Literature DB >> 22209094

Space, time, form: viewing the Tree of Life.

Roderic D M Page1.   

Abstract

There are numerous ways to display a phylogenetic tree, which is reflected in the diversity of software tools available to phylogenetists. Displaying very large trees continues to be a challenge, made ever harder as increasing computing power enables researchers to construct ever-larger trees. At the same time, computing technology is enabling novel visualisations, ranging from geophylogenies embedded on digital globes to touch-screen interfaces that enable greater interaction with evolutionary trees. In this review, I survey recent developments in phylogenetic visualisation, highlighting successful (and less successful) approaches and sketching some future directions.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2011        PMID: 22209094     DOI: 10.1016/j.tree.2011.12.002

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  7 in total

1.  Building megaphylogenies for macroecology: taking up the challenge.

Authors:  Cristina Roquet; Wilfried Thuiller; Sébastien Lavergne
Journal:  Ecography       Date:  2013-01-01       Impact factor: 5.992

Review 2.  BIR Pipeline for Preparation of Phylogenomic Data.

Authors:  Surendra Kumar; Anders K Krabberød; Ralf S Neumann; Katerina Michalickova; Sen Zhao; Xiaoli Zhang; Kamran Shalchian-Tabrizi
Journal:  Evol Bioinform Online       Date:  2015-04-27       Impact factor: 1.625

3.  Lifemap: Exploring the Entire Tree of Life.

Authors:  Damien M de Vienne
Journal:  PLoS Biol       Date:  2016-12-22       Impact factor: 8.029

4.  Animating and exploring phylogenies with fibre plots.

Authors:  William D Pearse
Journal:  F1000Res       Date:  2016-11-29

5.  Multi-criteria protein structure comparison and structural similarities analysis using pyMCPSC.

Authors:  Anuj Sharma; Elias S Manolakos
Journal:  PLoS One       Date:  2018-10-17       Impact factor: 3.240

Review 6.  Advances in Visualization Tools for Phylogenomic and Phylodynamic Studies of Viral Diseases.

Authors:  Kristof Theys; Philippe Lemey; Anne-Mieke Vandamme; Guy Baele
Journal:  Front Public Health       Date:  2019-08-02

7.  OneZoom: a fractal explorer for the tree of life.

Authors:  J Rosindell; L J Harmon
Journal:  PLoS Biol       Date:  2012-10-16       Impact factor: 8.029

  7 in total

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