Literature DB >> 2221376

Parameterization of contribution of sugar units to elution volumes in reverse-phase HPLC of 2-pyridylaminated oligosaccharides.

Y C Lee1, B I Lee, N Tomiya, N Takahashi.   

Abstract

The reverse-phase high-performance liquid chromatography elution data, expressed in glucose units, of 2-pyridylaminated oligosaccharides (PA-oligosaccharides) originated from N-glycosides of glycoproteins have been analyzed with multiple regression to obtain parameters of contribution ascribable to each monosaccharide unit. For the best results, the known PA-oligosaccharides were classified into M-series (the "high mannose" type), X-series (those containing xylose), F-series (those containing L-Fuc alpha (1,6)GlcNAc-PA), and Z-series (all others). Within each series, a variable ("unit contribution") is assigned to every sugar component in the oligosaccharide, and the elution value of a given oligosaccharide was assumed to be the sum total of the unit contributions. The unit contribution obtained from such multiple regression calculations led to a set of elution values for oligosaccharides in each series, which showed very good agreement with the observed elution values. These unit contribution values are useful in predicting the elution value when the exact structure is known, and they also aid in predicting the structure from the known elution value.

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Year:  1990        PMID: 2221376     DOI: 10.1016/0003-2697(90)90603-7

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  7 in total

1.  Structures and contribution to the antigenicity of oligosaccharides of Japanese cedar (Cryptomeria japonica) pollen allergen Cry j I: relationship between the structures and antigenic epitopes of plant N-linked complex-type glycans.

Authors:  H Ogawa; A Hijikata; M Amano; K Kojima; H Fukushima; I Ishizuka; Y Kurihara; I Matsumoto
Journal:  Glycoconj J       Date:  1996-08       Impact factor: 2.916

2.  Structural analysis of N-glycans from allergenic grass, ragweed and tree pollens: core alpha1,3-linked fucose and xylose present in all pollens examined.

Authors:  I B Wilson; F Altmann
Journal:  Glycoconj J       Date:  1998-11       Impact factor: 2.916

3.  HPLC method for the determination of Fuc to Asn-linked GlcNAc fucosyltransferases.

Authors:  A Roitinger; H Leiter; E Staudacher; F Altmann
Journal:  Glycoconj J       Date:  1998-01       Impact factor: 2.916

4.  Dysregulation of TGF-beta1 receptor activation leads to abnormal lung development and emphysema-like phenotype in core fucose-deficient mice.

Authors:  Xiangchun Wang; Shinya Inoue; Jianguo Gu; Eiji Miyoshi; Katsuhisa Noda; Wenzhe Li; Yoko Mizuno-Horikawa; Miyako Nakano; Michio Asahi; Motoko Takahashi; Naofumi Uozumi; Shinji Ihara; Seung Ho Lee; Yoshitaka Ikeda; Yukihiro Yamaguchi; Yoshiya Aze; Yoshiaki Tomiyama; Junichi Fujii; Keiichiro Suzuki; Akihiro Kondo; Steven D Shapiro; Carlos Lopez-Otin; Tomoyuki Kuwaki; Masaru Okabe; Koichi Honke; Naoyuki Taniguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-18       Impact factor: 11.205

5.  An HPLC-MALDI MS method for N-glycan analyses using smaller size samples: application to monitor glycan modulation by medium conditions.

Authors:  Michael P Gillmeister; Noboru Tomiya; Scott J Jacobia; Yuan C Lee; Stephen F Gorfien; Michael J Betenbaugh
Journal:  Glycoconj J       Date:  2009-12       Impact factor: 2.916

6.  Improved method for drawing of a glycan map, and the first page of glycan atlas, which is a compilation of glycan maps for a whole organism.

Authors:  Shunji Natsuka; Mayumi Masuda; Wataru Sumiyoshi; Shin-ichi Nakakita
Journal:  PLoS One       Date:  2014-07-09       Impact factor: 3.240

7.  Separation and Identification of Permethylated Glycan Isomers by Reversed Phase NanoLC-NSI-MSn.

Authors:  Simone Kurz; M Osman Sheikh; Shan Lu; Lance Wells; Michael Tiemeyer
Journal:  Mol Cell Proteomics       Date:  2021-01-26       Impact factor: 5.911

  7 in total

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