| Literature DB >> 22219853 |
Hendrik G Visser, Andreas Roodt, Amanda-Lee Volmink, Gerdus Kemp.
Abstract
In the title compound, [Re(C(5)H(4)F(3)O(2))(C(5)H(5)N)(CO)(3)], the Re(I) atom is six-coordinated owing to bonding by three carbonyl ligands arranged in a fac configuration, two O atoms from the bidentate 1,1,1-trifluoro-acetyl-acetonate ligand and an N atom from a pyridine ligand. In the crystal, the mol-ecules pack in layers, diagonally, in a head-to-tail fashion across the ab plane. These layers are stabilsed by inter-molecular C-H⋯O and C-H⋯F hydrogen bonds.Entities:
Year: 2011 PMID: 22219853 PMCID: PMC3247548 DOI: 10.1107/S160053681104476X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Re(C5H4F3O2)(C5H5N)(CO)3] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 7262 reflections |
| θ = 2.7–28.2° | |
| µ = 8.22 mm−1 | |
| β = 103.271 (5)° | Needle, yellow |
| 0.15 × 0.1 × 0.03 mm | |
| Bruker X8 APEXII 4K Kappa CCD diffractometer | 3603 independent reflections |
| Radiation source: fine-focus sealed tube | 3104 reflections with |
| graphite | |
| φ and ω scans | θmax = 28°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 17351 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3603 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 1.43 e Å−3 |
| 0 restraints | Δρmin = −1.09 e Å−3 |
| Experimental. The intensity data were collected on a Bruker X8 ApexII 4 K Kappa CCD diffractometer using an exposure time of 40 s/frame. A total of 1709 frames were collected with a frame width of 0.5° covering up to θ = 28.39° with 99.9% completeness accomplished. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3352 (3) | 0.1319 (6) | 0.0313 (3) | 0.0209 (9) | |
| C2 | 0.3897 (3) | 0.2909 (6) | 0.0641 (3) | 0.0233 (9) | |
| H2 | 0.436 | 0.3153 | 0.0341 | 0.028* | |
| C3 | 0.3793 (3) | 0.4120 (6) | 0.1371 (3) | 0.0211 (9) | |
| C4 | 0.3568 (3) | 0.0060 (7) | −0.0476 (3) | 0.0289 (10) | |
| H4A | 0.3044 | −0.0147 | −0.0978 | 0.043* | |
| H4B | 0.3791 | −0.1148 | −0.0199 | 0.043* | |
| H4C | 0.4006 | 0.0677 | −0.0751 | 0.043* | |
| C5 | 0.4426 (3) | 0.5780 (7) | 0.1659 (4) | 0.0292 (10) | |
| C11 | 0.2715 (3) | 0.0553 (6) | 0.2774 (3) | 0.0224 (9) | |
| C12 | 0.1608 (3) | 0.3619 (6) | 0.2583 (3) | 0.0193 (8) | |
| C13 | 0.1142 (3) | 0.0508 (6) | 0.1529 (3) | 0.0178 (8) | |
| C21 | 0.1734 (3) | 0.5963 (6) | 0.0479 (3) | 0.0189 (8) | |
| H21 | 0.2129 | 0.6478 | 0.1015 | 0.023* | |
| C22 | 0.1372 (3) | 0.7145 (5) | −0.0285 (3) | 0.0205 (9) | |
| H22 | 0.1524 | 0.8436 | −0.0264 | 0.025* | |
| C23 | 0.0777 (3) | 0.6403 (6) | −0.1093 (3) | 0.0205 (9) | |
| H23 | 0.0527 | 0.718 | −0.1621 | 0.025* | |
| C24 | 0.0567 (3) | 0.4488 (6) | −0.1089 (3) | 0.0187 (8) | |
| H24 | 0.0164 | 0.3954 | −0.1613 | 0.022* | |
| C25 | 0.0959 (3) | 0.3368 (6) | −0.0305 (3) | 0.0178 (8) | |
| H25 | 0.0819 | 0.2072 | −0.0318 | 0.021* | |
| N1 | 0.1538 (2) | 0.4066 (5) | 0.0481 (2) | 0.0149 (7) | |
| O1 | 0.26931 (19) | 0.0826 (4) | 0.0638 (2) | 0.0193 (6) | |
| O2 | 0.32142 (19) | 0.4095 (4) | 0.1875 (2) | 0.0192 (6) | |
| O11 | 0.3032 (2) | −0.0437 (5) | 0.3404 (2) | 0.0356 (8) | |
| O12 | 0.1301 (2) | 0.4540 (4) | 0.3090 (2) | 0.0274 (7) | |
| O13 | 0.0548 (2) | −0.0508 (4) | 0.1444 (2) | 0.0237 (7) | |
| F1 | 0.4843 (2) | 0.5667 (5) | 0.2568 (2) | 0.0587 (10) | |
| F2 | 0.3971 (3) | 0.7446 (4) | 0.1556 (3) | 0.0615 (11) | |
| F3 | 0.5014 (2) | 0.5958 (6) | 0.1124 (3) | 0.0682 (11) | |
| Re1 | 0.213272 (11) | 0.21860 (2) | 0.171210 (11) | 0.01468 (6) |
| C1 | 0.023 (2) | 0.020 (2) | 0.019 (2) | 0.0079 (17) | 0.0038 (17) | 0.0041 (17) |
| C2 | 0.017 (2) | 0.031 (2) | 0.024 (2) | −0.0022 (18) | 0.0096 (19) | 0.0017 (18) |
| C3 | 0.017 (2) | 0.022 (2) | 0.024 (2) | −0.0005 (17) | 0.0029 (18) | 0.0071 (17) |
| C4 | 0.032 (3) | 0.029 (2) | 0.029 (2) | 0.005 (2) | 0.015 (2) | −0.0023 (19) |
| C5 | 0.026 (3) | 0.031 (2) | 0.033 (3) | −0.010 (2) | 0.011 (2) | −0.001 (2) |
| C11 | 0.022 (2) | 0.020 (2) | 0.025 (2) | −0.0016 (17) | 0.0051 (19) | −0.0013 (17) |
| C12 | 0.022 (2) | 0.0168 (19) | 0.020 (2) | −0.0029 (16) | 0.0072 (17) | 0.0033 (16) |
| C13 | 0.024 (2) | 0.0153 (19) | 0.015 (2) | 0.0023 (16) | 0.0068 (17) | −0.0007 (15) |
| C21 | 0.021 (2) | 0.0140 (18) | 0.022 (2) | −0.0033 (16) | 0.0064 (18) | −0.0050 (16) |
| C22 | 0.025 (2) | 0.0113 (17) | 0.027 (2) | −0.0011 (16) | 0.0108 (19) | −0.0009 (16) |
| C23 | 0.026 (2) | 0.0166 (19) | 0.020 (2) | 0.0018 (17) | 0.0068 (18) | 0.0042 (16) |
| C24 | 0.020 (2) | 0.021 (2) | 0.015 (2) | 0.0006 (16) | 0.0035 (17) | −0.0022 (15) |
| C25 | 0.022 (2) | 0.0154 (17) | 0.017 (2) | −0.0015 (16) | 0.0072 (17) | −0.0024 (16) |
| N1 | 0.0179 (18) | 0.0149 (15) | 0.0124 (16) | −0.0004 (13) | 0.0049 (14) | −0.0005 (12) |
| O1 | 0.0229 (16) | 0.0155 (13) | 0.0214 (15) | 0.0009 (12) | 0.0093 (13) | −0.0006 (11) |
| O2 | 0.0173 (15) | 0.0203 (14) | 0.0205 (15) | −0.0051 (11) | 0.0056 (12) | −0.0016 (12) |
| O11 | 0.039 (2) | 0.0347 (19) | 0.0300 (19) | 0.0023 (15) | 0.0004 (16) | 0.0119 (15) |
| O12 | 0.036 (2) | 0.0215 (15) | 0.0304 (18) | 0.0001 (13) | 0.0198 (15) | −0.0045 (13) |
| O13 | 0.0219 (17) | 0.0196 (15) | 0.0309 (17) | −0.0074 (13) | 0.0089 (14) | −0.0033 (13) |
| F1 | 0.059 (2) | 0.057 (2) | 0.050 (2) | −0.0246 (18) | −0.0092 (18) | −0.0007 (17) |
| F2 | 0.050 (2) | 0.0276 (16) | 0.104 (3) | −0.0086 (15) | 0.011 (2) | 0.0036 (18) |
| F3 | 0.060 (2) | 0.070 (2) | 0.088 (3) | −0.034 (2) | 0.045 (2) | −0.019 (2) |
| Re1 | 0.01714 (10) | 0.01195 (8) | 0.01581 (9) | −0.00153 (6) | 0.00557 (6) | −0.00083 (6) |
| C1—O1 | 1.263 (5) | C13—O13 | 1.150 (5) |
| C1—C2 | 1.409 (6) | C13—Re1 | 1.906 (4) |
| C1—C4 | 1.513 (6) | C21—N1 | 1.360 (5) |
| C2—C3 | 1.369 (6) | C21—C22 | 1.370 (6) |
| C2—H2 | 0.93 | C21—H21 | 0.93 |
| C3—O2 | 1.269 (5) | C22—C23 | 1.392 (6) |
| C3—C5 | 1.514 (6) | C22—H22 | 0.93 |
| C4—H4A | 0.96 | C23—C24 | 1.377 (6) |
| C4—H4B | 0.96 | C23—H23 | 0.93 |
| C4—H4C | 0.96 | C24—C25 | 1.376 (6) |
| C5—F1 | 1.298 (6) | C24—H24 | 0.93 |
| C5—F3 | 1.317 (5) | C25—N1 | 1.347 (5) |
| C5—F2 | 1.353 (6) | C25—H25 | 0.93 |
| C11—O11 | 1.144 (5) | N1—Re1 | 2.202 (3) |
| C11—Re1 | 1.932 (5) | O1—Re1 | 2.135 (3) |
| C12—O12 | 1.143 (5) | O2—Re1 | 2.117 (3) |
| C12—Re1 | 1.906 (4) | ||
| O1—C1—C2 | 125.0 (4) | C24—C23—C22 | 118.2 (4) |
| O1—C1—C4 | 116.3 (4) | C24—C23—H23 | 120.9 |
| C2—C1—C4 | 118.7 (4) | C22—C23—H23 | 120.9 |
| C3—C2—C1 | 124.6 (4) | C25—C24—C23 | 119.6 (4) |
| C3—C2—H2 | 117.7 | C25—C24—H24 | 120.2 |
| C1—C2—H2 | 117.7 | C23—C24—H24 | 120.2 |
| O2—C3—C2 | 129.2 (4) | N1—C25—C24 | 122.9 (4) |
| O2—C3—C5 | 111.3 (4) | N1—C25—H25 | 118.6 |
| C2—C3—C5 | 119.5 (4) | C24—C25—H25 | 118.6 |
| C1—C4—H4A | 109.5 | C25—N1—C21 | 117.3 (3) |
| C1—C4—H4B | 109.5 | C25—N1—Re1 | 120.8 (3) |
| H4A—C4—H4B | 109.5 | C21—N1—Re1 | 121.9 (3) |
| C1—C4—H4C | 109.5 | C1—O1—Re1 | 129.3 (3) |
| H4A—C4—H4C | 109.5 | C3—O2—Re1 | 126.7 (3) |
| H4B—C4—H4C | 109.5 | C12—Re1—C13 | 87.55 (17) |
| F1—C5—F3 | 108.3 (4) | C12—Re1—C11 | 90.32 (18) |
| F1—C5—F2 | 106.8 (4) | C13—Re1—C11 | 87.88 (18) |
| F3—C5—F2 | 105.9 (4) | C12—Re1—O2 | 92.70 (14) |
| F1—C5—C3 | 111.4 (4) | C13—Re1—O2 | 178.20 (14) |
| F3—C5—C3 | 114.4 (4) | C11—Re1—O2 | 93.89 (15) |
| F2—C5—C3 | 109.7 (4) | C12—Re1—O1 | 174.14 (14) |
| O11—C11—Re1 | 177.7 (4) | C13—Re1—O1 | 94.59 (14) |
| O12—C12—Re1 | 177.4 (3) | C11—Re1—O1 | 95.20 (15) |
| O13—C13—Re1 | 178.3 (4) | O2—Re1—O1 | 84.99 (11) |
| N1—C21—C22 | 122.5 (4) | C12—Re1—N1 | 91.68 (15) |
| N1—C21—H21 | 118.8 | C13—Re1—N1 | 94.55 (15) |
| C22—C21—H21 | 118.8 | C11—Re1—N1 | 176.91 (15) |
| C21—C22—C23 | 119.6 (4) | O2—Re1—N1 | 83.67 (12) |
| C21—C22—H22 | 120.2 | O1—Re1—N1 | 82.72 (11) |
| C23—C22—H22 | 120.2 |
| H··· | ||||
| C2—H2···F3i | 0.93 | 2.55 | 3.407 (6) | 153. |
| C22—H22···O1ii | 0.93 | 2.58 | 3.360 (5) | 142 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯F3i | 0.93 | 2.55 | 3.407 (6) | 153 |
| C22—H22⋯O1ii | 0.93 | 2.58 | 3.360 (5) | 142 |
Symmetry codes: (i) ; (ii) .