Literature DB >> 22219810

[1-tert-Butyl-3-(pyridin-2-ylmethyl-κN)imidazol-2-yl-idene-κC]carbonyl-dichlorido(dimethyl sulfoxide-κS)ruthenium(II).

Yong Cheng1, Wen-Qian Hua, Ying-Hua Zhou.   

Abstract

In the title complex, [RuCl(2)(C(13)H(17)N(3))(C(2)H(6)OS)(CO)], the coordination environment around the Ru atom is slightly distorted octa-hedral. The Cl atoms are mutually trans to the dimethyl sulfoxide ligand and the imidazole carbene C atom, respectively. The carbonyl ligand is located trans to the pyridine N atom.

Entities:  

Year:  2011        PMID: 22219810      PMCID: PMC3246990          DOI: 10.1107/S1600536811042590

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to N-heterocyclic carbene (NHC) complexes, see: Hahn et al. (2006 ▶); Lee et al. (2007 ▶); Mas-Marza et al. (2005 ▶); Kaufhold et al. (2008 ▶); Araki et al. (2008 ▶); Son et al. (2004 ▶); Poyatos et al. (2006 ▶). For our previous work on RuNHC complexes, see: Cheng, Sun et al. (2009 ▶); Cheng, Xu et al. (2009 ▶).

Experimental

Crystal data

[RuCl2(C13H17N3)(C2H6OS)(CO)] M = 493.40 Orthorhombic, a = 14.3297 (14) Å b = 15.7428 (16) Å c = 17.1867 (16) Å V = 3877.1 (7) Å3 Z = 8 Mo Kα radiation μ = 1.21 mm−1 T = 291 K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.74, T max = 0.79 20132 measured reflections 3815 independent reflections 3401 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.110 S = 1.06 3815 reflections 231 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −1.30 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042590/zb2017sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042590/zb2017Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[RuCl2(C13H17N3)(C2H6OS)(CO)]F(000) = 2000
Mr = 493.40Dx = 1.691 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2216 reflections
a = 14.3297 (14) Åθ = 2.3–23.2°
b = 15.7428 (16) ŵ = 1.21 mm1
c = 17.1867 (16) ÅT = 291 K
V = 3877.1 (7) Å3Cuboid, yellow
Z = 80.26 × 0.22 × 0.20 mm
Bruker SMART APEX CCD diffractometer3815 independent reflections
Radiation source: sealed tube3401 reflections with I > 2σ(I)
graphiteRint = 0.044
phi and ω scansθmax = 26.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −16→17
Tmin = 0.74, Tmax = 0.79k = −12→19
20132 measured reflectionsl = −17→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.07P)2 + 1.99P] where P = (Fo2 + 2Fc2)/3
3815 reflections(Δ/σ)max < 0.001
231 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −1.30 e Å3
Experimental. The single crystals was mounted on a glass fibre with silicon grease. Diffraction data were collected on a Bruker SMART Apex CCD diffractometer using graphite-monochromated MoKa (l =0.71073 Å) radiation and corrllected for absorption using SADABS program.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7924 (2)0.1922 (3)0.4198 (2)0.0412 (8)
H10.78840.13780.44040.049*
C20.8640 (3)0.2469 (3)0.4455 (3)0.0460 (10)
H20.90690.22920.48270.055*
C30.8685 (3)0.3279 (3)0.4137 (3)0.0504 (10)
H30.91570.36490.42910.060*
C40.8029 (2)0.3541 (2)0.3591 (2)0.0374 (8)
H40.80460.40850.33800.045*
C50.7357 (2)0.2968 (2)0.33735 (19)0.0307 (7)
C60.6614 (3)0.3243 (2)0.2791 (2)0.0389 (8)
H6A0.60100.32490.30470.047*
H6B0.67480.38170.26170.047*
C70.6571 (3)0.3016 (3)0.1371 (2)0.0487 (10)
H70.66250.35860.12330.058*
C80.6478 (3)0.2344 (3)0.0883 (2)0.0485 (10)
H80.64650.23660.03430.058*
C90.6444 (2)0.1815 (2)0.21162 (19)0.0276 (6)
C100.6203 (3)0.0776 (3)0.0934 (2)0.0403 (8)
C110.6801 (3)0.0038 (3)0.1278 (3)0.0501 (10)
H11A0.74510.01620.12080.075*
H11B0.6650−0.04830.10160.075*
H11C0.6670−0.00200.18240.075*
C120.5139 (3)0.0597 (3)0.1032 (3)0.0512 (10)
H12A0.49760.06280.15730.077*
H12B0.49980.00400.08370.077*
H12C0.47890.10130.07460.077*
C130.6446 (3)0.0843 (3)0.0066 (2)0.0577 (12)
H13A0.60020.1206−0.01880.087*
H13B0.64250.0288−0.01660.087*
H13C0.70610.10760.00080.087*
C140.4160 (3)0.1148 (3)0.3901 (3)0.0518 (11)
H14A0.44410.07820.42800.078*
H14B0.39130.08120.34820.078*
H14C0.36640.14660.41390.078*
C150.4341 (3)0.2282 (3)0.2722 (3)0.0524 (10)
H15A0.37930.25590.29200.079*
H15B0.41580.18230.23870.079*
H15C0.47090.26820.24330.079*
C160.5656 (2)0.0265 (2)0.2880 (2)0.0351 (7)
Cl10.78532 (6)0.05000 (6)0.29450 (6)0.0388 (2)
Cl20.63074 (7)0.05755 (7)0.44994 (6)0.0496 (3)
N10.72873 (19)0.21741 (17)0.36515 (15)0.0303 (6)
N20.65692 (19)0.26818 (19)0.21148 (17)0.0325 (6)
N30.6403 (2)0.1616 (2)0.13376 (18)0.0364 (7)
O10.5227 (2)−0.03364 (19)0.27652 (19)0.0556 (8)
O20.51299 (19)0.25707 (19)0.40880 (16)0.0488 (7)
Ru10.636122 (18)0.119715 (16)0.318107 (15)0.02810 (12)
S10.50232 (6)0.18683 (6)0.35263 (5)0.0356 (2)
U11U22U33U12U13U23
C10.0356 (18)0.053 (2)0.0345 (18)0.0042 (16)−0.0116 (14)−0.0115 (16)
C20.041 (2)0.047 (2)0.050 (2)−0.0011 (16)−0.0079 (16)−0.0176 (19)
C30.043 (2)0.054 (2)0.054 (3)−0.0021 (18)−0.0030 (17)−0.020 (2)
C40.0343 (17)0.0377 (19)0.0402 (19)−0.0088 (15)0.0031 (14)−0.0128 (16)
C50.0319 (16)0.0288 (16)0.0316 (16)0.0009 (13)0.0054 (13)−0.0038 (13)
C60.0436 (19)0.0327 (18)0.040 (2)0.0098 (15)−0.0052 (16)−0.0053 (15)
C70.056 (2)0.049 (2)0.041 (2)−0.0112 (19)−0.0021 (18)0.0076 (18)
C80.066 (3)0.044 (2)0.036 (2)−0.0120 (19)−0.0048 (18)0.0055 (17)
C90.0219 (15)0.0351 (17)0.0259 (16)−0.0020 (12)−0.0013 (11)−0.0008 (13)
C100.0396 (19)0.051 (2)0.0300 (18)−0.0049 (17)−0.0043 (14)−0.0075 (16)
C110.035 (2)0.051 (2)0.064 (3)0.0041 (17)−0.0020 (18)−0.010 (2)
C120.034 (2)0.063 (3)0.057 (2)0.0003 (18)−0.0081 (17)−0.010 (2)
C130.068 (3)0.075 (3)0.030 (2)−0.009 (2)0.0055 (18)−0.010 (2)
C140.037 (2)0.063 (3)0.055 (3)−0.0163 (18)0.0153 (18)−0.011 (2)
C150.035 (2)0.066 (3)0.057 (2)0.0095 (18)−0.0167 (18)−0.002 (2)
C160.0285 (16)0.0331 (18)0.0437 (19)−0.0018 (14)−0.0075 (14)0.0018 (15)
Cl10.0302 (4)0.0355 (4)0.0508 (5)0.0019 (3)−0.0024 (3)−0.0006 (4)
Cl20.0601 (6)0.0520 (6)0.0366 (5)−0.0054 (4)−0.0026 (4)0.0137 (4)
N10.0292 (14)0.0306 (14)0.0309 (14)0.0006 (11)−0.0028 (10)−0.0047 (11)
N20.0327 (14)0.0343 (15)0.0306 (14)−0.0040 (12)−0.0035 (11)0.0037 (12)
N30.0383 (16)0.0379 (16)0.0331 (16)−0.0044 (12)−0.0029 (11)−0.0039 (13)
O10.0553 (17)0.0423 (16)0.069 (2)−0.0183 (14)−0.0067 (15)−0.0039 (14)
O20.0422 (14)0.0581 (17)0.0462 (15)−0.0040 (13)0.0044 (12)−0.0214 (13)
Ru10.02643 (17)0.02881 (18)0.02905 (18)−0.00223 (10)−0.00179 (9)0.00097 (10)
S10.0285 (4)0.0435 (5)0.0348 (4)−0.0005 (3)0.0018 (3)−0.0040 (4)
C1—N11.368 (4)C10—C121.560 (5)
C1—C21.409 (5)C11—H11A0.9600
C1—H10.9300C11—H11B0.9600
C2—C31.389 (6)C11—H11C0.9600
C2—H20.9300C12—H12A0.9600
C3—C41.391 (6)C12—H12B0.9600
C3—H30.9300C12—H12C0.9600
C4—C51.372 (5)C13—H13A0.9600
C4—H40.9300C13—H13B0.9600
C5—N11.341 (4)C13—H13C0.9600
C5—C61.526 (5)C14—S11.797 (4)
C6—N21.461 (4)C14—H14A0.9600
C6—H6A0.9700C14—H14B0.9600
C6—H6B0.9700C14—H14C0.9600
C7—C81.357 (6)C15—S11.815 (4)
C7—N21.383 (5)C15—H15A0.9600
C7—H70.9300C15—H15B0.9600
C8—N31.391 (5)C15—H15C0.9600
C8—H80.9300C16—O11.146 (4)
C9—N21.376 (4)C16—Ru11.855 (3)
C9—N31.376 (5)Cl1—Ru12.4372 (9)
C9—Ru12.076 (3)Cl2—Ru12.4692 (10)
C10—N31.521 (5)N1—Ru12.186 (3)
C10—C131.536 (5)O2—S11.476 (3)
C10—C111.560 (6)Ru1—S12.2682 (9)
N1—C1—C2121.6 (4)C10—C13—H13B109.5
N1—C1—H1119.2H13A—C13—H13B109.5
C2—C1—H1119.2C10—C13—H13C109.5
C3—C2—C1118.1 (4)H13A—C13—H13C109.5
C3—C2—H2120.9H13B—C13—H13C109.5
C1—C2—H2120.9S1—C14—H14A109.5
C2—C3—C4120.4 (4)S1—C14—H14B109.5
C2—C3—H3119.8H14A—C14—H14B109.5
C4—C3—H3119.8S1—C14—H14C109.5
C5—C4—C3117.5 (4)H14A—C14—H14C109.5
C5—C4—H4121.2H14B—C14—H14C109.5
C3—C4—H4121.2S1—C15—H15A109.5
N1—C5—C4124.7 (3)S1—C15—H15B109.5
N1—C5—C6116.5 (3)H15A—C15—H15B109.5
C4—C5—C6118.8 (3)S1—C15—H15C109.5
N2—C6—C5112.4 (3)H15A—C15—H15C109.5
N2—C6—H6A109.1H15B—C15—H15C109.5
C5—C6—H6A109.1O1—C16—Ru1173.5 (3)
N2—C6—H6B109.1C5—N1—C1117.7 (3)
C5—C6—H6B109.1C5—N1—Ru1124.7 (2)
H6A—C6—H6B107.9C1—N1—Ru1117.1 (2)
C8—C7—N2105.9 (4)C9—N2—C7112.3 (3)
C8—C7—H7127.1C9—N2—C6127.2 (3)
N2—C7—H7127.1C7—N2—C6120.3 (3)
C7—C8—N3107.7 (4)C9—N3—C8110.8 (3)
C7—C8—H8126.2C9—N3—C10130.5 (3)
N3—C8—H8126.2C8—N3—C10118.4 (3)
N2—C9—N3103.3 (3)C16—Ru1—C998.96 (14)
N2—C9—Ru1118.3 (2)C16—Ru1—N1171.94 (13)
N3—C9—Ru1138.4 (3)C9—Ru1—N187.79 (11)
N3—C10—C13109.9 (3)C16—Ru1—S188.94 (11)
N3—C10—C11111.8 (3)C9—Ru1—S193.48 (9)
C13—C10—C11107.2 (3)N1—Ru1—S195.09 (7)
N3—C10—C12107.0 (3)C16—Ru1—Cl194.29 (11)
C13—C10—C12109.8 (3)C9—Ru1—Cl190.81 (9)
C11—C10—C12111.2 (3)N1—Ru1—Cl181.13 (7)
C10—C11—H11A109.5S1—Ru1—Cl1174.18 (3)
C10—C11—H11B109.5C16—Ru1—Cl285.74 (12)
H11A—C11—H11B109.5C9—Ru1—Cl2175.13 (10)
C10—C11—H11C109.5N1—Ru1—Cl287.62 (8)
H11A—C11—H11C109.5S1—Ru1—Cl285.31 (4)
H11B—C11—H11C109.5Cl1—Ru1—Cl290.09 (3)
C10—C12—H12A109.5O2—S1—C14108.05 (19)
C10—C12—H12B109.5O2—S1—C15106.6 (2)
H12A—C12—H12B109.5C14—S1—C1597.4 (2)
C10—C12—H12C109.5O2—S1—Ru1115.63 (11)
H12A—C12—H12C109.5C14—S1—Ru1112.44 (15)
H12B—C12—H12C109.5C15—S1—Ru1115.05 (15)
C10—C13—H13A109.5
N1—C1—C2—C30.0 (6)C13—C10—N3—C819.2 (5)
C1—C2—C3—C41.0 (6)C11—C10—N3—C8138.1 (4)
C2—C3—C4—C5−1.1 (6)C12—C10—N3—C8−99.9 (4)
C3—C4—C5—N10.1 (5)N2—C9—Ru1—C16153.9 (2)
C3—C4—C5—C6178.5 (3)N3—C9—Ru1—C16−25.5 (4)
N1—C5—C6—N2−56.8 (4)N2—C9—Ru1—N1−30.6 (2)
C4—C5—C6—N2124.7 (3)N3—C9—Ru1—N1150.1 (3)
N2—C7—C8—N31.1 (5)N2—C9—Ru1—S164.4 (2)
C4—C5—N1—C10.9 (5)N3—C9—Ru1—S1−115.0 (3)
C6—C5—N1—C1−177.5 (3)N2—C9—Ru1—Cl1−111.7 (2)
C4—C5—N1—Ru1−170.0 (3)N3—C9—Ru1—Cl169.0 (3)
C6—C5—N1—Ru111.6 (4)C5—N1—Ru1—C926.9 (3)
C2—C1—N1—C5−0.9 (5)C1—N1—Ru1—C9−144.0 (3)
C2—C1—N1—Ru1170.7 (3)C5—N1—Ru1—S1−66.4 (3)
N3—C9—N2—C72.2 (4)C1—N1—Ru1—S1122.7 (2)
Ru1—C9—N2—C7−177.3 (3)C5—N1—Ru1—Cl1118.1 (3)
N3—C9—N2—C6176.7 (3)C1—N1—Ru1—Cl1−52.9 (2)
Ru1—C9—N2—C6−2.8 (4)C5—N1—Ru1—Cl2−151.5 (3)
C8—C7—N2—C9−2.1 (4)C1—N1—Ru1—Cl237.6 (2)
C8—C7—N2—C6−177.0 (3)C16—Ru1—S1—O2158.69 (19)
C5—C6—N2—C955.1 (5)C9—Ru1—S1—O2−102.40 (17)
C5—C6—N2—C7−130.8 (4)N1—Ru1—S1—O2−14.31 (16)
N2—C9—N3—C8−1.5 (4)Cl2—Ru1—S1—O272.87 (15)
Ru1—C9—N3—C8177.9 (3)C16—Ru1—S1—C1433.9 (2)
N2—C9—N3—C10−174.9 (3)C9—Ru1—S1—C14132.85 (19)
Ru1—C9—N3—C104.5 (6)N1—Ru1—S1—C14−139.06 (19)
C7—C8—N3—C90.3 (5)Cl2—Ru1—S1—C14−51.88 (17)
C7—C8—N3—C10174.6 (3)C16—Ru1—S1—C15−76.3 (2)
C13—C10—N3—C9−167.8 (3)C9—Ru1—S1—C1522.6 (2)
C11—C10—N3—C9−48.9 (5)N1—Ru1—S1—C15110.71 (19)
C12—C10—N3—C973.0 (5)Cl2—Ru1—S1—C15−162.11 (18)
  5 in total

1.  Synthesis, structures and catalytic activities of ruthenium(ii) carbonyl chloride complexes containing pyridine-functionalised N-heterocyclic carbenes.

Authors:  Yong Cheng; Hui-Jun Xu; Jia-Feng Sun; Yi-Zhi Li; Xue-Tai Chen; Zi-Ling Xue
Journal:  Dalton Trans       Date:  2009-07-22       Impact factor: 4.390

Review 2.  Heterocyclic carbenes.

Authors:  F Ekkehardt Hahn
Journal:  Angew Chem Int Ed Engl       Date:  2006-02-20       Impact factor: 15.336

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Coordination versatility of pyridine-functionalized N-heterocyclic carbenes: a detailed study of the different activation procedures. Characterization of new Rh and Ir compounds and study of their catalytic activity.

Authors:  Elena Mas-Marzá; Mercedes Sanaú; Eduardo Peris
Journal:  Inorg Chem       Date:  2005-12-26       Impact factor: 5.165

5.  Synthesis of Ru(II) complexes of N-heterocyclic carbenes and their promising photoluminescence properties in water.

Authors:  Seung Uk Son; Kang Hyun Park; Young-Shin Lee; Bo Yun Kim; Cheol Ho Choi; Myoung Soo Lah; Yun Hee Jang; Du-Jeon Jang; Young Keun Chung
Journal:  Inorg Chem       Date:  2004-11-01       Impact factor: 5.165

  5 in total

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