Literature DB >> 22219853

fac-Tricarbon-yl(pyridine-κN)(1,1,1-trifluoro-acetyl-acetonato-κO,O')rhenium(I).

Hendrik G Visser, Andreas Roodt, Amanda-Lee Volmink, Gerdus Kemp.   

Abstract

In the title compound, [Re(C(5)H(4)F(3)O(2))(C(5)H(5)N)(CO)(3)], the Re(I) atom is six-coordinated owing to bonding by three carbonyl ligands arranged in a fac configuration, two O atoms from the bidentate 1,1,1-trifluoro-acetyl-acetonate ligand and an N atom from a pyridine ligand. In the crystal, the mol-ecules pack in layers, diagonally, in a head-to-tail fashion across the ab plane. These layers are stabilsed by inter-molecular C-H⋯O and C-H⋯F hydrogen bonds.

Entities:  

Year:  2011        PMID: 22219853      PMCID: PMC3247548          DOI: 10.1107/S160053681104476X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the Re(I)-tricarbonyl synthon, see: Alberto et al. (1996 ▶). For related rhenium–tricarbonyl complexes, see: Brink et al. (2009 ▶, 2011 ▶); Mundwiler et al. (2004 ▶); Schutte et al. (2010 ▶). For a review on structurereactivity relationships, see: Roodt et al. (2011 ▶).

Experimental

Crystal data

[Re(C5H4F3O2)(C5H5N)(CO)3] M = 502.41 Monoclinic, a = 15.561 (2) Å b = 6.982 (3) Å c = 14.082 (5) Å β = 103.271 (5)° V = 1489.1 (9) Å3 Z = 4 Mo Kα radiation μ = 8.22 mm−1 T = 100 K 0.15 × 0.10 × 0.03 mm

Data collection

Bruker X8 APEXII 4K Kappa CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.328, T max = 0.778 17351 measured reflections 3603 independent reflections 3104 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.059 S = 1.06 3603 reflections 209 parameters H-atom parameters constrained Δρmax = 1.43 e Å−3 Δρmin = −1.09 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681104476X/ng5257sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104476X/ng5257Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Re(C5H4F3O2)(C5H5N)(CO)3]F(000) = 944
Mr = 502.41Dx = 2.241 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7262 reflections
a = 15.561 (2) Åθ = 2.7–28.2°
b = 6.982 (3) ŵ = 8.22 mm1
c = 14.082 (5) ÅT = 100 K
β = 103.271 (5)°Needle, yellow
V = 1489.1 (9) Å30.15 × 0.1 × 0.03 mm
Z = 4
Bruker X8 APEXII 4K Kappa CCD diffractometer3603 independent reflections
Radiation source: fine-focus sealed tube3104 reflections with I > 2σ(I)
graphiteRint = 0.040
φ and ω scansθmax = 28°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −20→20
Tmin = 0.328, Tmax = 0.778k = −9→9
17351 measured reflectionsl = −18→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.059H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0265P)2 + 2.5868P] where P = (Fo2 + 2Fc2)/3
3603 reflections(Δ/σ)max = 0.001
209 parametersΔρmax = 1.43 e Å3
0 restraintsΔρmin = −1.09 e Å3
Experimental. The intensity data were collected on a Bruker X8 ApexII 4 K Kappa CCD diffractometer using an exposure time of 40 s/frame. A total of 1709 frames were collected with a frame width of 0.5° covering up to θ = 28.39° with 99.9% completeness accomplished.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3352 (3)0.1319 (6)0.0313 (3)0.0209 (9)
C20.3897 (3)0.2909 (6)0.0641 (3)0.0233 (9)
H20.4360.31530.03410.028*
C30.3793 (3)0.4120 (6)0.1371 (3)0.0211 (9)
C40.3568 (3)0.0060 (7)−0.0476 (3)0.0289 (10)
H4A0.3044−0.0147−0.09780.043*
H4B0.3791−0.1148−0.01990.043*
H4C0.40060.0677−0.07510.043*
C50.4426 (3)0.5780 (7)0.1659 (4)0.0292 (10)
C110.2715 (3)0.0553 (6)0.2774 (3)0.0224 (9)
C120.1608 (3)0.3619 (6)0.2583 (3)0.0193 (8)
C130.1142 (3)0.0508 (6)0.1529 (3)0.0178 (8)
C210.1734 (3)0.5963 (6)0.0479 (3)0.0189 (8)
H210.21290.64780.10150.023*
C220.1372 (3)0.7145 (5)−0.0285 (3)0.0205 (9)
H220.15240.8436−0.02640.025*
C230.0777 (3)0.6403 (6)−0.1093 (3)0.0205 (9)
H230.05270.718−0.16210.025*
C240.0567 (3)0.4488 (6)−0.1089 (3)0.0187 (8)
H240.01640.3954−0.16130.022*
C250.0959 (3)0.3368 (6)−0.0305 (3)0.0178 (8)
H250.08190.2072−0.03180.021*
N10.1538 (2)0.4066 (5)0.0481 (2)0.0149 (7)
O10.26931 (19)0.0826 (4)0.0638 (2)0.0193 (6)
O20.32142 (19)0.4095 (4)0.1875 (2)0.0192 (6)
O110.3032 (2)−0.0437 (5)0.3404 (2)0.0356 (8)
O120.1301 (2)0.4540 (4)0.3090 (2)0.0274 (7)
O130.0548 (2)−0.0508 (4)0.1444 (2)0.0237 (7)
F10.4843 (2)0.5667 (5)0.2568 (2)0.0587 (10)
F20.3971 (3)0.7446 (4)0.1556 (3)0.0615 (11)
F30.5014 (2)0.5958 (6)0.1124 (3)0.0682 (11)
Re10.213272 (11)0.21860 (2)0.171210 (11)0.01468 (6)
U11U22U33U12U13U23
C10.023 (2)0.020 (2)0.019 (2)0.0079 (17)0.0038 (17)0.0041 (17)
C20.017 (2)0.031 (2)0.024 (2)−0.0022 (18)0.0096 (19)0.0017 (18)
C30.017 (2)0.022 (2)0.024 (2)−0.0005 (17)0.0029 (18)0.0071 (17)
C40.032 (3)0.029 (2)0.029 (2)0.005 (2)0.015 (2)−0.0023 (19)
C50.026 (3)0.031 (2)0.033 (3)−0.010 (2)0.011 (2)−0.001 (2)
C110.022 (2)0.020 (2)0.025 (2)−0.0016 (17)0.0051 (19)−0.0013 (17)
C120.022 (2)0.0168 (19)0.020 (2)−0.0029 (16)0.0072 (17)0.0033 (16)
C130.024 (2)0.0153 (19)0.015 (2)0.0023 (16)0.0068 (17)−0.0007 (15)
C210.021 (2)0.0140 (18)0.022 (2)−0.0033 (16)0.0064 (18)−0.0050 (16)
C220.025 (2)0.0113 (17)0.027 (2)−0.0011 (16)0.0108 (19)−0.0009 (16)
C230.026 (2)0.0166 (19)0.020 (2)0.0018 (17)0.0068 (18)0.0042 (16)
C240.020 (2)0.021 (2)0.015 (2)0.0006 (16)0.0035 (17)−0.0022 (15)
C250.022 (2)0.0154 (17)0.017 (2)−0.0015 (16)0.0072 (17)−0.0024 (16)
N10.0179 (18)0.0149 (15)0.0124 (16)−0.0004 (13)0.0049 (14)−0.0005 (12)
O10.0229 (16)0.0155 (13)0.0214 (15)0.0009 (12)0.0093 (13)−0.0006 (11)
O20.0173 (15)0.0203 (14)0.0205 (15)−0.0051 (11)0.0056 (12)−0.0016 (12)
O110.039 (2)0.0347 (19)0.0300 (19)0.0023 (15)0.0004 (16)0.0119 (15)
O120.036 (2)0.0215 (15)0.0304 (18)0.0001 (13)0.0198 (15)−0.0045 (13)
O130.0219 (17)0.0196 (15)0.0309 (17)−0.0074 (13)0.0089 (14)−0.0033 (13)
F10.059 (2)0.057 (2)0.050 (2)−0.0246 (18)−0.0092 (18)−0.0007 (17)
F20.050 (2)0.0276 (16)0.104 (3)−0.0086 (15)0.011 (2)0.0036 (18)
F30.060 (2)0.070 (2)0.088 (3)−0.034 (2)0.045 (2)−0.019 (2)
Re10.01714 (10)0.01195 (8)0.01581 (9)−0.00153 (6)0.00557 (6)−0.00083 (6)
C1—O11.263 (5)C13—O131.150 (5)
C1—C21.409 (6)C13—Re11.906 (4)
C1—C41.513 (6)C21—N11.360 (5)
C2—C31.369 (6)C21—C221.370 (6)
C2—H20.93C21—H210.93
C3—O21.269 (5)C22—C231.392 (6)
C3—C51.514 (6)C22—H220.93
C4—H4A0.96C23—C241.377 (6)
C4—H4B0.96C23—H230.93
C4—H4C0.96C24—C251.376 (6)
C5—F11.298 (6)C24—H240.93
C5—F31.317 (5)C25—N11.347 (5)
C5—F21.353 (6)C25—H250.93
C11—O111.144 (5)N1—Re12.202 (3)
C11—Re11.932 (5)O1—Re12.135 (3)
C12—O121.143 (5)O2—Re12.117 (3)
C12—Re11.906 (4)
O1—C1—C2125.0 (4)C24—C23—C22118.2 (4)
O1—C1—C4116.3 (4)C24—C23—H23120.9
C2—C1—C4118.7 (4)C22—C23—H23120.9
C3—C2—C1124.6 (4)C25—C24—C23119.6 (4)
C3—C2—H2117.7C25—C24—H24120.2
C1—C2—H2117.7C23—C24—H24120.2
O2—C3—C2129.2 (4)N1—C25—C24122.9 (4)
O2—C3—C5111.3 (4)N1—C25—H25118.6
C2—C3—C5119.5 (4)C24—C25—H25118.6
C1—C4—H4A109.5C25—N1—C21117.3 (3)
C1—C4—H4B109.5C25—N1—Re1120.8 (3)
H4A—C4—H4B109.5C21—N1—Re1121.9 (3)
C1—C4—H4C109.5C1—O1—Re1129.3 (3)
H4A—C4—H4C109.5C3—O2—Re1126.7 (3)
H4B—C4—H4C109.5C12—Re1—C1387.55 (17)
F1—C5—F3108.3 (4)C12—Re1—C1190.32 (18)
F1—C5—F2106.8 (4)C13—Re1—C1187.88 (18)
F3—C5—F2105.9 (4)C12—Re1—O292.70 (14)
F1—C5—C3111.4 (4)C13—Re1—O2178.20 (14)
F3—C5—C3114.4 (4)C11—Re1—O293.89 (15)
F2—C5—C3109.7 (4)C12—Re1—O1174.14 (14)
O11—C11—Re1177.7 (4)C13—Re1—O194.59 (14)
O12—C12—Re1177.4 (3)C11—Re1—O195.20 (15)
O13—C13—Re1178.3 (4)O2—Re1—O184.99 (11)
N1—C21—C22122.5 (4)C12—Re1—N191.68 (15)
N1—C21—H21118.8C13—Re1—N194.55 (15)
C22—C21—H21118.8C11—Re1—N1176.91 (15)
C21—C22—C23119.6 (4)O2—Re1—N183.67 (12)
C21—C22—H22120.2O1—Re1—N182.72 (11)
C23—C22—H22120.2
D—H···AD—HH···AD···AD—H···A
C2—H2···F3i0.932.553.407 (6)153.
C22—H22···O1ii0.932.583.360 (5)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯F3i0.932.553.407 (6)153
C22—H22⋯O1ii0.932.583.360 (5)142

Symmetry codes: (i) ; (ii) .

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