Literature DB >> 22219766

Bis(methyl xanthato)-κS;κS:S'-(triphenyl-phosphane-κP)palladium(II).

Reyna Reyes-Martínez1, Simón Hernández-Ortega, David Morales-Morales.   

Abstract

The title compound, [Pd(C(2)H(3)OS(2))(2)(C(18)H(15)P)], features a palladium complex with a triphenyl-phosphane ligand and two xanthate ligands, one of them coordinates in a bidentate and the other in a monodentate fashion, giving rise to a slightly distorted square-planar coordination of the Pd(II) ion. As a result of this difference in the coordination modes, the C-S bond lengths are different, viz. 1.687 (2) and 1.692 (2) Å in the bidentate ligand and 1.723 (2) Å in the monodentate ligand, whereas the non-coordinating S atom has a C-S distance of 1.649 (2) Å. The crystal packing is stabilized by C-H⋯O inter-actions.

Entities:  

Year:  2011        PMID: 22219766      PMCID: PMC3246946          DOI: 10.1107/S1600536811040487

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on xanthates, see: Karlin (2005 ▶); Friebolin et al. (2005 ▶). For crystal engineering, see: Tiekink (2003 ▶). For bond-length data, see: Allen (2002 ▶).

Experimental

Crystal data

[Pd(C2H3OS2)2(C18H15P)] M = 583.00 Triclinic, a = 9.5595 (10) Å b = 9.5883 (10) Å c = 14.4661 (16) Å α = 73.619 (1)° β = 87.492 (2)° γ = 69.617 (1)° V = 1190.3 (2) Å3 Z = 2 Mo Kα radiation μ = 1.22 mm−1 T = 298 K 0.30 × 0.22 × 0.20 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: analytical (SADABS, Bruker, 1999 ▶) T min = 0.712, T max = 0.817 9954 measured reflections 4371 independent reflections 4021 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.064 S = 1.10 4371 reflections 274 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.42 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: XP in SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811040487/bt5655sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811040487/bt5655Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pd(C2H3OS2)2(C18H15P)]Z = 2
Mr = 583.00F(000) = 588
Triclinic, P1Dx = 1.627 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.5595 (10) ÅCell parameters from 8044 reflections
b = 9.5883 (10) Åθ = 2.3–25.4°
c = 14.4661 (16) ŵ = 1.22 mm1
α = 73.619 (1)°T = 298 K
β = 87.492 (2)°Prism, orange
γ = 69.617 (1)°0.30 × 0.22 × 0.20 mm
V = 1190.3 (2) Å3
Bruker SMART APEX CCD area-detector diffractometer4371 independent reflections
Radiation source: fine-focus sealed tube4021 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 0.83 pixels mm-1θmax = 25.4°, θmin = 2.4°
ω scansh = −11→11
Absorption correction: analytical (SADABS, Bruker, 1999)k = −11→11
Tmin = 0.712, Tmax = 0.817l = −17→17
9954 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.025H-atom parameters constrained
wR(F2) = 0.064w = 1/[σ2(Fo2) + (0.0336P)2 + 0.178P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
4371 reflectionsΔρmax = 0.32 e Å3
274 parametersΔρmin = −0.42 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0063 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pd0.557109 (17)0.946630 (17)0.158062 (11)0.03533 (8)
S10.62793 (7)1.11131 (6)0.02530 (4)0.04484 (15)
S20.77698 (7)0.78738 (7)0.10997 (4)0.04619 (15)
S30.34534 (7)1.12011 (7)0.20223 (4)0.04483 (15)
S40.16108 (9)1.44896 (8)0.16359 (6)0.0674 (2)
P0.53719 (6)0.75832 (6)0.29129 (4)0.03699 (14)
C10.6235 (2)0.5585 (2)0.28557 (16)0.0402 (5)
C20.5382 (3)0.4710 (3)0.2782 (2)0.0540 (6)
H20.43460.51300.27790.065*
C30.6064 (3)0.3212 (3)0.2714 (2)0.0673 (8)
H30.54820.26330.26610.081*
C40.7577 (4)0.2585 (3)0.2723 (2)0.0650 (8)
H40.80270.15790.26760.078*
C50.8448 (3)0.3428 (3)0.2801 (2)0.0614 (7)
H50.94840.29920.28110.074*
C60.7775 (3)0.4931 (3)0.28646 (18)0.0511 (6)
H60.83640.55030.29140.061*
C70.6282 (3)0.7628 (3)0.39762 (16)0.0431 (5)
C80.6358 (3)0.9006 (3)0.40261 (19)0.0527 (6)
H80.59900.98930.35070.063*
C90.6979 (3)0.9080 (4)0.4844 (2)0.0683 (8)
H90.70101.00240.48760.082*
C100.7548 (3)0.7795 (4)0.5605 (2)0.0745 (9)
H100.79670.78560.61540.089*
C110.7498 (4)0.6417 (4)0.5555 (2)0.0845 (10)
H110.79050.55280.60670.101*
C120.6853 (4)0.6327 (3)0.4754 (2)0.0739 (9)
H120.68010.53840.47350.089*
C130.3460 (2)0.7770 (2)0.32140 (16)0.0409 (5)
C140.2973 (3)0.7726 (3)0.41336 (19)0.0536 (6)
H140.36350.75850.46320.064*
C150.1497 (3)0.7892 (4)0.4307 (2)0.0727 (9)
H150.11650.78750.49230.087*
C160.0524 (3)0.8082 (4)0.3579 (3)0.0754 (9)
H16−0.04660.81900.37010.090*
C170.1000 (3)0.8112 (3)0.2669 (2)0.0656 (8)
H170.03400.82190.21790.079*
C180.2455 (3)0.7983 (3)0.24803 (18)0.0521 (6)
H180.27660.80390.18570.063*
C190.7744 (2)0.9505 (3)0.02430 (16)0.0398 (5)
O200.87376 (17)0.95924 (18)−0.03937 (12)0.0483 (4)
C210.9931 (3)0.8175 (3)−0.0439 (2)0.0579 (7)
H21A1.04370.76370.01870.087*
H21B1.06290.8431−0.08940.087*
H21C0.95160.7522−0.06410.087*
C220.2955 (2)1.3103 (3)0.13247 (16)0.0414 (5)
O230.3687 (2)1.33360 (19)0.05373 (13)0.0590 (5)
C240.3206 (4)1.4853 (3)−0.0161 (2)0.0767 (9)
H24A0.21891.5127−0.03850.115*
H24B0.38351.4834−0.06970.115*
H24C0.32761.56060.01370.115*
U11U22U33U12U13U23
Pd0.03777 (12)0.02838 (11)0.03679 (11)−0.01107 (8)0.00156 (7)−0.00519 (7)
S10.0442 (3)0.0308 (3)0.0494 (3)−0.0087 (2)0.0092 (3)−0.0027 (2)
S20.0444 (3)0.0313 (3)0.0524 (3)−0.0074 (2)0.0049 (3)−0.0038 (3)
S30.0462 (3)0.0334 (3)0.0465 (3)−0.0086 (2)0.0072 (3)−0.0061 (2)
S40.0682 (5)0.0440 (4)0.0658 (4)0.0038 (3)0.0171 (4)−0.0105 (3)
P0.0415 (3)0.0315 (3)0.0367 (3)−0.0151 (2)−0.0002 (2)−0.0046 (2)
C10.0460 (12)0.0321 (11)0.0396 (12)−0.0144 (10)0.0015 (9)−0.0044 (9)
C20.0512 (14)0.0393 (13)0.0719 (17)−0.0182 (11)0.0005 (12)−0.0130 (12)
C30.0733 (19)0.0424 (15)0.092 (2)−0.0259 (14)−0.0023 (16)−0.0193 (15)
C40.079 (2)0.0354 (14)0.0713 (18)−0.0102 (14)0.0053 (15)−0.0130 (13)
C50.0541 (15)0.0444 (15)0.0676 (17)−0.0055 (12)0.0035 (13)−0.0033 (13)
C60.0478 (14)0.0423 (14)0.0576 (15)−0.0166 (11)−0.0018 (11)−0.0038 (11)
C70.0448 (12)0.0462 (13)0.0390 (12)−0.0183 (11)0.0016 (9)−0.0100 (10)
C80.0506 (14)0.0484 (14)0.0602 (15)−0.0137 (12)−0.0036 (12)−0.0208 (12)
C90.0618 (17)0.075 (2)0.076 (2)−0.0173 (15)−0.0012 (15)−0.0412 (17)
C100.0581 (17)0.118 (3)0.0530 (17)−0.0248 (18)0.0002 (13)−0.0404 (19)
C110.113 (3)0.084 (2)0.0465 (16)−0.032 (2)−0.0208 (17)−0.0012 (16)
C120.109 (2)0.0577 (17)0.0515 (16)−0.0359 (18)−0.0187 (16)0.0022 (13)
C130.0447 (12)0.0312 (11)0.0446 (12)−0.0152 (10)0.0043 (10)−0.0051 (9)
C140.0610 (16)0.0489 (14)0.0514 (14)−0.0208 (13)0.0104 (12)−0.0142 (12)
C150.0672 (19)0.075 (2)0.0714 (19)−0.0249 (16)0.0293 (16)−0.0181 (16)
C160.0468 (16)0.069 (2)0.099 (3)−0.0192 (15)0.0192 (17)−0.0101 (18)
C170.0473 (15)0.0649 (18)0.075 (2)−0.0190 (14)−0.0063 (14)−0.0050 (15)
C180.0465 (13)0.0534 (15)0.0492 (14)−0.0169 (12)0.0005 (11)−0.0042 (12)
C190.0379 (11)0.0373 (12)0.0426 (12)−0.0126 (10)−0.0004 (9)−0.0092 (10)
O200.0407 (9)0.0436 (9)0.0509 (9)−0.0084 (7)0.0091 (7)−0.0080 (8)
C210.0419 (13)0.0569 (16)0.0669 (17)−0.0056 (12)0.0112 (12)−0.0216 (14)
C220.0411 (12)0.0374 (12)0.0437 (12)−0.0111 (10)−0.0005 (10)−0.0111 (10)
O230.0658 (11)0.0359 (9)0.0562 (10)−0.0039 (8)0.0164 (9)−0.0036 (8)
C240.093 (2)0.0384 (15)0.0670 (19)−0.0032 (15)0.0225 (16)0.0050 (13)
Pd—P2.2924 (6)C9—H90.9300
Pd—S32.3267 (6)C10—C111.361 (5)
Pd—S22.3386 (6)C10—H100.9300
Pd—S12.3581 (6)C11—C121.373 (4)
S1—C191.687 (2)C11—H110.9300
S2—C191.692 (2)C12—H120.9300
S3—C221.723 (2)C13—C141.384 (3)
S4—C221.649 (2)C13—C181.386 (3)
P—C71.818 (2)C14—C151.384 (4)
P—C131.819 (2)C14—H140.9300
P—C11.827 (2)C15—C161.367 (5)
C1—C21.383 (3)C15—H150.9300
C1—C61.384 (3)C16—C171.369 (4)
C2—C31.386 (4)C16—H160.9300
C2—H20.9300C17—C181.375 (4)
C3—C41.359 (4)C17—H170.9300
C3—H30.9300C18—H180.9300
C4—C51.373 (4)C19—O201.301 (3)
C4—H40.9300O20—C211.455 (3)
C5—C61.387 (4)C21—H21A0.9600
C5—H50.9300C21—H21B0.9600
C6—H60.9300C21—H21C0.9600
C7—C81.371 (3)C22—O231.316 (3)
C7—C121.381 (3)O23—C241.447 (3)
C8—C91.377 (4)C24—H24A0.9600
C8—H80.9300C24—H24B0.9600
C9—C101.359 (4)C24—H24C0.9600
P—Pd—S388.08 (2)C10—C11—C12120.6 (3)
P—Pd—S295.32 (2)C10—C11—H11119.7
S3—Pd—S2175.72 (2)C12—C11—H11119.7
P—Pd—S1168.78 (2)C11—C12—C7120.3 (3)
S3—Pd—S1101.78 (2)C11—C12—H12119.8
S2—Pd—S174.60 (2)C7—C12—H12119.8
C19—S1—Pd85.06 (8)C14—C13—C18119.3 (2)
C19—S2—Pd85.56 (8)C14—C13—P122.88 (19)
C22—S3—Pd115.44 (8)C18—C13—P117.85 (18)
C7—P—C13105.95 (10)C15—C14—C13119.7 (3)
C7—P—C1104.63 (10)C15—C14—H14120.2
C13—P—C1104.52 (10)C13—C14—H14120.2
C7—P—Pd110.69 (8)C16—C15—C14120.4 (3)
C13—P—Pd114.35 (7)C16—C15—H15119.8
C1—P—Pd115.78 (7)C14—C15—H15119.8
C2—C1—C6118.7 (2)C15—C16—C17120.3 (3)
C2—C1—P121.55 (18)C15—C16—H16119.9
C6—C1—P119.78 (18)C17—C16—H16119.9
C1—C2—C3120.4 (2)C16—C17—C18120.0 (3)
C1—C2—H2119.8C16—C17—H17120.0
C3—C2—H2119.8C18—C17—H17120.0
C4—C3—C2120.3 (3)C17—C18—C13120.3 (3)
C4—C3—H3119.9C17—C18—H18119.8
C2—C3—H3119.9C13—C18—H18119.8
C3—C4—C5120.4 (3)O20—C19—S1119.69 (17)
C3—C4—H4119.8O20—C19—S2125.54 (17)
C5—C4—H4119.8S1—C19—S2114.77 (13)
C4—C5—C6119.7 (3)C19—O20—C21118.96 (19)
C4—C5—H5120.2O20—C21—H21A109.5
C6—C5—H5120.2O20—C21—H21B109.5
C1—C6—C5120.6 (2)H21A—C21—H21B109.5
C1—C6—H6119.7O20—C21—H21C109.5
C5—C6—H6119.7H21A—C21—H21C109.5
C8—C7—C12118.7 (2)H21B—C21—H21C109.5
C8—C7—P119.16 (18)O23—C22—S4123.92 (17)
C12—C7—P122.1 (2)O23—C22—S3115.46 (16)
C7—C8—C9120.1 (3)S4—C22—S3120.60 (14)
C7—C8—H8120.0C22—O23—C24119.4 (2)
C9—C8—H8120.0O23—C24—H24A109.5
C10—C9—C8121.1 (3)O23—C24—H24B109.5
C10—C9—H9119.5H24A—C24—H24B109.5
C8—C9—H9119.5O23—C24—H24C109.5
C9—C10—C11119.2 (3)H24A—C24—H24C109.5
C9—C10—H10120.4H24B—C24—H24C109.5
C11—C10—H10120.4
P—Pd—S1—C1926.14 (14)C13—P—C7—C1281.9 (3)
S3—Pd—S1—C19177.19 (8)C1—P—C7—C12−28.2 (3)
S2—Pd—S1—C19−0.47 (8)Pd—P—C7—C12−153.6 (2)
P—Pd—S2—C19−174.52 (8)C12—C7—C8—C9−0.8 (4)
S3—Pd—S2—C19−32.0 (3)P—C7—C8—C9176.9 (2)
S1—Pd—S2—C190.46 (8)C7—C8—C9—C101.2 (4)
P—Pd—S3—C22174.99 (9)C8—C9—C10—C11−0.1 (5)
S2—Pd—S3—C2232.3 (3)C9—C10—C11—C12−1.4 (5)
S1—Pd—S3—C220.40 (9)C10—C11—C12—C71.8 (6)
S3—Pd—P—C7−85.16 (8)C8—C7—C12—C11−0.7 (5)
S2—Pd—P—C792.24 (8)P—C7—C12—C11−178.3 (3)
S1—Pd—P—C766.54 (14)C7—P—C13—C14−7.9 (2)
S3—Pd—P—C1334.40 (8)C1—P—C13—C14102.3 (2)
S2—Pd—P—C13−148.20 (8)Pd—P—C13—C14−130.10 (18)
S1—Pd—P—C13−173.90 (12)C7—P—C13—C18171.35 (18)
S3—Pd—P—C1156.01 (8)C1—P—C13—C18−78.4 (2)
S2—Pd—P—C1−26.60 (8)Pd—P—C13—C1849.2 (2)
S1—Pd—P—C1−52.30 (14)C18—C13—C14—C150.1 (4)
C7—P—C1—C2127.6 (2)P—C13—C14—C15179.3 (2)
C13—P—C1—C216.5 (2)C13—C14—C15—C160.8 (4)
Pd—P—C1—C2−110.26 (19)C14—C15—C16—C17−0.2 (5)
C7—P—C1—C6−53.8 (2)C15—C16—C17—C18−1.3 (5)
C13—P—C1—C6−164.93 (19)C16—C17—C18—C132.2 (4)
Pd—P—C1—C668.3 (2)C14—C13—C18—C17−1.5 (4)
C6—C1—C2—C3−0.4 (4)P—C13—C18—C17179.2 (2)
P—C1—C2—C3178.2 (2)Pd—S1—C19—O20−179.27 (18)
C1—C2—C3—C40.3 (5)Pd—S1—C19—S20.68 (11)
C2—C3—C4—C50.1 (5)Pd—S2—C19—O20179.3 (2)
C3—C4—C5—C6−0.4 (5)Pd—S2—C19—S1−0.69 (11)
C2—C1—C6—C50.0 (4)S1—C19—O20—C21−175.44 (16)
P—C1—C6—C5−178.6 (2)S2—C19—O20—C214.6 (3)
C4—C5—C6—C10.4 (4)Pd—S3—C22—O239.4 (2)
C13—P—C7—C8−95.7 (2)Pd—S3—C22—S4−172.25 (10)
C1—P—C7—C8154.22 (19)S4—C22—O23—C24−6.8 (4)
Pd—P—C7—C828.8 (2)S3—C22—O23—C24171.4 (2)
D—H···AD—HH···AD···AD—H···A
C18—H18···O20i0.932.643.211120.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C18—H18⋯O20i0.932.643.211120

Symmetry code: (i) .

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1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

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