Literature DB >> 22205518

Power tools for gene expression and clonal analysis in Drosophila.

Alberto del Valle Rodríguez1, Dominic Didiano, Claude Desplan.   

Abstract

The development of two-component expression systems in Drosophila melanogaster, one of the most powerful genetic models, has allowed the precise manipulation of gene function in specific cell populations. These expression systems, in combination with site-specific recombination approaches, have also led to the development of new methods for clonal lineage analysis. We present a hands-on user guide to the techniques and approaches that have greatly increased resolution of genetic analysis in the fly, with a special focus on their application for lineage analysis. Our intention is to provide guidance and suggestions regarding which genetic tools are most suitable for addressing different developmental questions.

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Year:  2011        PMID: 22205518      PMCID: PMC3574576          DOI: 10.1038/nmeth.1800

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  61 in total

1.  Essential roles of Drosophila RhoA in the regulation of neuroblast proliferation and dendritic but not axonal morphogenesis.

Authors:  T Lee; C Winter; S S Marticke; A Lee; L Luo
Journal:  Neuron       Date:  2000-02       Impact factor: 17.173

2.  A conditional tissue-specific transgene expression system using inducible GAL4.

Authors:  T Osterwalder; K S Yoon; B H White; H Keshishian
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-23       Impact factor: 11.205

Review 3.  GAL4 system in Drosophila: a fly geneticist's Swiss army knife.

Authors:  Joseph B Duffy
Journal:  Genesis       Date:  2002 Sep-Oct       Impact factor: 2.487

Review 4.  Recombinases and their use in gene activation, gene inactivation, and transgenesis.

Authors:  Johannes Bischof; Konrad Basler
Journal:  Methods Mol Biol       Date:  2008

5.  The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome.

Authors:  K G Golic; S Lindquist
Journal:  Cell       Date:  1989-11-03       Impact factor: 41.582

6.  A new class of yeast transcriptional activators.

Authors:  J Ma; M Ptashne
Journal:  Cell       Date:  1987-10-09       Impact factor: 41.582

7.  Transgene Coplacement and high efficiency site-specific recombination with the Cre/loxP system in Drosophila.

Authors:  M L Siegal; D L Hartl
Journal:  Genetics       Date:  1996-10       Impact factor: 4.562

8.  Cell lineage-specific expression and function of the empty spiracles gene in adult brain development of Drosophila melanogaster.

Authors:  Robert Lichtneckert; Bruno Bello; Heinrich Reichert
Journal:  Development       Date:  2007-02-21       Impact factor: 6.868

9.  The transcription factor Zfh1 is involved in the regulation of neuropeptide expression and growth of larval neuromuscular junctions in Drosophila melanogaster.

Authors:  Georg Vogler; Joachim Urban
Journal:  Dev Biol       Date:  2008-05-21       Impact factor: 3.582

10.  Targeted gene expression as a means of altering cell fates and generating dominant phenotypes.

Authors:  A H Brand; N Perrimon
Journal:  Development       Date:  1993-06       Impact factor: 6.868

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  102 in total

Review 1.  Methods for studying planar cell polarity.

Authors:  Jessica Olofsson; Jeffrey D Axelrod
Journal:  Methods       Date:  2014-03-27       Impact factor: 3.608

2.  TIE-DYE: a combinatorial marking system to visualize and genetically manipulate clones during development in Drosophila melanogaster.

Authors:  Melanie I Worley; Linda Setiawan; Iswar K Hariharan
Journal:  Development       Date:  2013-06-19       Impact factor: 6.868

3.  Inducible protein traps with dominant phenotypes for functional analysis of the Drosophila genome.

Authors:  Swetha Singari; Naureen Javeed; Nicholas J Tardi; Suresh Marada; Jeff C Carlson; Steven Kirk; Judith M Thorn; Kevin A Edwards
Journal:  Genetics       Date:  2013-10-30       Impact factor: 4.562

4.  Detection of Cell Death in Drosophila Tissues.

Authors:  Deepika Vasudevan; Hyung Don Ryoo
Journal:  Methods Mol Biol       Date:  2016

Review 5.  Model Organisms in G Protein-Coupled Receptor Research.

Authors:  Tobias Langenhan; Maureen M Barr; Michael R Bruchas; John Ewer; Leslie C Griffith; Isabella Maiellaro; Paul H Taghert; Benjamin H White; Kelly R Monk
Journal:  Mol Pharmacol       Date:  2015-05-15       Impact factor: 4.436

6.  Repurposing an endogenous degradation system for rapid and targeted depletion of C. elegans proteins.

Authors:  Stephen T Armenti; Lauren L Lohmer; David R Sherwood; Jeremy Nance
Journal:  Development       Date:  2014-11-05       Impact factor: 6.868

7.  Adipocyte amino acid sensing controls adult germline stem cell number via the amino acid response pathway and independently of Target of Rapamycin signaling in Drosophila.

Authors:  Alissa R Armstrong; Kaitlin M Laws; Daniela Drummond-Barbosa
Journal:  Development       Date:  2014-10-30       Impact factor: 6.868

8.  A resource for manipulating gene expression and analyzing cis-regulatory modules in the Drosophila CNS.

Authors:  Laurina Manning; Ellie S Heckscher; Maria D Purice; Jourdain Roberts; Alysha L Bennett; Jason R Kroll; Jill L Pollard; Marie E Strader; Josh R Lupton; Anna V Dyukareva; Phuong Nam Doan; David M Bauer; Allison N Wilbur; Stephanie Tanner; Jimmy J Kelly; Sen-Lin Lai; Khoa D Tran; Minoree Kohwi; Todd R Laverty; Joseph C Pearson; Stephen T Crews; Gerald M Rubin; Chris Q Doe
Journal:  Cell Rep       Date:  2012-10-11       Impact factor: 9.423

9.  A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster.

Authors:  Aurélie Jory; Carlos Estella; Matt W Giorgianni; Matthew Slattery; Todd R Laverty; Gerald M Rubin; Richard S Mann
Journal:  Cell Rep       Date:  2012-10-12       Impact factor: 9.423

10.  Live cell cycle analysis of Drosophila tissues using the Attune Acoustic Focusing Cytometer and Vybrant DyeCycle violet DNA stain.

Authors:  Kerry Flegel; Dan Sun; Olga Grushko; Yiqin Ma; Laura Buttitta
Journal:  J Vis Exp       Date:  2013-05-19       Impact factor: 1.355

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