| Literature DB >> 22199964 |
Jie Yang1.
Abstract
In the title mol-ecule, C(12)H(20)N(2)O(3), both five-membered rings are in envelope conformations. In the crystal, N-H⋯O hydrogen bonds link the mol-ecules into chains along [010].Entities:
Year: 2011 PMID: 22199964 PMCID: PMC3239116 DOI: 10.1107/S160053681105046X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H20N2O3 | |
| Monoclinic, | Mo |
| Hall symbol: C 2y | Cell parameters from 2422 reflections |
| θ = 1.1–27.5° | |
| µ = 0.09 mm−1 | |
| β = 97.029 (8)° | Platelet, colorless |
| 0.21 × 0.15 × 0.06 mm | |
| Rigaku Saturn 724+ diffractometer | 1557 independent reflections |
| Radiation source: rotating anode | 1452 reflections with |
| Confocal | |
| ω scans at fixed χ = 45° | θmax = 27.5°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 3265 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1557 reflections | (Δ/σ)max < 0.001 |
| 157 parameters | Δρmax = 0.23 e Å−3 |
| 1 restraint | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.2715 (2) | 0.4600 (3) | 0.43850 (10) | 0.0313 (5) | |
| O2 | 0.33362 (17) | 0.2042 (3) | 0.18571 (9) | 0.0289 (5) | |
| O3 | 0.55006 (19) | 0.1382 (4) | 0.19625 (10) | 0.0332 (5) | |
| N1 | 0.3406 (2) | 0.8081 (4) | 0.44345 (11) | 0.0255 (5) | |
| H1 | 0.3028 | 0.8474 | 0.4798 | 0.031* | |
| N2 | 0.4618 (2) | 0.3546 (4) | 0.27139 (12) | 0.0275 (5) | |
| C1 | 0.3315 (3) | 0.6117 (5) | 0.41741 (13) | 0.0219 (6) | |
| C2 | 0.4181 (3) | 0.9527 (5) | 0.40704 (14) | 0.0279 (6) | |
| H2B | 0.5037 | 0.9751 | 0.4339 | 0.033* | |
| H2A | 0.3750 | 1.0920 | 0.3984 | 0.033* | |
| C3 | 0.4286 (3) | 0.8347 (5) | 0.33812 (13) | 0.0234 (6) | |
| H3B | 0.5134 | 0.8596 | 0.3220 | 0.028* | |
| H3A | 0.3605 | 0.8813 | 0.3011 | 0.028* | |
| C4 | 0.4118 (3) | 0.5993 (5) | 0.35651 (13) | 0.0209 (5) | |
| C5 | 0.5419 (3) | 0.4915 (5) | 0.38093 (13) | 0.0241 (6) | |
| H5B | 0.6051 | 0.5963 | 0.4027 | 0.029* | |
| H5A | 0.5317 | 0.3766 | 0.4150 | 0.029* | |
| C6 | 0.5835 (3) | 0.4018 (5) | 0.31360 (15) | 0.0303 (7) | |
| H6B | 0.6336 | 0.5078 | 0.2902 | 0.036* | |
| H6A | 0.6357 | 0.2714 | 0.3230 | 0.036* | |
| C7 | 0.3515 (2) | 0.4573 (5) | 0.29695 (13) | 0.0233 (6) | |
| H7B | 0.2936 | 0.3505 | 0.3143 | 0.028* | |
| H7A | 0.3024 | 0.5428 | 0.2596 | 0.028* | |
| C8 | 0.4568 (2) | 0.2247 (5) | 0.21527 (13) | 0.0244 (6) | |
| C9 | 0.3028 (3) | 0.0912 (5) | 0.11865 (14) | 0.0290 (7) | |
| C10 | 0.3776 (3) | 0.1875 (7) | 0.06389 (15) | 0.0461 (9) | |
| H10A | 0.3444 | 0.1321 | 0.0176 | 0.069* | |
| H10C | 0.4686 | 0.1501 | 0.0745 | 0.069* | |
| H10B | 0.3683 | 0.3427 | 0.0641 | 0.069* | |
| C11 | 0.3283 (3) | −0.1464 (6) | 0.12960 (17) | 0.0381 (8) | |
| H11B | 0.2717 | −0.2031 | 0.1620 | 0.057* | |
| H11C | 0.4180 | −0.1680 | 0.1492 | 0.057* | |
| H11A | 0.3117 | −0.2205 | 0.0846 | 0.057* | |
| C12 | 0.1607 (3) | 0.1350 (7) | 0.10196 (17) | 0.0419 (8) | |
| H12A | 0.1281 | 0.0648 | 0.0579 | 0.063* | |
| H12C | 0.1466 | 0.2888 | 0.0974 | 0.063* | |
| H12B | 0.1154 | 0.0799 | 0.1398 | 0.063* |
| O1 | 0.0348 (12) | 0.0317 (11) | 0.0293 (10) | −0.0073 (10) | 0.0115 (8) | 0.0027 (10) |
| O2 | 0.0228 (10) | 0.0378 (11) | 0.0253 (9) | 0.0021 (10) | 0.0002 (7) | −0.0106 (10) |
| O3 | 0.0261 (11) | 0.0410 (13) | 0.0335 (10) | 0.0050 (10) | 0.0074 (8) | −0.0098 (10) |
| N1 | 0.0263 (12) | 0.0276 (13) | 0.0234 (11) | 0.0030 (11) | 0.0066 (9) | −0.0023 (11) |
| N2 | 0.0190 (11) | 0.0345 (13) | 0.0284 (11) | 0.0033 (11) | 0.0004 (9) | −0.0091 (11) |
| C1 | 0.0200 (13) | 0.0256 (13) | 0.0200 (11) | −0.0001 (12) | 0.0015 (10) | 0.0016 (11) |
| C2 | 0.0280 (15) | 0.0235 (13) | 0.0322 (14) | 0.0000 (13) | 0.0033 (11) | 0.0014 (13) |
| C3 | 0.0197 (13) | 0.0265 (14) | 0.0247 (12) | 0.0022 (12) | 0.0059 (10) | 0.0037 (12) |
| C4 | 0.0193 (12) | 0.0224 (13) | 0.0211 (11) | 0.0013 (12) | 0.0025 (10) | 0.0009 (11) |
| C5 | 0.0206 (13) | 0.0249 (14) | 0.0262 (13) | −0.0010 (12) | 0.0001 (10) | −0.0014 (12) |
| C6 | 0.0183 (13) | 0.0383 (18) | 0.0336 (14) | 0.0040 (13) | 0.0001 (11) | −0.0076 (13) |
| C7 | 0.0181 (13) | 0.0271 (13) | 0.0252 (12) | 0.0021 (12) | 0.0053 (10) | −0.0021 (12) |
| C8 | 0.0219 (13) | 0.0270 (14) | 0.0248 (13) | 0.0016 (12) | 0.0048 (10) | −0.0003 (12) |
| C9 | 0.0309 (15) | 0.0351 (16) | 0.0212 (13) | −0.0022 (14) | 0.0033 (11) | −0.0045 (13) |
| C10 | 0.048 (2) | 0.062 (3) | 0.0283 (15) | −0.009 (2) | 0.0058 (14) | 0.0031 (17) |
| C11 | 0.0388 (18) | 0.0359 (17) | 0.0394 (17) | −0.0022 (16) | 0.0030 (14) | −0.0081 (15) |
| C12 | 0.0337 (18) | 0.050 (2) | 0.0395 (17) | 0.0044 (17) | −0.0073 (14) | −0.0070 (17) |
| O1—C1 | 1.238 (3) | C5—C6 | 1.525 (4) |
| O2—C8 | 1.353 (3) | C5—H5B | 0.9900 |
| O2—C9 | 1.474 (3) | C5—H5A | 0.9900 |
| O3—C8 | 1.214 (3) | C6—H6B | 0.9900 |
| N1—C1 | 1.331 (4) | C6—H6A | 0.9900 |
| N1—C2 | 1.454 (4) | C7—H7B | 0.9900 |
| N1—H1 | 0.8800 | C7—H7A | 0.9900 |
| N2—C8 | 1.350 (3) | C9—C12 | 1.511 (4) |
| N2—C6 | 1.458 (4) | C9—C10 | 1.516 (4) |
| N2—C7 | 1.462 (3) | C9—C11 | 1.526 (5) |
| C1—C4 | 1.527 (4) | C10—H10A | 0.9800 |
| C2—C3 | 1.535 (4) | C10—H10C | 0.9800 |
| C2—H2B | 0.9900 | C10—H10B | 0.9800 |
| C2—H2A | 0.9900 | C11—H11B | 0.9800 |
| C3—C4 | 1.536 (4) | C11—H11C | 0.9800 |
| C3—H3B | 0.9900 | C11—H11A | 0.9800 |
| C3—H3A | 0.9900 | C12—H12A | 0.9800 |
| C4—C7 | 1.527 (4) | C12—H12C | 0.9800 |
| C4—C5 | 1.545 (4) | C12—H12B | 0.9800 |
| C8—O2—C9 | 120.7 (2) | N2—C6—H6A | 111.1 |
| C1—N1—C2 | 114.6 (2) | C5—C6—H6A | 111.1 |
| C1—N1—H1 | 122.7 | H6B—C6—H6A | 109.1 |
| C2—N1—H1 | 122.7 | N2—C7—C4 | 103.8 (2) |
| C8—N2—C6 | 121.0 (2) | N2—C7—H7B | 111.0 |
| C8—N2—C7 | 125.5 (2) | C4—C7—H7B | 111.0 |
| C6—N2—C7 | 113.5 (2) | N2—C7—H7A | 111.0 |
| O1—C1—N1 | 127.3 (3) | C4—C7—H7A | 111.0 |
| O1—C1—C4 | 124.3 (3) | H7B—C7—H7A | 109.0 |
| N1—C1—C4 | 108.4 (2) | O3—C8—N2 | 123.9 (3) |
| N1—C2—C3 | 102.6 (2) | O3—C8—O2 | 126.5 (3) |
| N1—C2—H2B | 111.2 | N2—C8—O2 | 109.6 (2) |
| C3—C2—H2B | 111.2 | O2—C9—C12 | 101.8 (2) |
| N1—C2—H2A | 111.2 | O2—C9—C10 | 109.8 (3) |
| C3—C2—H2A | 111.2 | C12—C9—C10 | 111.2 (3) |
| H2B—C2—H2A | 109.2 | O2—C9—C11 | 109.5 (2) |
| C2—C3—C4 | 104.1 (2) | C12—C9—C11 | 111.1 (3) |
| C2—C3—H3B | 110.9 | C10—C9—C11 | 112.9 (3) |
| C4—C3—H3B | 110.9 | C9—C10—H10A | 109.5 |
| C2—C3—H3A | 110.9 | C9—C10—H10C | 109.5 |
| C4—C3—H3A | 110.9 | H10A—C10—H10C | 109.5 |
| H3B—C3—H3A | 109.0 | C9—C10—H10B | 109.5 |
| C1—C4—C7 | 112.9 (2) | H10A—C10—H10B | 109.5 |
| C1—C4—C3 | 102.6 (2) | H10C—C10—H10B | 109.5 |
| C7—C4—C3 | 116.0 (2) | C9—C11—H11B | 109.5 |
| C1—C4—C5 | 109.8 (2) | C9—C11—H11C | 109.5 |
| C7—C4—C5 | 104.0 (2) | H11B—C11—H11C | 109.5 |
| C3—C4—C5 | 111.7 (2) | C9—C11—H11A | 109.5 |
| C6—C5—C4 | 103.8 (2) | H11B—C11—H11A | 109.5 |
| C6—C5—H5B | 111.0 | H11C—C11—H11A | 109.5 |
| C4—C5—H5B | 111.0 | C9—C12—H12A | 109.5 |
| C6—C5—H5A | 111.0 | C9—C12—H12C | 109.5 |
| C4—C5—H5A | 111.0 | H12A—C12—H12C | 109.5 |
| H5B—C5—H5A | 109.0 | C9—C12—H12B | 109.5 |
| N2—C6—C5 | 103.1 (2) | H12A—C12—H12B | 109.5 |
| N2—C6—H6B | 111.1 | H12C—C12—H12B | 109.5 |
| C5—C6—H6B | 111.1 | ||
| C2—N1—C1—O1 | −179.7 (3) | C7—N2—C6—C5 | 15.7 (3) |
| C2—N1—C1—C4 | 1.7 (3) | C4—C5—C6—N2 | −30.5 (3) |
| C1—N1—C2—C3 | 15.7 (3) | C8—N2—C7—C4 | −175.1 (3) |
| N1—C2—C3—C4 | −25.8 (3) | C6—N2—C7—C4 | 5.9 (3) |
| O1—C1—C4—C7 | 37.5 (4) | C1—C4—C7—N2 | −143.8 (2) |
| N1—C1—C4—C7 | −143.8 (2) | C3—C4—C7—N2 | 98.2 (3) |
| O1—C1—C4—C3 | 163.1 (3) | C5—C4—C7—N2 | −24.9 (3) |
| N1—C1—C4—C3 | −18.2 (3) | C6—N2—C8—O3 | 0.5 (4) |
| O1—C1—C4—C5 | −78.0 (3) | C7—N2—C8—O3 | −178.4 (3) |
| N1—C1—C4—C5 | 100.7 (3) | C6—N2—C8—O2 | 179.2 (3) |
| C2—C3—C4—C1 | 26.7 (3) | C7—N2—C8—O2 | 0.3 (4) |
| C2—C3—C4—C7 | 150.2 (2) | C9—O2—C8—O3 | −8.6 (4) |
| C2—C3—C4—C5 | −90.8 (2) | C9—O2—C8—N2 | 172.7 (2) |
| C1—C4—C5—C6 | 155.7 (2) | C8—O2—C9—C12 | −172.4 (3) |
| C7—C4—C5—C6 | 34.6 (3) | C8—O2—C9—C10 | −54.6 (4) |
| C3—C4—C5—C6 | −91.2 (3) | C8—O2—C9—C11 | 69.9 (3) |
| C8—N2—C6—C5 | −163.3 (3) |
| H··· | ||||
| N1—H1···O1i | 0.88 | 1.97 | 2.848 (3) | 175. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.88 | 1.97 | 2.848 (3) | 175 |
Symmetry code: (i) .