Literature DB >> 22201023

Molecular cloning and characterization of OsUPS, a U-box containing E3 ligase gene that respond to phosphate starvation in rice (Oryza sativa).

Yeon-Jae Hur1, Young Byung Yi, Jai Heon Lee, Young Soo Chung, Ho Won Jung, Dae Jin Yun, Kyung-Min Kim, Dong Soo Park, Doh Hoon Kim.   

Abstract

The ubiquitin-26S proteasome system is important in the quality control of intracellular proteins. The ubiquitin-26S proteasome system includes the E1 (ubiquitin activating), E2 (ubiquitin conjugating), and E3 (ubiquitin ligase) enzymes. U-box proteins are a derived version of RING-finger domains, which have E3 enzyme activity. Here, we present the isolation of a novel U-box protein, U-box containing E3 ligase induced by phosphate starvation (OsUPS), from rice (Oryza sativa). The cDNA encoding the O. sativa U-box protein (OsUPS) comprises 1338 bp, with an open reading frame of 445 amino acids. The amino acid sequence of OsUPS cDNA shows 41-79% identity with other plant U-box homologous genes. The open reading frame of the OsUPS protein is comprised of notable domains: a single ~70-amino acid domain and a GKL domain that contains conserved glycine, lysine/arginine residues and leucine-rich feature. We found that full-length expression of OsUPS was up-regulated in both rice plants and cell culture in the absence of inorganic phosphate (P(i)). A self-ubiquitination assay indicated that the bacterially expressed OsUPS protein had E3 ligase activity, and subcellular localization results showed that OsUPS was located in the chloroplast. These results support the notion that OsUPS plays an important role in the P(i) signaling pathway through the ubiquitin-26S proteasome system.

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Year:  2011        PMID: 22201023     DOI: 10.1007/s11033-011-1399-5

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  23 in total

Review 1.  Polypeptide tags, ubiquitous modifiers for plant protein regulation.

Authors:  R D Vierstra; J Callis
Journal:  Plant Mol Biol       Date:  1999-11       Impact factor: 4.076

Review 2.  Ubiquitin-mediated proteolysis: biological regulation via destruction.

Authors:  A Ciechanover; A Orian; A L Schwartz
Journal:  Bioessays       Date:  2000-05       Impact factor: 4.345

3.  A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly.

Authors:  M Koegl; T Hoppe; S Schlenker; H D Ulrich; T U Mayer; S Jentsch
Journal:  Cell       Date:  1999-03-05       Impact factor: 41.582

Review 4.  Phosphate transport and signaling.

Authors:  K G Raghothama
Journal:  Curr Opin Plant Biol       Date:  2000-06       Impact factor: 7.834

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Heterologous expression and molecular and cellular characterization of CaPUB1 encoding a hot pepper U-Box E3 ubiquitin ligase homolog.

Authors:  Seok Keun Cho; Hoo Sun Chung; Moon Young Ryu; Mi Jin Park; Myeong Min Lee; Young-Yil Bahk; Jungmook Kim; Hyun Sook Pai; Woo Taek Kim
Journal:  Plant Physiol       Date:  2006-10-13       Impact factor: 8.340

7.  OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment.

Authors:  Jong-Jin Park; Jakyung Yi; Jinmi Yoon; Lae-Hyeon Cho; Jin Ping; Hee Joong Jeong; Seok Keun Cho; Woo Taek Kim; Gynheung An
Journal:  Plant J       Date:  2010-12-03       Impact factor: 6.417

Review 8.  The ubiquitin 26S proteasome proteolytic pathway.

Authors:  Jan Smalle; Richard D Vierstra
Journal:  Annu Rev Plant Biol       Date:  2004       Impact factor: 26.379

9.  OsPHR2 is involved in phosphate-starvation signaling and excessive phosphate accumulation in shoots of plants.

Authors:  Jie Zhou; FangChang Jiao; Zhongchang Wu; Yiyi Li; Xuming Wang; Xiaowei He; Weiqi Zhong; Ping Wu
Journal:  Plant Physiol       Date:  2008-02-08       Impact factor: 8.340

10.  Involvement of OsSPX1 in phosphate homeostasis in rice.

Authors:  Chuang Wang; Shan Ying; Hongjie Huang; Kuan Li; Ping Wu; Huixia Shou
Journal:  Plant J       Date:  2008-11-04       Impact factor: 6.417

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  12 in total

1.  PROTEIN PHOSPHATASE95 Regulates Phosphate Homeostasis by Affecting Phosphate Transporter Trafficking in Rice.

Authors:  Zhili Yang; Jian Yang; Yan Wang; Fei Wang; Wenxuan Mao; Qiuju He; Jiming Xu; Zhongchang Wu; Chuanzao Mao
Journal:  Plant Cell       Date:  2020-01-09       Impact factor: 11.277

2.  Identification of genes differentially expressed in the roots of rubber tree (Hevea brasiliensis Muell. Arg.) in response to phosphorus deficiency.

Authors:  Peng He; Huaide Qin; Min Wu; Bingsun Wu; Jiashao Wei; Dapeng Wang
Journal:  Mol Biol Rep       Date:  2012-10-19       Impact factor: 2.316

3.  The S-Domain Receptor Kinase Arabidopsis Receptor Kinase2 and the U Box/Armadillo Repeat-Containing E3 Ubiquitin Ligase9 Module Mediates Lateral Root Development under Phosphate Starvation in Arabidopsis.

Authors:  Srijani Deb; Subramanian Sankaranarayanan; Gayathri Wewala; Ellen Widdup; Marcus A Samuel
Journal:  Plant Physiol       Date:  2014-06-25       Impact factor: 8.340

4.  A U-box E3 ubiquitin ligase OsPUB67 is positively involved in drought tolerance in rice.

Authors:  Qiao Qin; Yinxiao Wang; Liyu Huang; Fengping Du; Xiuqin Zhao; Zhikang Li; Wensheng Wang; Binying Fu
Journal:  Plant Mol Biol       Date:  2019-11-25       Impact factor: 4.076

5.  Genome-wide survey and expression analysis of Chlamydomonas reinhardtii U-box E3 ubiquitin ligases (CrPUBs) reveal a functional lipid metabolism module.

Authors:  Qiulan Luo; Yajun Li; Wenquan Wang; Xiaowen Fei; Xiaodong Deng
Journal:  PLoS One       Date:  2015-03-30       Impact factor: 3.240

6.  Comprehensive Expression Profiling of Rice Tetraspanin Genes Reveals Diverse Roles During Development and Abiotic Stress.

Authors:  Balaji Mani; Manu Agarwal; Surekha Katiyar-Agarwal
Journal:  Front Plant Sci       Date:  2015-12-11       Impact factor: 5.753

7.  Homologous U-box E3 Ubiquitin Ligases OsPUB2 and OsPUB3 Are Involved in the Positive Regulation of Low Temperature Stress Response in Rice (Oryza sativa L.).

Authors:  Mi Young Byun; Li Hua Cui; Tae Kyung Oh; Ye-Jin Jung; Andosung Lee; Ki Youl Park; Bin Goo Kang; Woo Taek Kim
Journal:  Front Plant Sci       Date:  2017-01-20       Impact factor: 5.753

8.  The Arabidopsis paralogs, PUB46 and PUB48, encoding U-box E3 ubiquitin ligases, are essential for plant response to drought stress.

Authors:  Guy Adler; Zvia Konrad; Lyad Zamir; Amit Kumar Mishra; Dina Raveh; Dudy Bar-Zvi
Journal:  BMC Plant Biol       Date:  2017-01-11       Impact factor: 4.215

9.  The U-box family genes in Medicago truncatula: Key elements in response to salt, cold, and drought stresses.

Authors:  Jianbo Song; Xiaowei Mo; Haiqi Yang; Luming Yue; Jun Song; Beixin Mo
Journal:  PLoS One       Date:  2017-08-03       Impact factor: 3.240

10.  Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.).

Authors:  Qian-Wen Deng; Xiang-Dong Luo; Ya-Ling Chen; Yi Zhou; Fan-Tao Zhang; Biao-Lin Hu; Jian-Kun Xie
Journal:  Biol Res       Date:  2018-03-15       Impact factor: 5.612

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