Literature DB >> 22205159

Brainpeps: the blood-brain barrier peptide database.

Sylvia Van Dorpe1, Antoon Bronselaer, Joachim Nielandt, Sofie Stalmans, Evelien Wynendaele, Kurt Audenaert, Christophe Van De Wiele, Christian Burvenich, Kathelijne Peremans, Hung Hsuchou, Guy De Tré, Bart De Spiegeleer.   

Abstract

Peptides are able to cross the blood-brain barrier (BBB) through various mechanisms, opening new diagnostic and therapeutic avenues. However, their BBB transport data are scattered in the literature over different disciplines, using different methodologies reporting different influx or efflux aspects. Therefore, a comprehensive BBB peptide database (Brainpeps) was constructed to collect the BBB data available in the literature. Brainpeps currently contains BBB transport information with positive as well as negative results. The database is a useful tool to prioritize peptide choices for evaluating different BBB responses or studying quantitative structure-property (BBB behaviour) relationships of peptides. Because a multitude of methods have been used to assess the BBB behaviour of compounds, we classified these methods and their responses. Moreover, the relationships between the different BBB transport methods have been clarified and visualized.

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Year:  2011        PMID: 22205159     DOI: 10.1007/s00429-011-0375-0

Source DB:  PubMed          Journal:  Brain Struct Funct        ISSN: 1863-2653            Impact factor:   3.270


  25 in total

Review 1.  Mass Spectrometry Approaches Empowering Neuropeptide Discovery and Therapeutics.

Authors:  Krishna D B Anapindi; Elena V Romanova; James W Checco; Jonathan V Sweedler
Journal:  Pharmacol Rev       Date:  2022-07       Impact factor: 18.923

2.  BBPpredict: A Web Service for Identifying Blood-Brain Barrier Penetrating Peptides.

Authors:  Xue Chen; Qianyue Zhang; Bowen Li; Chunying Lu; Shanshan Yang; Jinjin Long; Bifang He; Heng Chen; Jian Huang
Journal:  Front Genet       Date:  2022-05-17       Impact factor: 4.772

3.  Variation of the net charge, lipophilicity, and side chain flexibility in Dmt(1)-DALDA: Effect on Opioid Activity and Biodistribution.

Authors:  Alexandre Novoa; Sylvia Van Dorpe; Evelien Wynendaele; Mariana Spetea; Nathalie Bracke; Sofie Stalmans; Cecilia Betti; Nga N Chung; Carole Lemieux; Johannes Zuegg; Matthew A Cooper; Dirk Tourwé; Bart De Spiegeleer; Peter W Schiller; Steven Ballet
Journal:  J Med Chem       Date:  2012-11-12       Impact factor: 7.446

4.  Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides.

Authors:  Ankur Gautam; Kumardeep Chaudhary; Sandeep Singh; Anshika Joshi; Priya Anand; Abhishek Tuknait; Deepika Mathur; Grish C Varshney; Gajendra P S Raghava
Journal:  Nucleic Acids Res       Date:  2013-10-29       Impact factor: 16.971

5.  ParaPep: a web resource for experimentally validated antiparasitic peptide sequences and their structures.

Authors:  Divya Mehta; Priya Anand; Vineet Kumar; Anshika Joshi; Deepika Mathur; Sandeep Singh; Abhishek Tuknait; Kumardeep Chaudhary; Shailendra K Gautam; Ankur Gautam; Grish C Varshney; Gajendra P S Raghava
Journal:  Database (Oxford)       Date:  2014-06-12       Impact factor: 3.451

6.  Designing of peptides with desired half-life in intestine-like environment.

Authors:  Arun Sharma; Deepak Singla; Mamoon Rashid; Gajendra Pal Singh Raghava
Journal:  BMC Bioinformatics       Date:  2014-08-20       Impact factor: 3.169

7.  CancerPPD: a database of anticancer peptides and proteins.

Authors:  Atul Tyagi; Abhishek Tuknait; Priya Anand; Sudheer Gupta; Minakshi Sharma; Deepika Mathur; Anshika Joshi; Sandeep Singh; Ankur Gautam; Gajendra P S Raghava
Journal:  Nucleic Acids Res       Date:  2014-09-30       Impact factor: 16.971

8.  PEPstrMOD: structure prediction of peptides containing natural, non-natural and modified residues.

Authors:  Sandeep Singh; Harinder Singh; Abhishek Tuknait; Kumardeep Chaudhary; Balvinder Singh; S Kumaran; Gajendra P S Raghava
Journal:  Biol Direct       Date:  2015-12-21       Impact factor: 4.540

9.  AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides.

Authors:  Azhagiya Singam Ettayapuram Ramaprasad; Sandeep Singh; Raghava Gajendra P S; Subramanian Venkatesan
Journal:  PLoS One       Date:  2015-09-03       Impact factor: 3.240

10.  Topical Delivery of Protein and Peptide Using Novel Cell Penetrating Peptide IMT-P8.

Authors:  Ankur Gautam; Jagpreet Singh Nanda; Jesse S Samuel; Manisha Kumari; Priyanka Priyanka; Gursimran Bedi; Samir K Nath; Garima Mittal; Neeraj Khatri; Gajendra Pal Singh Raghava
Journal:  Sci Rep       Date:  2016-05-18       Impact factor: 4.379

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