Literature DB >> 22199852

(E)-1-{4-[Bis(4-bromo-phen-yl)meth-yl]piperazin-1-yl}-3-(4-bromo-phen-yl)prop-2-en-1-one.

Yan Zhong, Xiaoping Zhang, Bin Wu.   

Abstract

In the title mol-ecule, C(26)H(23)Br(3)N(2)O, the piperazine ring adopts a chair conformation and the C=C double bond has an E configuration. In the crystal, mol-ecules are linked through weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22199852      PMCID: PMC3239003          DOI: 10.1107/S1600536811048380

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pharmacological properties of cinnamic acid derivatives, see: Shi et al. (2005 ▶); Qian et al. (2010 ▶). For the synthesis of the title compound, see: Wu et al. (2008 ▶). For a related structure, see: Teng et al. (2011 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C26H23Br3N2O M = 619.19 Monoclinic, a = 9.956 (2) Å b = 11.624 (2) Å c = 21.310 (4) Å β = 101.45 (3)° V = 2417.1 (8) Å3 Z = 4 Mo Kα radiation μ = 5.03 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.433, T max = 0.633 4701 measured reflections 4432 independent reflections 2081 reflections with I > 2σ(I) R int = 0.098 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.082 S = 1.01 4432 reflections 289 parameters 2 restraints H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811048380/pv2478sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048380/pv2478Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811048380/pv2478Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H23Br3N2OF(000) = 1224
Mr = 619.19Dx = 1.702 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 9.956 (2) Åθ = 10–13°
b = 11.624 (2) ŵ = 5.03 mm1
c = 21.310 (4) ÅT = 293 K
β = 101.45 (3)°Block, pale-yellow
V = 2417.1 (8) Å30.20 × 0.10 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer2081 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.098
graphiteθmax = 25.4°, θmin = 2.0°
ω/2θ scansh = 0→12
Absorption correction: ψ scan (North et al., 1968)k = 0→14
Tmin = 0.433, Tmax = 0.633l = −25→25
4701 measured reflections3 standard reflections every 200 reflections
4432 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0185P)2] where P = (Fo2 + 2Fc2)/3
4432 reflections(Δ/σ)max = 0.001
289 parametersΔρmax = 0.35 e Å3
2 restraintsΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O0.4281 (4)0.8456 (3)0.49348 (19)0.0564 (13)
Br10.93912 (8)0.12182 (7)0.72681 (4)0.0763 (3)
N10.3393 (5)0.7165 (5)0.5513 (3)0.0582 (15)
C10.5229 (6)0.5927 (5)0.6057 (3)0.059 (2)
H1A0.58590.53280.59840.071*
H1B0.57670.65730.62570.071*
Br20.16720 (8)0.29610 (8)0.88918 (3)0.0834 (3)
N20.4370 (5)0.5493 (4)0.6490 (2)0.0443 (13)
C20.4386 (6)0.6302 (5)0.5429 (3)0.0562 (18)
H2A0.49840.66110.51620.067*
H2B0.39130.56410.52110.067*
Br3−0.05208 (8)1.44635 (7)0.58711 (4)0.0847 (3)
C30.2520 (6)0.6816 (5)0.5959 (3)0.0557 (19)
H3A0.19020.62100.57680.067*
H3B0.19750.74650.60480.067*
C40.3417 (6)0.6387 (5)0.6579 (3)0.0549 (18)
H4A0.39290.70320.67950.066*
H4B0.28290.60980.68560.066*
C50.5188 (6)0.5151 (5)0.7109 (3)0.0510 (18)
H5A0.56320.58430.73160.061*
C60.6277 (6)0.4288 (5)0.7081 (3)0.0457 (16)
C70.6099 (5)0.3340 (5)0.6655 (3)0.0483 (17)
H7A0.53090.33150.63370.058*
C80.7002 (7)0.2476 (6)0.6681 (3)0.0563 (19)
H8A0.68390.18760.63870.068*
C90.8187 (6)0.2489 (5)0.7156 (3)0.0473 (17)
C100.8421 (6)0.3419 (6)0.7559 (3)0.059 (2)
H10A0.92320.34600.78620.071*
C110.7479 (6)0.4292 (6)0.7522 (3)0.0563 (19)
H11A0.76650.49050.78060.068*
C120.4301 (6)0.4650 (5)0.7545 (3)0.0461 (16)
C130.4486 (6)0.4907 (6)0.8175 (3)0.062 (2)
H13A0.51430.54550.83400.075*
C140.3732 (6)0.4388 (6)0.8595 (3)0.062 (2)
H14A0.39080.45640.90290.075*
C150.2737 (7)0.3620 (6)0.8339 (3)0.0552 (19)
C160.2504 (6)0.3338 (5)0.7715 (3)0.0543 (18)
H16A0.18230.28100.75500.065*
C170.3289 (6)0.3840 (5)0.7315 (3)0.0494 (17)
H17A0.31350.36310.68860.059*
C180.3496 (7)0.8259 (6)0.5292 (3)0.0500 (17)
C190.2533 (6)0.9125 (5)0.5439 (3)0.0452 (17)
H19A0.17410.88930.55730.054*
C200.2785 (6)1.0231 (6)0.5384 (3)0.0491 (17)
H20A0.35741.04000.52310.059*
C210.2005 (6)1.1230 (6)0.5527 (3)0.0466 (16)
C220.2556 (6)1.2308 (6)0.5522 (3)0.0543 (18)
H22A0.34491.23900.54600.065*
C230.1802 (7)1.3288 (6)0.5610 (3)0.061 (2)
H23A0.21671.40200.55880.074*
C240.0504 (7)1.3141 (6)0.5729 (3)0.0522 (18)
C25−0.0090 (7)1.2091 (6)0.5737 (3)0.0583 (19)
H25A−0.09831.20110.58000.070*
C260.0699 (6)1.1140 (6)0.5648 (3)0.0586 (19)
H26A0.03291.04110.56710.070*
U11U22U33U12U13U23
O0.067 (3)0.065 (3)0.043 (3)−0.005 (2)0.024 (2)0.008 (2)
Br10.0670 (5)0.0714 (5)0.0907 (7)0.0136 (4)0.0157 (4)0.0143 (5)
N10.065 (4)0.053 (4)0.060 (4)0.011 (3)0.019 (3)0.011 (3)
C10.061 (5)0.067 (5)0.052 (5)0.016 (4)0.017 (4)0.003 (4)
Br20.0751 (6)0.1359 (8)0.0414 (5)0.0163 (6)0.0169 (4)0.0266 (5)
N20.051 (3)0.052 (3)0.028 (3)0.008 (3)0.004 (2)0.007 (3)
C20.063 (4)0.061 (4)0.048 (5)−0.004 (4)0.019 (4)0.007 (4)
Br30.0988 (7)0.0678 (5)0.0948 (7)0.0127 (5)0.0369 (5)−0.0054 (5)
C30.049 (4)0.060 (5)0.059 (5)0.003 (4)0.014 (4)0.021 (4)
C40.059 (4)0.051 (4)0.063 (5)0.008 (4)0.030 (4)0.016 (4)
C50.044 (4)0.059 (4)0.049 (5)0.001 (3)0.004 (3)−0.012 (4)
C60.054 (4)0.048 (4)0.035 (4)−0.012 (4)0.008 (3)0.002 (4)
C70.025 (3)0.065 (5)0.050 (4)−0.011 (3)−0.005 (3)−0.001 (4)
C80.063 (5)0.054 (5)0.052 (5)−0.005 (4)0.012 (4)−0.007 (4)
C90.044 (4)0.043 (4)0.055 (5)0.001 (3)0.011 (4)0.014 (4)
C100.035 (4)0.070 (5)0.073 (6)−0.010 (4)0.015 (4)0.007 (4)
C110.043 (4)0.070 (5)0.053 (5)0.008 (4)0.002 (3)−0.011 (4)
C120.048 (4)0.046 (4)0.042 (5)0.004 (3)0.003 (3)−0.007 (3)
C130.062 (5)0.075 (5)0.042 (5)0.017 (4)−0.009 (4)−0.008 (4)
C140.055 (5)0.096 (6)0.033 (5)0.017 (4)−0.001 (4)0.006 (4)
C150.065 (5)0.083 (5)0.022 (4)0.016 (4)0.019 (3)0.007 (4)
C160.057 (4)0.064 (5)0.042 (4)0.000 (4)0.010 (3)−0.009 (4)
C170.052 (4)0.071 (4)0.026 (4)−0.003 (4)0.011 (3)0.008 (4)
C180.060 (4)0.056 (4)0.034 (4)0.004 (4)0.009 (3)0.017 (4)
C190.040 (3)0.063 (5)0.032 (4)0.005 (4)0.005 (3)0.013 (3)
C200.050 (4)0.062 (5)0.033 (4)−0.013 (4)0.000 (3)0.016 (4)
C210.065 (4)0.056 (4)0.019 (4)0.000 (4)0.009 (3)−0.001 (3)
C220.049 (4)0.068 (5)0.039 (4)−0.013 (4)−0.007 (3)−0.006 (4)
C230.068 (5)0.064 (5)0.051 (5)0.009 (4)0.009 (4)0.005 (4)
C240.074 (5)0.050 (4)0.026 (4)0.005 (4)−0.007 (3)−0.011 (3)
C250.062 (5)0.069 (5)0.045 (4)0.002 (4)0.012 (3)−0.008 (4)
C260.053 (4)0.057 (5)0.071 (5)−0.003 (4)0.022 (4)0.015 (4)
O—C181.216 (6)C9—C101.372 (8)
Br1—C91.887 (6)C10—C111.373 (7)
N1—C181.368 (7)C10—H10A0.9300
N1—C21.444 (7)C11—H11A0.9300
N1—C31.466 (6)C12—C131.351 (7)
C1—N21.467 (6)C12—C171.394 (7)
C1—C21.498 (7)C13—C141.413 (6)
C1—H1A0.9700C13—H13A0.9300
C1—H1B0.9700C14—C151.365 (8)
Br2—C151.897 (6)C14—H14A0.9300
N2—C41.445 (6)C15—C161.344 (8)
N2—C51.460 (7)C16—C171.393 (7)
C2—H2A0.9700C16—H16A0.9300
C2—H2B0.9700C17—H17A0.9300
Br3—C241.902 (6)C18—C191.466 (7)
C3—C41.524 (7)C19—C201.320 (7)
C3—H3A0.9700C19—H19A0.9300
C3—H3B0.9700C20—C211.462 (8)
C4—H4A0.9700C20—H20A0.9300
C4—H4B0.9700C21—C221.368 (8)
C5—C61.488 (7)C21—C261.379 (7)
C5—C121.520 (7)C22—C231.396 (7)
C5—H5A0.9800C22—H22A0.9300
C6—C111.367 (7)C23—C241.377 (7)
C6—C71.417 (6)C23—H23A0.9300
C7—C81.341 (7)C24—C251.358 (7)
C7—H7A0.9300C25—C261.390 (7)
C8—C91.394 (8)C25—H25A0.9300
C8—H8A0.9300C26—H26A0.9300
C18—N1—C2120.2 (5)C11—C10—H10A119.4
C18—N1—C3125.1 (6)C6—C11—C10122.1 (7)
C2—N1—C3113.4 (5)C6—C11—H11A119.0
N2—C1—C2111.6 (5)C10—C11—H11A119.0
N2—C1—H1A109.3C13—C12—C17116.4 (6)
C2—C1—H1A109.3C13—C12—C5122.8 (6)
N2—C1—H1B109.3C17—C12—C5120.7 (6)
C2—C1—H1B109.3C12—C13—C14123.4 (7)
H1A—C1—H1B108.0C12—C13—H13A118.3
C4—N2—C5110.0 (5)C14—C13—H13A118.3
C4—N2—C1108.3 (5)C15—C14—C13117.4 (6)
C5—N2—C1111.8 (5)C15—C14—H14A121.3
N1—C2—C1111.5 (5)C13—C14—H14A121.3
N1—C2—H2A109.3C16—C15—C14121.6 (6)
C1—C2—H2A109.3C16—C15—Br2120.6 (6)
N1—C2—H2B109.3C14—C15—Br2117.8 (5)
C1—C2—H2B109.3C15—C16—C17119.7 (6)
H2A—C2—H2B108.0C15—C16—H16A120.2
N1—C3—C4109.3 (5)C17—C16—H16A120.2
N1—C3—H3A109.8C16—C17—C12121.4 (6)
C4—C3—H3A109.8C16—C17—H17A119.3
N1—C3—H3B109.8C12—C17—H17A119.3
C4—C3—H3B109.8O—C18—N1119.5 (6)
H3A—C3—H3B108.3O—C18—C19122.3 (6)
N2—C4—C3114.2 (5)N1—C18—C19117.9 (6)
N2—C4—H4A108.7C20—C19—C18120.4 (6)
C3—C4—H4A108.7C20—C19—H19A119.8
N2—C4—H4B108.7C18—C19—H19A119.8
C3—C4—H4B108.7C19—C20—C21129.6 (6)
H4A—C4—H4B107.6C19—C20—H20A115.2
N2—C5—C6115.4 (5)C21—C20—H20A115.2
N2—C5—C12111.6 (5)C22—C21—C26117.7 (6)
C6—C5—C12106.4 (5)C22—C21—C20119.7 (6)
N2—C5—H5A107.7C26—C21—C20122.5 (6)
C6—C5—H5A107.7C21—C22—C23121.3 (6)
C12—C5—H5A107.7C21—C22—H22A119.4
C11—C6—C7115.2 (6)C23—C22—H22A119.4
C11—C6—C5121.1 (6)C24—C23—C22118.2 (6)
C7—C6—C5123.4 (6)C24—C23—H23A120.9
C8—C7—C6123.9 (6)C22—C23—H23A120.9
C8—C7—H7A118.1C25—C24—C23122.7 (6)
C6—C7—H7A118.1C25—C24—Br3118.4 (6)
C7—C8—C9119.1 (6)C23—C24—Br3118.8 (5)
C7—C8—H8A120.4C24—C25—C26117.0 (6)
C9—C8—H8A120.4C24—C25—H25A121.5
C10—C9—C8118.5 (6)C26—C25—H25A121.5
C10—C9—Br1120.9 (5)C21—C26—C25123.0 (6)
C8—C9—Br1120.6 (5)C21—C26—H26A118.5
C9—C10—C11121.2 (6)C25—C26—H26A118.5
C9—C10—H10A119.4
C2—C1—N2—C4−57.4 (7)C6—C5—C12—C17−80.8 (7)
C2—C1—N2—C5−178.7 (5)C17—C12—C13—C141.1 (10)
C18—N1—C2—C1114.1 (6)C5—C12—C13—C14−175.5 (6)
C3—N1—C2—C1−53.7 (7)C12—C13—C14—C15−2.4 (10)
N2—C1—C2—N156.8 (7)C13—C14—C15—C161.9 (10)
C18—N1—C3—C4−116.3 (7)C13—C14—C15—Br2−177.7 (5)
C2—N1—C3—C450.7 (7)C14—C15—C16—C17−0.2 (10)
C5—N2—C4—C3179.4 (5)Br2—C15—C16—C17179.4 (5)
C1—N2—C4—C357.0 (7)C15—C16—C17—C12−1.2 (10)
N1—C3—C4—N2−53.7 (7)C13—C12—C17—C160.7 (9)
C4—N2—C5—C6−176.0 (5)C5—C12—C17—C16177.4 (6)
C1—N2—C5—C6−55.7 (7)C2—N1—C18—O11.9 (10)
C4—N2—C5—C1262.3 (6)C3—N1—C18—O178.2 (6)
C1—N2—C5—C12−177.3 (5)C2—N1—C18—C19−174.8 (5)
N2—C5—C6—C11147.7 (6)C3—N1—C18—C19−8.5 (10)
C12—C5—C6—C11−87.9 (7)O—C18—C19—C20−23.9 (10)
N2—C5—C6—C7−39.8 (8)N1—C18—C19—C20162.9 (6)
C12—C5—C6—C784.6 (7)C18—C19—C20—C21−177.4 (6)
C11—C6—C7—C82.1 (9)C19—C20—C21—C22170.6 (6)
C5—C6—C7—C8−170.8 (6)C19—C20—C21—C26−11.8 (10)
C6—C7—C8—C90.6 (10)C26—C21—C22—C23−2.6 (9)
C7—C8—C9—C10−3.4 (9)C20—C21—C22—C23175.2 (6)
C7—C8—C9—Br1173.4 (4)C21—C22—C23—C242.7 (9)
C8—C9—C10—C113.6 (9)C22—C23—C24—C25−2.9 (10)
Br1—C9—C10—C11−173.2 (5)C22—C23—C24—Br3178.4 (5)
C7—C6—C11—C10−1.9 (9)C23—C24—C25—C262.9 (10)
C5—C6—C11—C10171.2 (5)Br3—C24—C25—C26−178.4 (5)
C9—C10—C11—C6−0.9 (10)C22—C21—C26—C252.7 (10)
N2—C5—C12—C13−137.7 (6)C20—C21—C26—C25−175.0 (6)
C6—C5—C12—C1395.7 (7)C24—C25—C26—C21−2.8 (10)
N2—C5—C12—C1745.9 (8)
D—H···AD—HH···AD···AD—H···A
C20—H20A···Oi0.932.603.480 (7)159
C2—H2A···O0.972.282.710 (7)106
C20—H20A···O0.932.492.821 (8)101
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C20—H20A⋯Oi0.932.603.480 (7)159

Symmetry code: (i) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  (E)-1-{4-[Bis(4-meth-oxy-phen-yl)meth-yl]piperazin-1-yl}-3-(4-fluoro-phen-yl)prop-2-en-1-one.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-14
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