Literature DB >> 22219392

Identification of two voltage-dependent anion channel-like protein sequences conserved in Kinetoplastida.

Nadine Flinner1, Enrico Schleiff, Oliver Mirus.   

Abstract

The eukaryotic porin superfamily consists of two families, voltage-dependent anion channel (VDAC) and Tom40, which are both located in the mitochondrial outer membrane. In Trypanosoma brucei, only a single member of the VDAC family has been described. We report the detection of two additional eukaryotic porin-like sequences in T. brucei. By bioinformatic means, we classify both as putative VDAC isoforms.

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Year:  2012        PMID： 22219392      PMCID： PMC3367756          DOI： 10.1098/rsbl.2011.1121

Source DB:  PubMed          Journal:  Biol Lett        ISSN： 1744-9561            Impact factor:   3.703


  26 in total

1.  Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.

Authors:  Weizhong Li; Adam Godzik
Journal:  Bioinformatics       Date:  2006-05-26       Impact factor: 6.937

2.  Microsporidian mitosomes retain elements of the general mitochondrial targeting system.

Authors:  Lena Burri; Bryony A P Williams; Dejan Bursac; Trevor Lithgow; Patrick J Keeling
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-16       Impact factor: 11.205

3.  Dissecting membrane insertion of mitochondrial beta-barrel proteins.

Authors:  Stephan Kutik; Diana Stojanovski; Lars Becker; Thomas Becker; Michael Meinecke; Vivien Krüger; Claudia Prinz; Chris Meisinger; Bernard Guiard; Richard Wagner; Nikolaus Pfanner; Nils Wiedemann
Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

4.  Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins.

Authors:  Hammad Naveed; Ronald Jackups; Jie Liang
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

Review 5.  Recent advances in tRNA mitochondrial import.

Authors:  Thalia Salinas; Anne-Marie Duchêne; Laurence Maréchal-Drouard
Journal:  Trends Biochem Sci       Date:  2008-05-29       Impact factor: 13.807

6.  The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating.

Authors:  Rachna Ujwal; Duilio Cascio; Jacques-Philippe Colletier; Salem Faham; Jun Zhang; Ligia Toro; Peipei Ping; Jeff Abramson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-06       Impact factor: 11.205

7.  The single mitochondrial porin of Trypanosoma brucei is the main metabolite transporter in the outer mitochondrial membrane.

Authors:  Mascha Pusnik; Fabien Charrière; Pascal Mäser; Ross F Waller; Michael J Dagley; Trevor Lithgow; André Schneider
Journal:  Mol Biol Evol       Date:  2008-12-17       Impact factor: 16.240

8.  A comprehensive analysis of Trypanosoma brucei mitochondrial proteome.

Authors:  Aswini K Panigrahi; Yuko Ogata; Alena Zíková; Atashi Anupama; Rachel A Dalley; Nathalie Acestor; Peter J Myler; Kenneth D Stuart
Journal:  Proteomics       Date:  2009-01       Impact factor: 3.984

9.  The evolutionary history of mitochondrial porins.

Authors:  Matthew J Young; Denice C Bay; Georg Hausner; Deborah A Court
Journal:  BMC Evol Biol       Date:  2007-02-28       Impact factor: 3.260

10.  Insights into the genome sequence of a free-living Kinetoplastid: Bodo saltans (Kinetoplastida: Euglenozoa).

Authors:  Andrew P Jackson; Michael A Quail; Matthew Berriman
Journal:  BMC Genomics       Date:  2008-12-09       Impact factor: 3.969
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  10 in total

1.  Bacterial origin of a mitochondrial outer membrane protein translocase: new perspectives from comparative single channel electrophysiology.

Authors:  Anke Harsman; Moritz Niemann; Mascha Pusnik; Oliver Schmidt; Björn M Burmann; Sebastian Hiller; Chris Meisinger; André Schneider; Richard Wagner
Journal:  J Biol Chem       Date:  2012-07-09       Impact factor: 5.157

2.  The Two TpsB-Like Proteins in Anabaena sp. Strain PCC 7120 Are Involved in Secretion of Selected Substrates.

Authors:  Giang Ngo; Melis Girbas; Hannah Schätzle; Andreas Hammer; Schara Safarian; Maximilian Hübinger; Enrico Schleiff
Journal:  J Bacteriol       Date:  2021-01-25       Impact factor: 3.490

Review 3.  Protein targeting and transport as a necessary consequence of increased cellular complexity.

Authors:  Maik S Sommer; Enrico Schleiff
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-08-01       Impact factor: 10.005

4.  Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis.

Authors:  Andonis Karachitos; Wojciech Grabiński; Martyna Baranek; Hanna Kmita
Journal:  Front Physiol       Date:  2021-12-13       Impact factor: 4.566

5.  Mitochondrial outer membrane proteome of Trypanosoma brucei reveals novel factors required to maintain mitochondrial morphology.

Authors:  Moritz Niemann; Sebastian Wiese; Jan Mani; Astrid Chanfon; Christopher Jackson; Chris Meisinger; Bettina Warscheid; André Schneider
Journal:  Mol Cell Proteomics       Date:  2012-12-06       Impact factor: 5.911

6.  Trypanosomal TAC40 constitutes a novel subclass of mitochondrial β-barrel proteins specialized in mitochondrial genome inheritance.

Authors:  Felix Schnarwiler; Moritz Niemann; Nicholas Doiron; Anke Harsman; Sandro Käser; Jan Mani; Astrid Chanfon; Caroline E Dewar; Silke Oeljeklaus; Christopher B Jackson; Mascha Pusnik; Oliver Schmidt; Chris Meisinger; Sebastian Hiller; Bettina Warscheid; Achim C Schnaufer; Torsten Ochsenreiter; André Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-12       Impact factor: 11.205

7.  Biogenesis of the mitochondrial DNA inheritance machinery in the mitochondrial outer membrane of Trypanosoma brucei.

Authors:  Sandro Käser; Mathilde Willemin; Felix Schnarwiler; Bernd Schimanski; Daniel Poveda-Huertes; Silke Oeljeklaus; Beat Haenni; Benoît Zuber; Bettina Warscheid; Chris Meisinger; André Schneider
Journal:  PLoS Pathog       Date:  2017-12-29       Impact factor: 6.823

Review 8.  Membrane Proteins in Trypanosomatids Involved in Ca2+ Homeostasis and Signaling.

Authors:  Srinivasan Ramakrishnan; Roberto Docampo
Journal:  Genes (Basel)       Date:  2018-06-19       Impact factor: 4.096

9.  Characterization of the targeting signal in mitochondrial β-barrel proteins.

Authors:  Tobias Jores; Anna Klinger; Lucia E Groß; Shin Kawano; Nadine Flinner; Elke Duchardt-Ferner; Jens Wöhnert; Hubert Kalbacher; Toshiya Endo; Enrico Schleiff; Doron Rapaport
Journal:  Nat Commun       Date:  2016-06-27       Impact factor: 14.919

10.  Toc75-V/OEP80 is processed during translocation into chloroplasts, and the membrane-embedded form exposes its POTRA domain to the intermembrane space.

Authors:  Lucia E Gross; Nicole Spies; Stefan Simm; Enrico Schleiff
Journal:  FEBS Open Bio       Date:  2020-02-17       Impact factor: 2.693
  10 in total

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