Literature DB >> 22205530

Use of UTF1 genetic control elements as iPSC reporter.

Amir Morshedi1, Monireh Soroush Noghabi, Peter Dröge.   

Abstract

The reprogramming of adult somatic cells into an embryonic stem cell (ESC) state by various means has opened a new chapter in basic and applied life science. While this technology will create great opportunities for regenerative medicine, the more immediate impact is likely to be found in human disease modeling and drug testing/development. An important aspect in the latter contexts is the ability to reliably monitor the pluripotent stem cell state, in particular with respect to human cell reprogramming using patient-specific somatic cells and high-throughput screens. Undifferentiated transcription factor 1 (UTF1) belongs to the core transcriptional network characterizing pluripotency. UTF1 is involved in ESC-specific chromatin organization, and its expression pattern during cell reprogramming and subsequent differentiation appears to be tightly connected with the pluripotent stem cell state. Here, we capitalized on these features and generated a reliable reporter system that was used to monitor induced pluripotent stem cell (iPSC) formation and subsequent differentiation. Our reporter cassette comprises less than 2.3 kb and remains functional during many cell passages after genomic integration. The fact that the human UTF1 genetic control elements work in a mouse background and the demonstrated functionality of the reporter in an epigenetic state further qualifies this system as a versatile new tool for iPSC research.

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Year:  2013        PMID: 22205530     DOI: 10.1007/s12015-011-9342-7

Source DB:  PubMed          Journal:  Stem Cell Rev Rep        ISSN: 2629-3277            Impact factor:   5.739


  21 in total

1.  Plat-E: an efficient and stable system for transient packaging of retroviruses.

Authors:  S Morita; T Kojima; T Kitamura
Journal:  Gene Ther       Date:  2000-06       Impact factor: 5.250

2.  Carboxy-terminally truncated form of a coactivator UTF1 stimulates transcription from a variety of gene promoters through the TATA Box.

Authors:  A Fukushima; M Nishimoto; A Okuda; M Muramatsu
Journal:  Biochem Biophys Res Commun       Date:  1999-05-19       Impact factor: 3.575

3.  A real-time pluripotency reporter for human stem cells.

Authors:  Jiang F Zhong; Leslie Weiner; Yangsun Jin; Wange Lu; Clive R Taylor
Journal:  Stem Cells Dev       Date:  2010-01       Impact factor: 3.272

4.  Dissecting direct reprogramming through integrative genomic analysis.

Authors:  Tarjei S Mikkelsen; Jacob Hanna; Xiaolan Zhang; Manching Ku; Marius Wernig; Patrick Schorderet; Bradley E Bernstein; Rudolf Jaenisch; Eric S Lander; Alexander Meissner
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

5.  Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution.

Authors:  Nimet Maherali; Rupa Sridharan; Wei Xie; Jochen Utikal; Sarah Eminli; Katrin Arnold; Matthias Stadtfeld; Robin Yachechko; Jason Tchieu; Rudolf Jaenisch; Kathrin Plath; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2007-06-07       Impact factor: 24.633

6.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

7.  Undifferentiated embryonic cell transcription factor 1 regulates ESC chromatin organization and gene expression.

Authors:  Susanne M Kooistra; Vincent van den Boom; Rajkumar P Thummer; Frank Johannes; René Wardenaar; Bruno M Tesson; Liesbeth M Veenhoff; Fabrizia Fusetti; Laura P O'Neill; Bryan M Turner; Gerald de Haan; Bart J L Eggen
Journal:  Stem Cells       Date:  2010-10       Impact factor: 6.277

8.  Initial colony morphology-based selection for iPS cells derived from adult fibroblasts is substantially improved by temporary UTF1-based selection.

Authors:  Kurt Pfannkuche; Azra Fatima; Manoj K Gupta; Rebecca Dieterich; Jürgen Hescheler
Journal:  PLoS One       Date:  2010-03-08       Impact factor: 3.240

9.  Generation of germline-competent induced pluripotent stem cells.

Authors:  Keisuke Okita; Tomoko Ichisaka; Shinya Yamanaka
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

10.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

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  4 in total

1.  Probing into the biological processes influenced by ESC factor and oncoprotein HMGA2 using iPSCs.

Authors:  Amir Morshedi; Zhonglu Ren; Jinming Li; Peter Dröge
Journal:  Stem Cell Rev Rep       Date:  2013-08       Impact factor: 5.739

Review 2.  An Insight into the Role of UTF1 in Development, Stem Cells, and Cancer.

Authors:  Khyati Raina; Chandrima Dey; Madhuri Thool; S Sudhagar; Rajkumar P Thummer
Journal:  Stem Cell Rev Rep       Date:  2021-01-30       Impact factor: 6.692

3.  Utf1 contributes to intergenerational epigenetic inheritance of pluripotency.

Authors:  Qiuye Bao; Amir Morshedi; Fulu Wang; Sharma Bhargy; Konstantin Pervushin; Wei-Ping Yu; Peter Dröge
Journal:  Sci Rep       Date:  2017-11-06       Impact factor: 4.379

4.  Conservative site-specific and single-copy transgenesis in human LINE-1 elements.

Authors:  Shree Harsha Vijaya Chandra; Harshyaa Makhija; Sabrina Peter; Cho Mar Myint Wai; Jinming Li; Jindong Zhu; Zhonglu Ren; Martina Stagno D'Alcontres; Jia Wei Siau; Sharon Chee; Farid John Ghadessy; Peter Dröge
Journal:  Nucleic Acids Res       Date:  2015-12-15       Impact factor: 16.971

  4 in total

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