Literature DB >> 22205512

Optimal enzymes for amplifying sequencing libraries.

Michael A Quail, Thomas D Otto, Yong Gu, Simon R Harris, Thomas F Skelly, Jacqueline A McQuillan, Harold P Swerdlow, Samuel O Oyola.   

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Year:  2011        PMID： 22205512     DOI： 10.1038/nmeth.1814

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  4 in total

1.  A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries.

Authors:  Sheila Fisher; Andrew Barry; Justin Abreu; Brian Minie; Jillian Nolan; Toni M Delorey; Geneva Young; Timothy J Fennell; Alexander Allen; Lauren Ambrogio; Aaron M Berlin; Brendan Blumenstiel; Kristian Cibulskis; Dennis Friedrich; Ryan Johnson; Frank Juhn; Brian Reilly; Ramy Shammas; John Stalker; Sean M Sykes; Jon Thompson; John Walsh; Andrew Zimmer; Zac Zwirko; Stacey Gabriel; Robert Nicol; Chad Nusbaum
Journal:  Genome Biol       Date:  2011-01-04       Impact factor: 13.583

2.  Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.

Authors:  Daniel Aird; Michael G Ross; Wei-Sheng Chen; Maxwell Danielsson; Timothy Fennell; Carsten Russ; David B Jaffe; Chad Nusbaum; Andreas Gnirke
Journal:  Genome Biol       Date:  2011-02-21       Impact factor: 13.583

3.  A large genome center's improvements to the Illumina sequencing system.

Authors:  Michael A Quail; Iwanka Kozarewa; Frances Smith; Aylwyn Scally; Philip J Stephens; Richard Durbin; Harold Swerdlow; Daniel J Turner
Journal:  Nat Methods       Date:  2008-12       Impact factor: 28.547

4.  Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes.

Authors:  Iwanka Kozarewa; Zemin Ning; Michael A Quail; Mandy J Sanders; Matthew Berriman; Daniel J Turner
Journal:  Nat Methods       Date:  2009-03-15       Impact factor: 28.547
  4 in total
  102 in total

1.  Full-length RNA-seq from single cells using Smart-seq2.

Authors:  Simone Picelli; Omid R Faridani; Asa K Björklund; Gösta Winberg; Sven Sagasser; Rickard Sandberg
Journal:  Nat Protoc       Date:  2014-01-02       Impact factor: 13.491

2.  Molecular diagnosis of infantile onset inflammatory bowel disease by exome sequencing.

Authors:  Darrell L Dinwiddie; Julia M Bracken; Julie A Bass; Kathy Christenson; Sarah E Soden; Carol J Saunders; Neil A Miller; Vivekanand Singh; David L Zwick; Charles C Roberts; Jignesh Dalal; Stephen F Kingsmore
Journal:  Genomics       Date:  2013-08-31       Impact factor: 5.736

3.  Smart-seq2 for sensitive full-length transcriptome profiling in single cells.

Authors:  Simone Picelli; Åsa K Björklund; Omid R Faridani; Sven Sagasser; Gösta Winberg; Rickard Sandberg
Journal:  Nat Methods       Date:  2013-09-22       Impact factor: 28.547

Review 4.  Use of the nuclear walk-on methodology to determine sites of RNA polymerase II initiation and pausing and quantify nascent RNAs in cells.

Authors:  Christopher B Ball; Kyle A Nilson; David H Price
Journal:  Methods       Date:  2019-02-08       Impact factor: 3.608

5.  Reduction of Human DNA Contamination in Clinical Cerebrospinal Fluid Specimens Improves the Sensitivity of Metagenomic Next-Generation Sequencing.

Authors:  Xin-Chao Ji; Lin-Fu Zhou; Chao-Yang Li; Ya-Jun Shi; Meng-Li Wu; Yun Zhang; Xiao-Fei Fei; Gang Zhao
Journal:  J Mol Neurosci       Date:  2020-01-31       Impact factor: 3.444

6.  Effects of Environmental and Management-Associated Factors on Prevalence and Diversity of Streptococcus suis in Clinically Healthy Pig Herds in China and the United Kingdom.

Authors:  A W Dan Tucker; Rui Zhou; Geng Zou; Jianwei Zhou; Ran Xiao; Liangsheng Zhang; Yuting Cheng; Hui Jin; Lu Li; Lijun Zhang; Bin Wu; Ping Qian; Shaowen Li; Lixin Ren; Jinhong Wang; Olusegun Oshota; Juan Hernandez-Garcia; Thomas M Wileman; Stephen Bentley; Lucy Weinert; Duncan J Maskell
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

Review 7.  Single-cell RNA-sequencing: The future of genome biology is now.

Authors:  Simone Picelli
Journal:  RNA Biol       Date:  2016-07-21       Impact factor: 4.652

8.  Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies.

Authors:  Daryl M Gohl; Pajau Vangay; John Garbe; Allison MacLean; Adam Hauge; Aaron Becker; Trevor J Gould; Jonathan B Clayton; Timothy J Johnson; Ryan Hunter; Dan Knights; Kenneth B Beckman
Journal:  Nat Biotechnol       Date:  2016-07-25       Impact factor: 54.908

9.  High-throughput construction of multiple cas9 gene variants via assembly of high-depth tiled and sequence-verified oligonucleotides.

Authors:  Namjin Cho; Han Na Seo; Taehoon Ryu; Euijin Kwon; Sunghoon Huh; Jinsung Noh; Huiran Yeom; Byungjin Hwang; Heejeong Ha; Ji Hyun Lee; Sunghoon Kwon; Duhee Bang
Journal:  Nucleic Acids Res       Date:  2018-05-18       Impact factor: 16.971

10.  Targeted Exome Sequencing Outcome Variations of Colorectal Tumors within and across Two Sequencing Platforms.

Authors:  Hassan Ashktorab; Hamed Azimi; Michael L Nickerson; Sara Bass; Sudhir Varma; Hassan Brim
Journal:  Next Gener Seq Appl       Date:  2016-03-14
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