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Literature DB >> 22207748

Complete genome sequence of the BTEX-degrading bacterium Pseudoxanthomonas spadix BD-a59.

Seung Hyeon Lee¹, Hyun Mi Jin, Hyo Jung Lee, Jeong Myeong Kim, Che Ok Jeon.

Abstract

Pseudoxanthomonas spadix BD-a59, able to metabolize all six BTEX (benzene, toluene, ethylbenzene, and o-, m-, and p-xylene) compounds, was isolated from gasoline-contaminated sediment. Here, we report the complete 3.45-Mb genome sequence and annotation of strain BD-a59. These advance the understanding of strain BD-a59's genomic properties and pollutant metabolic versatility.

Entities: Chemical Species

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Year: 2012 PMID： 22207748 PMCID： PMC3256636 DOI： 10.1128/JB.06436-11

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

11 in total

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Journal: Curr Opin Biotechnol Date: 2000-06 Impact factor: 9.740

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Journal: Genome Res Date: 1998-03 Impact factor: 9.043

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Journal: Nucleic Acids Res Date: 1997-03-01 Impact factor: 16.971

5. Anaerobic degradation of benzene, toluene, ethylbenzene, and xylene compounds by Dechloromonas strain RCB.

Authors: Romy Chakraborty; Susan M O'Connor; Emily Chan; John D Coates
Journal: Appl Environ Microbiol Date: 2005-12 Impact factor: 4.792

6. Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris.

Authors: Wei Qian; Yantao Jia; Shuang-Xi Ren; Yong-Qiang He; Jia-Xun Feng; Ling-Feng Lu; Qihong Sun; Ge Ying; Dong-Jie Tang; Hua Tang; Wei Wu; Pei Hao; Lifeng Wang; Bo-Le Jiang; Shenyan Zeng; Wen-Yi Gu; Gang Lu; Li Rong; Yingchuan Tian; Zhijian Yao; Gang Fu; Baoshan Chen; Rongxiang Fang; Boqin Qiang; Zhu Chen; Guo-Ping Zhao; Ji-Liang Tang; Chaozu He
Journal: Genome Res Date: 2005-05-17 Impact factor: 9.043

7. A novel toluene-3-monooxygenase pathway cloned from Pseudomonas pickettii PKO1.

Authors: R H Olsen; J J Kukor; B Kaphammer
Journal: J Bacteriol Date: 1994-06 Impact factor: 3.490

8. Pseudoxanthomonas suwonensis sp. nov., isolated from cotton waste composts.

Authors: Hang-Yeon Weon; Byung-Yong Kim; Jong-Shik Kim; Seon-Young Lee; Yang-Hee Cho; Seung-Joo Go; Seung-Beom Hong; Wan-Taek Im; Soon-Wo Kwon
Journal: Int J Syst Evol Microbiol Date: 2006-03 Impact factor: 2.747

9. Influence of soil components on the biodegradation of benzene, toluene, ethylbenzene, and o-, m-, and p-xylenes by the newly isolated bacterium Pseudoxanthomonas spadix BD-a59.

Authors: Jeong Myeong Kim; Ngoc Thuan Le; Bok Sil Chung; Jin Ho Park; Jin-Woo Bae; Eugene L Madsen; Che Ok Jeon
Journal: Appl Environ Microbiol Date: 2008-10-03 Impact factor: 4.792

10. RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors: Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal: Nucleic Acids Res Date: 2007-04-22 Impact factor: 16.971

11 in total

1. Comparative genomic analysis and benzene, toluene, ethylbenzene, and o-, m-, and p-xylene (BTEX) degradation pathways of Pseudoxanthomonas spadix BD-a59.

Authors: Eun Jin Choi; Hyun Mi Jin; Seung Hyeon Lee; Renukaradhya K Math; Eugene L Madsen; Che Ok Jeon
Journal: Appl Environ Microbiol Date: 2012-11-16 Impact factor: 4.792

2. Characterization of novel polycyclic aromatic hydrocarbon dioxygenases from the bacterial metagenomic DNA of a contaminated soil.

Authors: Angelina Chemerys; Eric Pelletier; Corinne Cruaud; Florence Martin; Fabien Violet; Yves Jouanneau
Journal: Appl Environ Microbiol Date: 2014-08-15 Impact factor: 4.792

3. Microbial diversity, community composition and metabolic potential in hydrocarbon contaminated oily sludge: prospects for in situ bioremediation.

Authors: Ranjit Das; Sufia K Kazy
Journal: Environ Sci Pollut Res Int Date: 2014-03-01 Impact factor: 4.223

4. Characterizing the Microbial Consortium L1 Capable of Efficiently Degrading Chlorimuron-Ethyl via Metagenome Combining 16S rDNA Sequencing.

Authors: Xiang Li; Changming Lu; Yumeng Dai; Zhixiong Yu; Wu Gu; Tingting Li; Xinyu Li; Xu Li; Xiujuan Wang; Zhencheng Su; Mingkai Xu; Huiwen Zhang
Journal: Front Microbiol Date: 2022-06-23 Impact factor: 6.064

5. Biodegradation of binary mixtures of octane with benzene, toluene, ethylbenzene or xylene (BTEX): insights on the potential of Burkholderia, Pseudomonas and Cupriavidus isolates.

Authors: Hernando P Bacosa; Jhonamie A Mabuhay-Omar; Rodulf Anthony T Balisco; Dawin M Omar; Chihiro Inoue
Journal: World J Microbiol Biotechnol Date: 2021-06-21 Impact factor: 3.312

10. Stable isotope probing of hypoxic toluene degradation at the Siklós aquifer reveals prominent role of Rhodocyclaceae.

Authors: András Táncsics; Anna Róza Szalay; Milan Farkas; Tibor Benedek; Sándor Szoboszlay; István Szabó; Tillmann Lueders
Journal: FEMS Microbiol Ecol Date: 2018-06-01 Impact factor: 4.194