A | 0.9500 | C15—H15B | 0.9900 |
| C5—C6 | 1.4102 (10) | ||
| C8—S1—C10 | 88.74 (3) | N1—C10—S1 | 117.13 (5) |
| C10—N1—C9 | 111.56 (6) | N2—C10—S1 | 118.84 (6) |
| C10—N2—C15 | 122.99 (7) | N2—C11—C12 | 111.35 (7) |
| C10—N2—C11 | 120.09 (6) | N2—C11—H11A | 109.4 |
| C15—N2—C11 | 115.73 (6) | C12—C11—H11A | 109.4 |
| C2—C1—C6 | 122.55 (7) | N2—C11—H11B | 109.4 |
| C2—C1—H1A | 118.7 | C12—C11—H11B | 109.4 |
| C6—C1—H1A | 118.7 | H11A—C11—H11B | 108.0 |
| C1—C2—C3 | 118.91 (7) | C11—C12—C13 | 111.84 (7) |
| C1—C2—H2A | 120.5 | C11—C12—H12A | 109.2 |
| C3—C2—H2A | 120.5 | C13—C12—H12A | 109.2 |
| C4—C3—C2 | 121.44 (7) | C11—C12—H12B | 109.2 |
| C4—C3—Cl1 | 119.28 (6) | C13—C12—H12B | 109.2 |
| C2—C3—Cl1 | 119.29 (6) | H12A—C12—H12B | 107.9 |
| C3—C4—C5 | 118.17 (7) | C14—C13—C12 | 109.79 (6) |
| C3—C4—H4A | 120.9 | C14—C13—H13A | 109.7 |
| C5—C4—H4A | 120.9 | C12—C13—H13A | 109.7 |
| C4—C5—C6 | 123.08 (7) | C14—C13—H13B | 109.7 |
| C4—C5—Cl2 | 116.79 (5) | C12—C13—H13B | 109.7 |
| C6—C5—Cl2 | 120.12 (6) | H13A—C13—H13B | 108.2 |
| C1—C6—C5 | 115.83 (7) | C13—C14—C15 | 110.80 (7) |
| C1—C6—C7 | 123.46 (7) | C13—C14—H14A | 109.5 |
| C5—C6—C7 | 120.64 (7) | C15—C14—H14A | 109.5 |
| C8—C7—C6 | 130.21 (7) | C13—C14—H14B | 109.5 |
| C8—C7—H7A | 114.9 | C15—C14—H14B | 109.5 |
| C6—C7—H7A | 114.9 | H14A—C14—H14B | 108.1 |
| C7—C8—C9 | 121.03 (7) | N2—C15—C14 | 110.69 (7) |
| C7—C8—S1 | 129.85 (6) | N2—C15—H15A | 109.5 |
| C9—C8—S1 | 109.10 (5) | C14—C15—H15A | 109.5 |
| O1—C9—N1 | 124.51 (7) | N2—C15—H15B | 109.5 |
| O1—C9—C8 | 122.08 (7) | C14—C15—H15B | 109.5 |
| N1—C9—C8 | 113.41 (6) | H15A—C15—H15B | 108.1 |
| N1—C10—N2 | 124.03 (7) | ||
| C6—C1—C2—C3 | 1.25 (12) | C7—C8—C9—O1 | 3.74 (12) |
| C1—C2—C3—C4 | 0.26 (12) | S1—C8—C9—O1 | −177.51 (7) |
| C1—C2—C3—Cl1 | −179.63 (6) | C7—C8—C9—N1 | −175.99 (7) |
| C2—C3—C4—C5 | −1.49 (12) | S1—C8—C9—N1 | 2.77 (8) |
| Cl1—C3—C4—C5 | 178.41 (6) | C9—N1—C10—N2 | −178.19 (8) |
| C3—C4—C5—C6 | 1.30 (12) | C9—N1—C10—S1 | 1.36 (9) |
| C3—C4—C5—Cl2 | −177.86 (6) | C15—N2—C10—N1 | −175.15 (8) |
| C2—C1—C6—C5 | −1.41 (12) | C11—N2—C10—N1 | −8.17 (12) |
| C2—C1—C6—C7 | 175.53 (8) | C15—N2—C10—S1 | 5.31 (11) |
| C4—C5—C6—C1 | 0.10 (11) | C11—N2—C10—S1 | 172.29 (6) |
| Cl2—C5—C6—C1 | 179.24 (6) | C8—S1—C10—N1 | 0.25 (7) |
| C4—C5—C6—C7 | −176.93 (7) | C8—S1—C10—N2 | 179.82 (7) |
| Cl2—C5—C6—C7 | 2.21 (10) | C10—N2—C11—C12 | 140.61 (8) |
| C1—C6—C7—C8 | 7.99 (13) | C15—N2—C11—C12 | −51.50 (10) |
| C5—C6—C7—C8 | −175.21 (8) | N2—C11—C12—C13 | 51.51 (10) |
| C6—C7—C8—C9 | −179.51 (7) | C11—C12—C13—C14 | −55.21 (10) |
| C6—C7—C8—S1 | 2.03 (13) | C12—C13—C14—C15 | 56.91 (10) |
| C10—S1—C8—C7 | 177.01 (8) | C10—N2—C15—C14 | −139.08 (8) |
| C10—S1—C8—C9 | −1.60 (5) | C11—N2—C15—C14 | 53.41 (10) |
| C10—N1—C9—O1 | 177.67 (8) | C13—C14—C15—N2 | −55.37 (9) |
| C10—N1—C9—C8 | −2.61 (9) |
| H··· | ||||
| C1—H1A···S1 | 0.95 | 2.49 | 3.2260 (8) | 134 |
| C4—H4A···O1i | 0.95 | 2.40 | 3.3080 (9) | 160 |
| C15—H15A···O1ii | 0.99 | 2.57 | 3.2778 (11) | 129 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1 | 0.95 | 2.49 | 3.2260 (8) | 134 |
| C4—H4 | 0.95 | 2.40 | 3.3080 (9) | 160 |
| C15—H15 | 0.99 | 2.57 | 3.2778 (11) | 129 |
Symmetry codes: (i) ; (ii) .