| Literature DB >> 22199889 |
Abstract
The title compound, C(11)H(8)Br(2)N(4), is a Schiff base obtained from 6-bromo-picolinaldehyde and 5-bromo-pyridine-3,4-diamine. The mol-ecule has an E configuration about the C=N bond and the dihedral angle between the two pyridine rings is 14.02 (1)°. The observed conformation is stabilised by an intramolecular N-H⋯N hydrogen bond. In the crystal, mol-ecules are stacked along the b axis and are linked through N-H⋯N hydrogen bonds into chains along the c axis.Entities:
Year: 2011 PMID: 22199889 PMCID: PMC3239041 DOI: 10.1107/S1600536811047702
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H8Br2N4 | |
| Monoclinic, | Mo |
| Cell parameters from 2086 reflections | |
| θ = 1.7–27.9° | |
| µ = 6.94 mm−1 | |
| β = 126.116 (14)° | |
| Prism, colorless | |
| 0.20 × 0.18 × 0.12 mm |
| Rigaku Saturn 724CCD diffractometer | 2282 independent reflections |
| Radiation source: rotating anode | 2070 reflections with |
| multilayer | |
| Detector resolution: 14.22 pixels mm-1 | θmax = 26.4°, θmin = 2.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5047 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.45 e Å−3 | |
| 2282 reflections | Δρmin = −0.63 e Å−3 |
| 118 parameters | Extinction correction: |
| 38 restraints | Extinction coefficient: 0.00177 (14) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1093 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.002 (12) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | −0.32411 (2) | −1.16292 (13) | −0.65216 (3) | 0.01513 (13) | |
| Br2 | −0.60799 (2) | 0.03838 (13) | −0.34064 (3) | 0.01849 (14) | |
| C6 | −0.4590 (3) | −0.6690 (12) | −0.5248 (4) | 0.0102 (6) | |
| H6 | −0.4959 | −0.7657 | −0.5913 | 0.012* | |
| C1 | −0.3284 (3) | −0.9595 (12) | −0.5398 (4) | 0.0102 (7) | |
| C9 | −0.5986 (3) | −0.1427 (11) | −0.4469 (4) | 0.0102 (6) | |
| N2 | −0.4692 (2) | −0.4839 (10) | −0.4673 (3) | 0.0102 (6) | |
| C4 | −0.3354 (3) | −0.6323 (13) | −0.3902 (4) | 0.0117 (12) | |
| H4 | −0.3393 | −0.5114 | −0.3393 | 0.014* | |
| C5 | −0.3928 (3) | −0.7397 (13) | −0.4927 (4) | 0.0102 (7) | |
| C8 | −0.5367 (3) | −0.2611 (13) | −0.4152 (4) | 0.0102 (6) | |
| N1 | −0.3883 (2) | −0.9064 (10) | −0.5679 (3) | 0.0102 (10) | |
| N3 | −0.6504 (2) | −0.2897 (11) | −0.6358 (3) | 0.0160 (11) | |
| C2 | −0.2699 (3) | −0.8765 (12) | −0.4417 (4) | 0.0102 (7) | |
| H2 | −0.2282 | −0.9341 | −0.4266 | 0.012* | |
| C10 | −0.6531 (3) | −0.1634 (12) | −0.5552 (4) | 0.0102 (6) | |
| H10 | −0.6947 | −0.0846 | −0.5738 | 0.012* | |
| N4 | −0.4818 (2) | −0.2585 (10) | −0.3118 (3) | 0.0156 (10) | |
| H4A | −0.4834 | −0.1785 | −0.2587 | 0.019* | |
| H4B | −0.4441 | −0.3367 | −0.2969 | 0.019* | |
| C3 | −0.2743 (3) | −0.7040 (13) | −0.3652 (4) | 0.0136 (12) | |
| H3 | −0.2353 | −0.6368 | −0.2963 | 0.016* | |
| C11 | −0.5907 (3) | −0.3985 (12) | −0.6050 (4) | 0.0127 (13) | |
| H11 | −0.5878 | −0.4893 | −0.6606 | 0.015* | |
| C7 | −0.5329 (3) | −0.3906 (12) | −0.4994 (4) | 0.0102 (6) |
| Br1 | 0.0168 (3) | 0.0139 (3) | 0.0191 (3) | 0.0022 (2) | 0.0129 (2) | −0.0024 (2) |
| Br2 | 0.0207 (3) | 0.0179 (3) | 0.0219 (3) | 0.0026 (3) | 0.0153 (3) | −0.0004 (3) |
| C6 | 0.0118 (15) | 0.0111 (14) | 0.0086 (13) | −0.0005 (15) | 0.0064 (12) | 0.0002 (13) |
| C1 | 0.0100 (17) | 0.0077 (15) | 0.0135 (17) | −0.0007 (12) | 0.0073 (14) | 0.0026 (12) |
| C9 | 0.0122 (15) | 0.0052 (13) | 0.0154 (14) | −0.0006 (10) | 0.0094 (12) | 0.0015 (10) |
| N2 | 0.0118 (15) | 0.0111 (14) | 0.0086 (13) | −0.0005 (15) | 0.0064 (12) | 0.0002 (13) |
| C4 | 0.018 (3) | 0.010 (3) | 0.010 (3) | 0.001 (2) | 0.010 (3) | 0.002 (2) |
| C5 | 0.0100 (17) | 0.0077 (15) | 0.0135 (17) | −0.0007 (12) | 0.0073 (14) | 0.0026 (12) |
| C8 | 0.0122 (15) | 0.0052 (13) | 0.0154 (14) | −0.0006 (10) | 0.0094 (12) | 0.0015 (10) |
| N1 | 0.013 (3) | 0.008 (2) | 0.008 (2) | −0.0011 (18) | 0.006 (2) | 0.0017 (17) |
| N3 | 0.009 (3) | 0.023 (3) | 0.012 (2) | 0.003 (2) | 0.004 (2) | 0.0014 (19) |
| C2 | 0.0100 (17) | 0.0077 (15) | 0.0135 (17) | −0.0007 (12) | 0.0073 (14) | 0.0026 (12) |
| C10 | 0.0122 (15) | 0.0052 (13) | 0.0154 (14) | −0.0006 (10) | 0.0094 (12) | 0.0015 (10) |
| N4 | 0.005 (2) | 0.031 (3) | 0.010 (2) | 0.0035 (19) | 0.004 (2) | −0.0036 (18) |
| C3 | 0.008 (3) | 0.017 (3) | 0.008 (3) | −0.003 (2) | 0.000 (2) | 0.004 (2) |
| C11 | 0.016 (3) | 0.011 (3) | 0.012 (3) | 0.002 (2) | 0.009 (3) | 0.000 (2) |
| C7 | 0.0122 (15) | 0.0052 (13) | 0.0154 (14) | −0.0006 (10) | 0.0094 (12) | 0.0015 (10) |
| Br1—C1 | 1.925 (5) | C5—N1 | 1.363 (6) |
| Br2—C9 | 1.884 (5) | C8—N4 | 1.337 (6) |
| C6—N2 | 1.256 (5) | C8—C7 | 1.418 (7) |
| C6—C5 | 1.447 (7) | N3—C11 | 1.339 (6) |
| C6—H6 | 0.9500 | N3—C10 | 1.347 (5) |
| C1—N1 | 1.305 (7) | C2—C3 | 1.389 (7) |
| C1—C2 | 1.370 (7) | C2—H2 | 0.9500 |
| C9—C10 | 1.380 (6) | C10—H10 | 0.9500 |
| C9—C8 | 1.397 (7) | N4—H4A | 0.8800 |
| N2—C7 | 1.407 (7) | N4—H4B | 0.8800 |
| C4—C3 | 1.363 (7) | C3—H3 | 0.9500 |
| C4—C5 | 1.414 (7) | C11—C7 | 1.382 (7) |
| C4—H4 | 0.9500 | C11—H11 | 0.9500 |
| N2—C6—C5 | 122.0 (4) | C11—N3—C10 | 115.9 (5) |
| N2—C6—H6 | 119.0 | C1—C2—C3 | 116.9 (5) |
| C5—C6—H6 | 119.0 | C1—C2—H2 | 121.6 |
| N1—C1—C2 | 127.0 (5) | C3—C2—H2 | 121.6 |
| N1—C1—Br1 | 115.1 (4) | N3—C10—C9 | 123.4 (5) |
| C2—C1—Br1 | 117.9 (4) | N3—C10—H10 | 118.3 |
| C10—C9—C8 | 120.4 (5) | C9—C10—H10 | 118.3 |
| C10—C9—Br2 | 119.9 (4) | C8—N4—H4A | 120.0 |
| C8—C9—Br2 | 119.6 (4) | C8—N4—H4B | 120.0 |
| C6—N2—C7 | 123.5 (4) | H4A—N4—H4B | 120.0 |
| C3—C4—C5 | 119.4 (5) | C4—C3—C2 | 119.2 (5) |
| C3—C4—H4 | 120.3 | C4—C3—H3 | 120.4 |
| C5—C4—H4 | 120.3 | C2—C3—H3 | 120.4 |
| N1—C5—C4 | 121.3 (5) | N3—C11—C7 | 125.8 (5) |
| N1—C5—C6 | 116.6 (5) | N3—C11—H11 | 117.1 |
| C4—C5—C6 | 122.1 (5) | C7—C11—H11 | 117.1 |
| N4—C8—C9 | 124.2 (5) | C11—C7—N2 | 126.2 (5) |
| N4—C8—C7 | 119.0 (5) | C11—C7—C8 | 117.7 (5) |
| C9—C8—C7 | 116.8 (5) | N2—C7—C8 | 116.0 (5) |
| C1—N1—C5 | 116.2 (4) | ||
| C5—C6—N2—C7 | 175.6 (5) | C11—N3—C10—C9 | 0.3 (7) |
| C3—C4—C5—N1 | −1.5 (7) | C8—C9—C10—N3 | −1.1 (7) |
| C3—C4—C5—C6 | −179.4 (4) | Br2—C9—C10—N3 | −180.0 (4) |
| N2—C6—C5—N1 | −172.0 (4) | C5—C4—C3—C2 | 1.0 (7) |
| N2—C6—C5—C4 | 6.0 (7) | C1—C2—C3—C4 | 1.0 (7) |
| C10—C9—C8—N4 | −178.3 (4) | C10—N3—C11—C7 | −0.2 (8) |
| Br2—C9—C8—N4 | 0.6 (7) | N3—C11—C7—N2 | −175.7 (5) |
| C10—C9—C8—C7 | 1.8 (7) | N3—C11—C7—C8 | 1.0 (8) |
| Br2—C9—C8—C7 | −179.3 (3) | C6—N2—C7—C11 | −19.0 (8) |
| C2—C1—N1—C5 | 2.4 (7) | C6—N2—C7—C8 | 164.2 (4) |
| Br1—C1—N1—C5 | −175.4 (3) | N4—C8—C7—C11 | 178.4 (4) |
| C4—C5—N1—C1 | −0.1 (7) | C9—C8—C7—C11 | −1.7 (7) |
| C6—C5—N1—C1 | 177.9 (4) | N4—C8—C7—N2 | −4.5 (7) |
| N1—C1—C2—C3 | −2.9 (7) | C9—C8—C7—N2 | 175.4 (4) |
| Br1—C1—C2—C3 | 174.9 (3) |
| H··· | ||||
| N4—H4B···N2 | 0.88 | 2.33 | 2.686 (6) | 104. |
| N4—H4A···N1i | 0.88 | 2.44 | 3.043 (5) | 126. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.88 | 2.33 | 2.686 (6) | 104 |
| N4—H4 | 0.88 | 2.44 | 3.043 (5) | 126 |
Symmetry code: (i) .