| Literature DB >> 22199881 |
Henok H Kinfe, Augustine Hamese, Tanya Hughes, Bernard Omondi.
Abstract
In the crystal structure of the title compound, C(21)H(22)NOP, the amine H atom is involved in N-H⋯O hydrogen-bonding inter-actions, resulting in chains along the c axis. The crystal lattice is consolidated by weak inter-molecular C-H⋯π inter-actions.Entities:
Year: 2011 PMID: 22199881 PMCID: PMC3239033 DOI: 10.1107/S1600536811049014
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H22NOP | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 14165 reflections |
| θ = 3.6–66.2° | |
| µ = 1.42 mm−1 | |
| β = 107.578 (1)° | Needle, colourless |
| 0.48 × 0.08 × 0.02 mm | |
| Bruker X8 APEXII 4K KappaCCD diffractometer | 2772 reflections with |
| graphite | |
| φ and ω scans | θmax = 66.2°, θmin = 3.6° |
| Absorption correction: multi-scan ( | |
| 13806 measured reflections | |
| 2946 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2946 reflections | (Δ/σ)max = 0.001 |
| 218 parameters | Δρmax = 0.57 e Å−3 |
| 0 restraints | Δρmin = −0.57 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.98660 (15) | 0.18270 (12) | 0.8933 (2) | 0.0197 (4) | |
| C2 | 1.09281 (16) | 0.21294 (13) | 0.9436 (2) | 0.0250 (4) | |
| H2 | 1.1152 | 0.2556 | 0.8857 | 0.03* | |
| C3 | 1.16615 (17) | 0.18153 (14) | 1.0770 (2) | 0.0286 (5) | |
| H3 | 1.2384 | 0.2026 | 1.1098 | 0.034* | |
| C4 | 1.13436 (16) | 0.11951 (13) | 1.1627 (2) | 0.0258 (5) | |
| H4 | 1.1847 | 0.0976 | 1.2538 | 0.031* | |
| C5 | 1.02898 (16) | 0.08980 (13) | 1.1148 (2) | 0.0245 (4) | |
| H5 | 1.0065 | 0.0477 | 1.1736 | 0.029* | |
| C6 | 0.95550 (15) | 0.12126 (12) | 0.9808 (2) | 0.0222 (4) | |
| H6 | 0.8831 | 0.1004 | 0.9489 | 0.027* | |
| C7 | 0.91011 (15) | 0.21860 (13) | 0.7457 (2) | 0.0236 (4) | |
| H7A | 0.9099 | 0.2815 | 0.7531 | 0.028* | |
| H7B | 0.9373 | 0.2033 | 0.6585 | 0.028* | |
| C8 | 0.75770 (15) | 0.10376 (13) | 0.4367 (2) | 0.0215 (4) | |
| C9 | 0.82914 (15) | 0.04046 (13) | 0.5135 (2) | 0.0248 (4) | |
| H9 | 0.8565 | 0.0413 | 0.6228 | 0.03* | |
| C10 | 0.86062 (17) | −0.02365 (14) | 0.4320 (3) | 0.0325 (5) | |
| H10 | 0.9095 | −0.0665 | 0.4852 | 0.039* | |
| C11 | 0.82036 (19) | −0.02514 (16) | 0.2719 (3) | 0.0382 (6) | |
| H11 | 0.8413 | −0.0692 | 0.2153 | 0.046* | |
| C12 | 0.7494 (2) | 0.03806 (16) | 0.1952 (3) | 0.0383 (6) | |
| H12 | 0.7225 | 0.0372 | 0.0858 | 0.046* | |
| C13 | 0.71770 (17) | 0.10198 (14) | 0.2759 (2) | 0.0295 (5) | |
| H13 | 0.6688 | 0.1447 | 0.2223 | 0.035* | |
| C14 | 0.58144 (16) | 0.17310 (13) | 0.5493 (2) | 0.0237 (4) | |
| C15 | 0.50497 (17) | 0.23235 (14) | 0.4639 (2) | 0.0291 (5) | |
| H15 | 0.528 | 0.2767 | 0.41 | 0.035* | |
| C16 | 0.39696 (17) | 0.22687 (15) | 0.4572 (3) | 0.0338 (5) | |
| H16 | 0.346 | 0.2675 | 0.4004 | 0.041* | |
| C17 | 0.36414 (17) | 0.16148 (15) | 0.5343 (3) | 0.0313 (5) | |
| H17 | 0.2899 | 0.1569 | 0.5296 | 0.038* | |
| C18 | 0.43787 (16) | 0.10283 (14) | 0.6179 (2) | 0.0278 (5) | |
| H18 | 0.4133 | 0.0584 | 0.6699 | 0.033* | |
| C19 | 0.54819 (16) | 0.10689 (13) | 0.6284 (2) | 0.0247 (4) | |
| C20 | 0.62697 (16) | 0.04282 (14) | 0.7234 (2) | 0.0288 (5) | |
| H20A | 0.6801 | 0.0735 | 0.8083 | 0.035* | |
| H20B | 0.6675 | 0.0175 | 0.6578 | 0.035* | |
| C21 | 0.57827 (18) | −0.02982 (15) | 0.7939 (3) | 0.0341 (5) | |
| H21A | 0.5395 | −0.0061 | 0.8619 | 0.051* | |
| H21B | 0.6366 | −0.0673 | 0.8533 | 0.051* | |
| H21C | 0.5276 | −0.0625 | 0.7113 | 0.051* | |
| N1 | 0.79874 (12) | 0.18732 (10) | 0.71386 (18) | 0.0206 (4) | |
| H1 | 0.776 | 0.1667 | 0.7886 | 0.025* | |
| O1 | 0.71769 (11) | 0.27168 (9) | 0.45065 (15) | 0.0254 (3) | |
| P1 | 0.71741 (4) | 0.19123 (3) | 0.53744 (5) | 0.01919 (17) |
| C1 | 0.0195 (9) | 0.0215 (9) | 0.0192 (10) | 0.0013 (7) | 0.0074 (8) | −0.0021 (7) |
| C2 | 0.0216 (10) | 0.0272 (10) | 0.0265 (10) | −0.0034 (8) | 0.0078 (8) | 0.0019 (8) |
| C3 | 0.0194 (10) | 0.0337 (11) | 0.0295 (11) | −0.0023 (8) | 0.0024 (8) | −0.0006 (9) |
| C4 | 0.0238 (10) | 0.0275 (10) | 0.0227 (10) | 0.0055 (8) | 0.0022 (8) | 0.0010 (8) |
| C5 | 0.0272 (10) | 0.0225 (10) | 0.0244 (10) | 0.0022 (8) | 0.0085 (8) | 0.0032 (8) |
| C6 | 0.0201 (9) | 0.0229 (10) | 0.0233 (10) | −0.0007 (8) | 0.0060 (8) | 0.0000 (8) |
| C7 | 0.0185 (9) | 0.0301 (10) | 0.0221 (10) | −0.0039 (8) | 0.0062 (8) | 0.0042 (8) |
| C8 | 0.0194 (9) | 0.0270 (10) | 0.0203 (9) | −0.0050 (8) | 0.0093 (7) | 0.0004 (8) |
| C9 | 0.0204 (10) | 0.0307 (11) | 0.0256 (10) | −0.0017 (8) | 0.0102 (8) | 0.0004 (8) |
| C10 | 0.0240 (11) | 0.0325 (12) | 0.0458 (13) | −0.0015 (9) | 0.0177 (10) | −0.0032 (10) |
| C11 | 0.0390 (13) | 0.0396 (13) | 0.0462 (14) | −0.0108 (10) | 0.0282 (11) | −0.0169 (11) |
| C12 | 0.0442 (13) | 0.0490 (14) | 0.0256 (11) | −0.0133 (11) | 0.0164 (10) | −0.0079 (10) |
| C13 | 0.0327 (11) | 0.0356 (12) | 0.0211 (10) | −0.0059 (9) | 0.0094 (9) | 0.0003 (9) |
| C14 | 0.0206 (10) | 0.0307 (11) | 0.0202 (10) | −0.0018 (8) | 0.0070 (8) | −0.0044 (8) |
| C15 | 0.0276 (11) | 0.0306 (11) | 0.0296 (11) | 0.0007 (9) | 0.0097 (9) | 0.0033 (9) |
| C16 | 0.0239 (11) | 0.0370 (12) | 0.0372 (12) | 0.0061 (9) | 0.0043 (9) | 0.0032 (10) |
| C17 | 0.0210 (10) | 0.0375 (12) | 0.0354 (12) | −0.0020 (9) | 0.0086 (9) | −0.0041 (10) |
| C18 | 0.0224 (10) | 0.0323 (11) | 0.0305 (11) | −0.0058 (9) | 0.0106 (8) | −0.0067 (9) |
| C19 | 0.0231 (10) | 0.0285 (11) | 0.0222 (10) | −0.0022 (8) | 0.0064 (8) | −0.0047 (8) |
| C20 | 0.0239 (10) | 0.0356 (12) | 0.0278 (11) | −0.0026 (9) | 0.0091 (8) | 0.0006 (9) |
| C21 | 0.0308 (11) | 0.0370 (12) | 0.0338 (12) | −0.0036 (9) | 0.0086 (9) | 0.0053 (10) |
| N1 | 0.0180 (8) | 0.0269 (9) | 0.0180 (8) | −0.0029 (6) | 0.0069 (7) | 0.0036 (6) |
| O1 | 0.0255 (7) | 0.0291 (8) | 0.0218 (7) | 0.0018 (6) | 0.0075 (6) | 0.0047 (6) |
| P1 | 0.0162 (3) | 0.0251 (3) | 0.0166 (3) | −0.00091 (18) | 0.00544 (19) | 0.00211 (18) |
| C1—C6 | 1.386 (3) | C12—C13 | 1.378 (3) |
| C1—C2 | 1.393 (3) | C12—H12 | 0.95 |
| C1—C7 | 1.516 (3) | C13—H13 | 0.95 |
| C2—C3 | 1.386 (3) | C14—C19 | 1.404 (3) |
| C2—H2 | 0.95 | C14—C15 | 1.409 (3) |
| C3—C4 | 1.386 (3) | C14—P1 | 1.816 (2) |
| C3—H3 | 0.95 | C15—C16 | 1.382 (3) |
| C4—C5 | 1.380 (3) | C15—H15 | 0.95 |
| C4—H4 | 0.95 | C16—C17 | 1.381 (3) |
| C5—C6 | 1.391 (3) | C16—H16 | 0.95 |
| C5—H5 | 0.95 | C17—C18 | 1.378 (3) |
| C6—H6 | 0.95 | C17—H17 | 0.95 |
| C7—N1 | 1.465 (2) | C18—C19 | 1.402 (3) |
| C7—H7A | 0.99 | C18—H18 | 0.95 |
| C7—H7B | 0.99 | C19—C20 | 1.505 (3) |
| C8—C9 | 1.393 (3) | C20—C21 | 1.534 (3) |
| C8—C13 | 1.398 (3) | C20—H20A | 0.99 |
| C8—P1 | 1.813 (2) | C20—H20B | 0.99 |
| C9—C10 | 1.383 (3) | C21—H21A | 0.98 |
| C9—H9 | 0.95 | C21—H21B | 0.98 |
| C10—C11 | 1.392 (3) | C21—H21C | 0.98 |
| C10—H10 | 0.95 | N1—P1 | 1.6332 (16) |
| C11—C12 | 1.388 (4) | N1—H1 | 0.88 |
| C11—H11 | 0.95 | O1—P1 | 1.4910 (14) |
| C6—C1—C2 | 118.48 (18) | C8—C13—H13 | 120.1 |
| C6—C1—C7 | 122.93 (17) | C19—C14—C15 | 120.01 (18) |
| C2—C1—C7 | 118.59 (17) | C19—C14—P1 | 126.76 (16) |
| C3—C2—C1 | 120.79 (19) | C15—C14—P1 | 113.20 (15) |
| C3—C2—H2 | 119.6 | C16—C15—C14 | 121.0 (2) |
| C1—C2—H2 | 119.6 | C16—C15—H15 | 119.5 |
| C4—C3—C2 | 120.18 (19) | C14—C15—H15 | 119.5 |
| C4—C3—H3 | 119.9 | C17—C16—C15 | 119.0 (2) |
| C2—C3—H3 | 119.9 | C17—C16—H16 | 120.5 |
| C5—C4—C3 | 119.48 (18) | C15—C16—H16 | 120.5 |
| C5—C4—H4 | 120.3 | C18—C17—C16 | 120.71 (19) |
| C3—C4—H4 | 120.3 | C18—C17—H17 | 119.6 |
| C4—C5—C6 | 120.29 (19) | C16—C17—H17 | 119.6 |
| C4—C5—H5 | 119.9 | C17—C18—C19 | 121.8 (2) |
| C6—C5—H5 | 119.9 | C17—C18—H18 | 119.1 |
| C1—C6—C5 | 120.77 (18) | C19—C18—H18 | 119.1 |
| C1—C6—H6 | 119.6 | C18—C19—C14 | 117.48 (19) |
| C5—C6—H6 | 119.6 | C18—C19—C20 | 120.43 (19) |
| N1—C7—C1 | 112.92 (16) | C14—C19—C20 | 122.08 (18) |
| N1—C7—H7A | 109 | C19—C20—C21 | 116.47 (17) |
| C1—C7—H7A | 109 | C19—C20—H20A | 108.2 |
| N1—C7—H7B | 109 | C21—C20—H20A | 108.2 |
| C1—C7—H7B | 109 | C19—C20—H20B | 108.2 |
| H7A—C7—H7B | 107.8 | C21—C20—H20B | 108.2 |
| C9—C8—C13 | 119.37 (19) | H20A—C20—H20B | 107.3 |
| C9—C8—P1 | 122.39 (15) | C20—C21—H21A | 109.5 |
| C13—C8—P1 | 118.21 (16) | C20—C21—H21B | 109.5 |
| C10—C9—C8 | 120.60 (19) | H21A—C21—H21B | 109.5 |
| C10—C9—H9 | 119.7 | C20—C21—H21C | 109.5 |
| C8—C9—H9 | 119.7 | H21A—C21—H21C | 109.5 |
| C9—C10—C11 | 119.8 (2) | H21B—C21—H21C | 109.5 |
| C9—C10—H10 | 120.1 | C7—N1—P1 | 118.96 (13) |
| C11—C10—H10 | 120.1 | C7—N1—H1 | 120.5 |
| C12—C11—C10 | 119.7 (2) | P1—N1—H1 | 120.5 |
| C12—C11—H11 | 120.1 | O1—P1—N1 | 116.67 (8) |
| C10—C11—H11 | 120.1 | O1—P1—C8 | 109.12 (8) |
| C13—C12—C11 | 120.7 (2) | N1—P1—C8 | 105.70 (9) |
| C13—C12—H12 | 119.6 | O1—P1—C14 | 108.77 (9) |
| C11—C12—H12 | 119.6 | N1—P1—C14 | 106.44 (9) |
| C12—C13—C8 | 119.8 (2) | C8—P1—C14 | 110.01 (9) |
| C12—C13—H13 | 120.1 | ||
| C6—C1—C2—C3 | 0.8 (3) | C17—C18—C19—C20 | 178.74 (19) |
| C7—C1—C2—C3 | −179.37 (19) | C15—C14—C19—C18 | 0.1 (3) |
| C1—C2—C3—C4 | −0.2 (3) | P1—C14—C19—C18 | −177.67 (15) |
| C2—C3—C4—C5 | −0.5 (3) | C15—C14—C19—C20 | −178.96 (19) |
| C3—C4—C5—C6 | 0.6 (3) | P1—C14—C19—C20 | 3.2 (3) |
| C2—C1—C6—C5 | −0.7 (3) | C18—C19—C20—C21 | 5.3 (3) |
| C7—C1—C6—C5 | 179.48 (19) | C14—C19—C20—C21 | −175.67 (19) |
| C4—C5—C6—C1 | 0.0 (3) | C1—C7—N1—P1 | −158.63 (13) |
| C6—C1—C7—N1 | 5.2 (3) | C7—N1—P1—O1 | −44.63 (17) |
| C2—C1—C7—N1 | −174.62 (17) | C7—N1—P1—C8 | 76.83 (16) |
| C13—C8—C9—C10 | 0.1 (3) | C7—N1—P1—C14 | −166.21 (15) |
| P1—C8—C9—C10 | −177.86 (15) | C9—C8—P1—O1 | 137.49 (16) |
| C8—C9—C10—C11 | −0.2 (3) | C13—C8—P1—O1 | −40.47 (17) |
| C9—C10—C11—C12 | 0.4 (3) | C9—C8—P1—N1 | 11.27 (18) |
| C10—C11—C12—C13 | −0.5 (3) | C13—C8—P1—N1 | −166.69 (15) |
| C11—C12—C13—C8 | 0.4 (3) | C9—C8—P1—C14 | −103.26 (17) |
| C9—C8—C13—C12 | −0.2 (3) | C13—C8—P1—C14 | 78.79 (17) |
| P1—C8—C13—C12 | 177.84 (16) | C19—C14—P1—O1 | −176.35 (17) |
| C19—C14—C15—C16 | 0.5 (3) | C15—C14—P1—O1 | 5.72 (18) |
| P1—C14—C15—C16 | 178.53 (17) | C19—C14—P1—N1 | −49.9 (2) |
| C14—C15—C16—C17 | −0.8 (3) | C15—C14—P1—N1 | 132.20 (15) |
| C15—C16—C17—C18 | 0.6 (3) | C19—C14—P1—C8 | 64.2 (2) |
| C16—C17—C18—C19 | 0.0 (3) | C15—C14—P1—C8 | −113.75 (16) |
| C17—C18—C19—C14 | −0.4 (3) |
| Cg2 and Cg3 are the centroids of the C8–C13 and C14–C19 rings, respectively. |
| H··· | ||||
| N1—H1···O1i | 0.88 | 2.09 | 2.742 (2) | 131 |
| C18—H18··· | 0.95 | 2.98 | 3.756 (2) | 139 |
| C21—H21C··· | 0.98 | 2.83 | 3.636 (3) | 140 |
Hydrogen-bond geometry (Å, °)
Cg2 and Cg3 are the centroids of the C8–C13 and C14–C19 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.88 | 2.09 | 2.742 (2) | 131 |
| C18—H18⋯ | 0.95 | 2.98 | 3.756 (2) | 139 |
| C21—H21 | 0.98 | 2.83 | 3.636 (3) | 140 |
Symmetry codes: (i) ; (ii) .