Literature DB >> 22199898

5,8-Dibromo-15-cyano-2,11-dithia-[3.3]paracyclo-phane.

Hua Zhang1, Wenju Liu.   

Abstract

IN THE TITLE COMPOUND [SYSTEMATIC NAME: 13,15-dibromo-3,10-dithia-tricyclo-[10.2.2.2(5,8)]octa-deca-1(14),5,7,12,15,17-hexa-ene-6-carbonitrile], C(17)H(13)Br(2)NS(2), the mean planes of the benzene rings are almost parallel, making a dihedral angle of 1.1 (2)°, and the distance between the ring centroids is 3.294 (3) Å, which is shorter than the normal packing distance of aromatic rings (about 3.4 Å), indicating a strong π-π inter-action. The S atom of one bridging chain is disorderd over two positions with site occupancies of 0.605 (4) and 0.395 (4) for the major and minor components, respectively.

Entities:  

Year:  2011        PMID: 22199898      PMCID: PMC3239050          DOI: 10.1107/S1600536811048458

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound, see: Wang et al. (2006 ▶). For related structures, see: Clément et al. (2009 ▶); Jin & Lu (2010 ▶).

Experimental

Crystal data

C17H13Br2NS2 M = 455.22 Triclinic, a = 6.9433 (11) Å b = 9.0591 (14) Å c = 13.888 (2) Å α = 79.825 (2)° β = 85.047 (3)° γ = 76.275 (2)° V = 834.4 (2) Å3 Z = 2 Mo Kα radiation μ = 5.10 mm−1 T = 298 K 0.2 × 0.2 × 0.2 mm

Data collection

Bruker SMART CCD area-detector diffractometer 5570 measured reflections 3395 independent reflections 2589 reflections with I > 2σ(I) R int = 0.098

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.152 S = 0.99 3395 reflections 209 parameters H-atom parameters constrained Δρmax = 1.39 e Å−3 Δρmin = −0.79 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811048458/zq2128sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048458/zq2128Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811048458/zq2128Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H13Br2NS2Z = 2
Mr = 455.22F(000) = 448
Triclinic, P1Dx = 1.812 Mg m3Dm = 1.812 Mg m3Dm measured by not measured
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9433 (11) ÅCell parameters from 2268 reflections
b = 9.0591 (14) Åθ = 2.6–26.9°
c = 13.888 (2) ŵ = 5.10 mm1
α = 79.825 (2)°T = 298 K
β = 85.047 (3)°Block, colourless
γ = 76.275 (2)°0.2 × 0.2 × 0.2 mm
V = 834.4 (2) Å3
Bruker SMART CCD area-detector diffractometer2589 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.098
graphiteθmax = 26.5°, θmin = 2.6°
phi and ω scansh = −8→8
5570 measured reflectionsk = −8→11
3395 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.152H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0859P)2] where P = (Fo2 + 2Fc2)/3
3395 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 1.39 e Å3
0 restraintsΔρmin = −0.79 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Br10.19006 (10)0.46219 (7)0.63111 (4)0.0629 (2)
Br20.19842 (8)−0.21517 (6)0.88825 (4)0.0464 (2)
C10.1424 (6)0.2546 (5)0.8092 (3)0.0361 (10)
C20.1398 (7)0.1089 (6)0.8587 (3)0.0356 (10)
H20.08890.09720.92300.043*
C30.2114 (7)−0.0199 (5)0.8146 (3)0.0339 (10)
C40.2923 (7)−0.0096 (6)0.7187 (3)0.0369 (11)
C50.2780 (7)0.1387 (6)0.6673 (4)0.0415 (11)
H50.32070.15110.60160.050*
C60.2027 (7)0.2682 (6)0.7104 (3)0.0368 (10)
C70.0888 (8)0.3899 (6)0.8638 (4)0.0453 (12)
H7A−0.04090.39250.89650.054*
H7B0.07950.48410.81700.054*
C80.4903 (8)0.4041 (6)0.8808 (4)0.0415 (11)
H8A0.45780.49270.82960.050*
H8B0.58280.42510.92230.050*
C90.5938 (6)0.2654 (5)0.8335 (3)0.0348 (10)
C100.6660 (7)0.2871 (6)0.7371 (3)0.0379 (11)
H100.66460.38580.70370.045*
C110.7408 (7)0.1592 (6)0.6908 (3)0.0356 (10)
C120.7430 (7)0.0109 (6)0.7372 (3)0.0364 (10)
C130.6858 (7)−0.0087 (6)0.8371 (3)0.0373 (10)
H130.6966−0.10740.87240.045*
C140.6140 (7)0.1168 (6)0.8829 (3)0.0364 (10)
H140.57770.10130.94930.044*
C150.8063 (8)0.1878 (7)0.5885 (4)0.0468 (12)
C160.7960 (8)−0.1264 (6)0.6838 (4)0.0482 (13)
H16A0.9294−0.18360.69940.058*0.395 (4)
H16B0.7961−0.08950.61380.058*0.395 (4)
H16C0.8168−0.21920.73230.058*0.605 (4)
H16D0.9207−0.12520.64670.058*0.605 (4)
C170.3949 (8)−0.1478 (7)0.6717 (4)0.0516 (14)
H17A0.4111−0.11280.60190.062*0.395 (4)
H17B0.3062−0.21780.67980.062*0.395 (4)
H17C0.3017−0.16860.63050.062*0.605 (4)
H17D0.4250−0.23590.72340.062*0.605 (4)
N10.8583 (9)0.2087 (7)0.5092 (4)0.0690 (15)
S10.26512 (19)0.38462 (15)0.95384 (9)0.0416 (3)
S20.6293 (3)−0.2551 (2)0.71362 (17)0.0475 (7)0.605 (4)
S2'0.6129 (6)−0.1365 (5)0.6023 (2)0.0512 (11)0.395 (4)
U11U22U33U12U13U23
Br10.0747 (5)0.0392 (4)0.0662 (4)−0.0073 (3)−0.0055 (3)0.0078 (3)
Br20.0501 (3)0.0295 (3)0.0566 (3)−0.0066 (2)0.0044 (2)−0.0060 (2)
C10.025 (2)0.026 (2)0.056 (3)0.0008 (18)−0.0029 (19)−0.012 (2)
C20.030 (2)0.035 (3)0.043 (2)−0.006 (2)0.0038 (18)−0.012 (2)
C30.030 (2)0.026 (2)0.044 (2)−0.0042 (19)0.0019 (18)−0.007 (2)
C40.028 (2)0.039 (3)0.046 (3)−0.007 (2)0.0014 (19)−0.016 (2)
C50.035 (3)0.048 (3)0.041 (3)−0.007 (2)−0.002 (2)−0.006 (2)
C60.031 (2)0.030 (2)0.048 (3)−0.0033 (19)−0.0022 (19)−0.006 (2)
C70.040 (3)0.033 (3)0.060 (3)0.001 (2)0.002 (2)−0.016 (2)
C80.039 (3)0.029 (3)0.056 (3)−0.005 (2)0.008 (2)−0.016 (2)
C90.027 (2)0.031 (3)0.046 (3)−0.0044 (19)0.0043 (18)−0.012 (2)
C100.035 (2)0.031 (3)0.048 (3)−0.008 (2)0.001 (2)−0.007 (2)
C110.027 (2)0.039 (3)0.039 (2)−0.006 (2)0.0017 (18)−0.008 (2)
C120.026 (2)0.038 (3)0.044 (3)−0.002 (2)0.0026 (18)−0.012 (2)
C130.032 (2)0.031 (3)0.044 (3)0.000 (2)0.0033 (19)−0.005 (2)
C140.032 (2)0.037 (3)0.038 (2)−0.006 (2)0.0046 (18)−0.006 (2)
C150.047 (3)0.047 (3)0.044 (3)−0.005 (3)0.005 (2)−0.012 (2)
C160.039 (3)0.040 (3)0.066 (3)−0.005 (2)0.016 (2)−0.023 (3)
C170.050 (3)0.043 (3)0.066 (3)−0.009 (3)0.007 (3)−0.027 (3)
N10.088 (4)0.063 (4)0.055 (3)−0.021 (3)0.014 (3)−0.009 (3)
S10.0478 (7)0.0338 (7)0.0433 (7)−0.0065 (6)0.0111 (5)−0.0165 (5)
S20.0434 (12)0.0253 (11)0.0718 (15)−0.0028 (9)0.0121 (10)−0.0163 (10)
S2'0.056 (2)0.058 (2)0.0412 (18)−0.0094 (18)0.0122 (15)−0.0259 (16)
Br1—C61.889 (5)C11—C121.381 (7)
Br2—C31.899 (5)C11—C151.451 (7)
C1—C21.379 (6)C12—C131.401 (7)
C1—C61.393 (7)C12—C161.515 (7)
C1—C71.510 (7)C13—C141.370 (7)
C2—C31.381 (7)C13—H130.9300
C2—H20.9300C14—H140.9300
C3—C41.397 (6)C15—N11.126 (7)
C4—C51.391 (7)C16—S2'1.802 (7)
C4—C171.512 (7)C16—S21.805 (5)
C5—C61.383 (7)C16—H16A0.9700
C5—H50.9300C16—H16B0.9700
C7—S11.811 (5)C16—H16C0.9700
C7—H7A0.9700C16—H16D0.9700
C7—H7B0.9700C17—S2'1.737 (6)
C8—C91.519 (7)C17—S21.774 (6)
C8—S11.816 (5)C17—H17A0.9700
C8—H8A0.9700C17—H17B0.9700
C8—H8B0.9700C17—H17C0.9700
C9—C141.380 (7)C17—H17D0.9700
C9—C101.385 (6)S2—H16C1.4691
C10—C111.396 (7)S2—H17D1.3851
C10—H100.9300
C2—C1—C6117.4 (4)C12—C16—S2'115.1 (4)
C2—C1—C7119.6 (4)C12—C16—S2113.9 (4)
C6—C1—C7123.0 (4)S2'—C16—S256.8 (2)
C1—C2—C3121.3 (4)C12—C16—H16A108.8
C1—C2—H2119.3S2'—C16—H16A135.9
C3—C2—H2119.3S2—C16—H16A108.8
C2—C3—C4121.9 (4)C12—C16—H16B108.8
C2—C3—Br2118.2 (3)S2'—C16—H16B54.2
C4—C3—Br2119.9 (4)S2—C16—H16B108.8
C5—C4—C3115.8 (4)H16A—C16—H16B107.7
C5—C4—C17120.5 (4)C12—C16—H16C108.1
C3—C4—C17123.7 (5)S2'—C16—H16C108.4
C6—C5—C4122.3 (4)S2—C16—H16C54.4
C6—C5—H5118.8H16A—C16—H16C59.6
C4—C5—H5118.8H16B—C16—H16C143.1
C5—C6—C1120.6 (4)C12—C16—H16D108.8
C5—C6—Br1117.6 (4)S2'—C16—H16D108.7
C1—C6—Br1121.7 (4)S2—C16—H16D137.0
C1—C7—S1113.7 (4)H16A—C16—H16D50.1
C1—C7—H7A108.8H16B—C16—H16D60.1
S1—C7—H7A108.8H16C—C16—H16D107.4
C1—C7—H7B108.8C4—C17—S2'117.2 (4)
S1—C7—H7B108.8C4—C17—S2118.4 (4)
H7A—C7—H7B107.7S2'—C17—S258.5 (2)
C9—C8—S1115.4 (3)C4—C17—H17A107.7
C9—C8—H8A108.4S2'—C17—H17A51.6
S1—C8—H8A108.4S2—C17—H17A107.7
C9—C8—H8B108.4C4—C17—H17B107.7
S1—C8—H8B108.4S2'—C17—H17B134.1
H8A—C8—H8B107.5S2—C17—H17B107.7
C14—C9—C10118.5 (4)H17A—C17—H17B107.1
C14—C9—C8121.9 (4)C4—C17—H17C108.2
C10—C9—C8119.6 (4)S2'—C17—H17C108.3
C9—C10—C11119.2 (4)S2—C17—H17C132.5
C9—C10—H10120.4H17A—C17—H17C63.7
C11—C10—H10120.4H17B—C17—H17C45.3
C12—C11—C10122.2 (4)C4—C17—H17D107.8
C12—C11—C15120.3 (5)S2'—C17—H17D107.7
C10—C11—C15117.3 (4)S2—C17—H17D50.9
C11—C12—C13117.2 (4)H17A—C17—H17D144.4
C11—C12—C16122.7 (4)H17B—C17—H17D64.1
C13—C12—C16120.1 (4)H17C—C17—H17D107.1
C14—C13—C12120.3 (4)C7—S1—C8103.7 (2)
C14—C13—H13119.8C17—S2—C16106.1 (3)
C12—C13—H13119.8C17—S2—H16C135.9
C13—C14—C9122.0 (4)C16—S2—H17D134.8
C13—C14—H14119.0H16C—S2—H17D152.9
C9—C14—H14119.0C17—S2'—C16107.8 (3)
N1—C15—C11179.4 (7)
C6—C1—C2—C35.8 (7)C10—C11—C12—C16171.0 (5)
C7—C1—C2—C3−171.8 (4)C15—C11—C12—C16−5.2 (7)
C1—C2—C3—C40.9 (7)C11—C12—C13—C145.8 (7)
C1—C2—C3—Br2−179.2 (3)C16—C12—C13—C14−171.8 (5)
C2—C3—C4—C5−6.2 (7)C12—C13—C14—C90.5 (7)
Br2—C3—C4—C5174.0 (3)C10—C9—C14—C13−6.2 (7)
C2—C3—C4—C17172.2 (5)C8—C9—C14—C13172.1 (5)
Br2—C3—C4—C17−7.6 (6)C11—C12—C16—S2'−71.3 (6)
C3—C4—C5—C64.9 (7)C13—C12—C16—S2'106.1 (5)
C17—C4—C5—C6−173.7 (5)C11—C12—C16—S2−134.3 (4)
C4—C5—C6—C11.8 (7)C13—C12—C16—S243.1 (6)
C4—C5—C6—Br1−179.4 (3)C5—C4—C17—S2'41.4 (7)
C2—C1—C6—C5−7.2 (7)C3—C4—C17—S2'−137.1 (5)
C7—C1—C6—C5170.4 (5)C5—C4—C17—S2108.4 (5)
C2—C1—C6—Br1174.1 (3)C3—C4—C17—S2−70.0 (6)
C7—C1—C6—Br1−8.4 (6)C1—C7—S1—C865.3 (4)
C2—C1—C7—S166.7 (5)C9—C8—S1—C7−70.7 (4)
C6—C1—C7—S1−110.8 (5)C4—C17—S2—C16−64.2 (5)
S1—C8—C9—C14−41.7 (6)S2'—C17—S2—C1642.0 (3)
S1—C8—C9—C10136.6 (4)C12—C16—S2—C1764.3 (5)
C14—C9—C10—C115.4 (7)S2'—C16—S2—C17−41.1 (3)
C8—C9—C10—C11−172.9 (4)C4—C17—S2'—C1665.6 (5)
C9—C10—C11—C120.9 (7)S2—C17—S2'—C16−42.6 (3)
C9—C10—C11—C15177.2 (4)C12—C16—S2'—C17−60.5 (5)
C10—C11—C12—C13−6.5 (7)S2—C16—S2'—C1742.6 (3)
C15—C11—C12—C13177.3 (4)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4,12-Bis(2,2-dibromo-vinyl)[2.2]paracyclo-phane.

Authors:  Sébastien Clément; Laurent Guyard; Michael Knorr; Christian Däschlein; Carsten Strohmann
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-13

3.  5,8-Dibromo-15,18-dimeth-oxy-2,11-dithia-[3.3]paracyclo-phane.

Authors:  Guojun Jin; Yinghui Lu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-31

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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