| Literature DB >> 22199840 |
K B Abdireymov, N S Mukhamedov, R Ya Okmanov, M J Ayimbetov, B Tashkhodjaev.
Abstract
The title compound, 0.759C(19)H(21)ClN(2)O(2)S·0.241C(19)H(21)ClN(2)O(2)S, was synthesized by aryl-sulfonyl-ation of 2-n-butyl-5-chloro-1H-benzimidazole in the presence of triethyl-amine. The crystal structure is composed of two mol-ecules, 2-n-butyl-6-chloro-1-(2,4-dimethylphenyl-sulfon-yl)-1H-benzimidazole and 1-(2,4-dimethylphenyl-sulfon-yl)-2-n-butyl-5-chloro-1H-benz-imidazole, in the refined ratio of 0.759 (4):0.241 (4) disordered at the same position in the unit cell. The mol-ecule has three essentially planar fragments viz. benzimidazole, dimethyl-benzene and n-butyl (r.m.s. deviations of 0.009, 0.024 and 0.003 Å, respectively). The angle between the benzimidazole and dimethyl-benzene fragments is 86.0 (1)°. In the crystal, pairs of inter-molecular C-H⋯π inter-actions form centrosymmetrical dimers, which are linked by weak inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 22199840 PMCID: PMC3238991 DOI: 10.1107/S1600536811047957
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 0.7590.241C19H21ClN2O2S·0.2410.241C19H21ClN2O2S | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point < 381(9) K |
| Cu | |
| Cell parameters from 13 reflections | |
| θ = 10–20° | |
| α = 71.29 (3)° | µ = 2.98 mm−1 |
| β = 78.38 (3)° | |
| γ = 76.75 (3)° | Prizmatic, colorless |
| 0.68 × 0.45 × 0.20 mm |
| Stoe Stadi-4 four-circle diffractometer | 2460 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 60.0°, θmin = 4.1° |
| Scan width (ω) = 1.56 – 1.80, scan ratio 2θ:ω = 1.00 I(Net) and sigma(I) calculated according to Blessing (1987) | |
| Absorption correction: ψ scan ( | |
| 2722 measured reflections | 3 standard reflections every 60 min |
| 2714 independent reflections | intensity decay: 10.4% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2714 reflections | Δρmax = 0.35 e Å−3 |
| 240 parameters | Δρmin = −0.45 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.026 (3) |
| Experimental. Empirical absorption correction using ψ Scan.
Reflections used Mu * R = 0.00 H K L, θ, χ, Imin/Imax:
-1 -2 4 45.0 82.7 0.4551H NMR (400 MHz, CDCl~3~):
1-(2,4-dimethylbenzenesulfonyl)-2- |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.25613 (12) | 0.65554 (11) | 0.19565 (9) | 0.0537 (4) | |
| O1 | 0.2520 (4) | 0.5625 (3) | 0.1267 (3) | 0.0660 (9) | |
| O2 | 0.1230 (4) | 0.7622 (3) | 0.2077 (3) | 0.0647 (9) | |
| N1 | 0.2783 (4) | 0.5558 (3) | 0.3424 (3) | 0.0511 (8) | |
| N3 | 0.3767 (4) | 0.3796 (4) | 0.4993 (3) | 0.0606 (10) | |
| C2 | 0.3863 (5) | 0.4310 (4) | 0.3785 (4) | 0.0552 (10) | |
| C3A | 0.2567 (5) | 0.4705 (4) | 0.5479 (4) | 0.0552 (10) | |
| C4 | 0.1997 (6) | 0.4606 (5) | 0.6731 (4) | 0.0688 (13) | |
| H4A | 0.2428 | 0.3874 | 0.7370 | 0.083* | |
| C5 | 0.0780 (6) | 0.5624 (5) | 0.6986 (4) | 0.0658 (12) | |
| H5A | 0.0377 | 0.5584 | 0.7815 | 0.079* | 0.759 (4) |
| C6 | 0.0142 (5) | 0.6701 (5) | 0.6052 (4) | 0.0604 (11) | |
| H6A | −0.0684 | 0.7372 | 0.6269 | 0.072* | 0.241 (4) |
| C7 | 0.0675 (5) | 0.6835 (5) | 0.4791 (4) | 0.0573 (11) | |
| H7A | 0.0226 | 0.7564 | 0.4158 | 0.069* | |
| C7A | 0.1909 (5) | 0.5817 (4) | 0.4545 (4) | 0.0498 (10) | |
| C8 | 0.4990 (5) | 0.3662 (5) | 0.2876 (4) | 0.0606 (11) | |
| H8A | 0.5704 | 0.4300 | 0.2385 | 0.073* | |
| H8B | 0.4397 | 0.3519 | 0.2306 | 0.073* | |
| C9 | 0.5963 (6) | 0.2267 (5) | 0.3510 (4) | 0.0640 (12) | |
| H9A | 0.6586 | 0.2409 | 0.4061 | 0.077* | |
| H9B | 0.5255 | 0.1631 | 0.4016 | 0.077* | |
| C10 | 0.7063 (7) | 0.1625 (5) | 0.2552 (5) | 0.0754 (14) | |
| H10A | 0.7774 | 0.2261 | 0.2052 | 0.090* | |
| H10B | 0.6439 | 0.1496 | 0.1997 | 0.090* | |
| C11 | 0.8036 (7) | 0.0226 (6) | 0.3163 (6) | 0.0918 (18) | |
| H11A | 0.8725 | −0.0141 | 0.2528 | 0.138* | |
| H11B | 0.7337 | −0.0417 | 0.3638 | 0.138* | |
| H11C | 0.8662 | 0.0349 | 0.3710 | 0.138* | |
| C12 | 0.4289 (5) | 0.7259 (4) | 0.1379 (4) | 0.0498 (10) | |
| C13 | 0.4696 (5) | 0.8270 (4) | 0.1800 (4) | 0.0553 (11) | |
| C14 | 0.6081 (6) | 0.8746 (4) | 0.1239 (4) | 0.0603 (11) | |
| H14A | 0.6356 | 0.9413 | 0.1512 | 0.072* | |
| C15 | 0.7100 (5) | 0.8296 (5) | 0.0291 (4) | 0.0615 (11) | |
| C16 | 0.6664 (6) | 0.7320 (5) | −0.0118 (4) | 0.0657 (12) | |
| H16A | 0.7317 | 0.6998 | −0.0757 | 0.079* | |
| C17 | 0.5288 (6) | 0.6823 (5) | 0.0405 (4) | 0.0609 (11) | |
| H17A | 0.5009 | 0.6178 | 0.0105 | 0.073* | |
| C18 | 0.3722 (6) | 0.8773 (5) | 0.2876 (5) | 0.0702 (13) | |
| H18A | 0.4075 | 0.9581 | 0.2906 | 0.105* | |
| H18B | 0.3850 | 0.8043 | 0.3646 | 0.105* | |
| H18C | 0.2623 | 0.9014 | 0.2761 | 0.105* | |
| C19 | 0.8634 (6) | 0.8809 (7) | −0.0233 (6) | 0.0881 (16) | |
| H19A | 0.9019 | 0.8631 | −0.1029 | 0.132* | |
| H19B | 0.9399 | 0.8329 | 0.0331 | 0.132* | |
| H19C | 0.8471 | 0.9796 | −0.0340 | 0.132* | |
| Cl1 | −0.1412 (2) | 0.79798 (18) | 0.64266 (16) | 0.0782 (7) | 0.759 (4) |
| Cl1' | 0.0475 (7) | 0.5668 (7) | 0.8540 (5) | 0.081 (2) | 0.241 (4) |
| S1 | 0.0575 (7) | 0.0540 (7) | 0.0473 (6) | −0.0039 (5) | −0.0118 (5) | −0.0129 (5) |
| O1 | 0.077 (2) | 0.073 (2) | 0.0594 (18) | −0.0196 (16) | −0.0128 (15) | −0.0283 (16) |
| O2 | 0.0621 (18) | 0.0621 (18) | 0.0554 (18) | 0.0096 (14) | −0.0143 (14) | −0.0076 (14) |
| N1 | 0.056 (2) | 0.0460 (18) | 0.0433 (18) | −0.0003 (15) | −0.0038 (15) | −0.0104 (15) |
| N3 | 0.068 (2) | 0.053 (2) | 0.054 (2) | 0.0043 (17) | −0.0096 (17) | −0.0153 (17) |
| C2 | 0.056 (2) | 0.049 (2) | 0.059 (3) | 0.0009 (19) | −0.0074 (19) | −0.020 (2) |
| C3A | 0.058 (2) | 0.050 (2) | 0.054 (2) | 0.0005 (19) | −0.0065 (19) | −0.0173 (19) |
| C4 | 0.082 (3) | 0.066 (3) | 0.049 (3) | 0.000 (2) | −0.008 (2) | −0.013 (2) |
| C5 | 0.073 (3) | 0.070 (3) | 0.049 (2) | −0.009 (2) | 0.002 (2) | −0.019 (2) |
| C6 | 0.054 (2) | 0.062 (3) | 0.063 (3) | −0.006 (2) | 0.001 (2) | −0.025 (2) |
| C7 | 0.053 (2) | 0.056 (2) | 0.056 (3) | 0.0005 (19) | −0.0031 (19) | −0.016 (2) |
| C7A | 0.051 (2) | 0.049 (2) | 0.046 (2) | −0.0048 (18) | −0.0043 (17) | −0.0128 (18) |
| C8 | 0.063 (3) | 0.058 (3) | 0.058 (3) | 0.003 (2) | −0.004 (2) | −0.024 (2) |
| C9 | 0.063 (3) | 0.060 (3) | 0.065 (3) | 0.006 (2) | −0.008 (2) | −0.025 (2) |
| C10 | 0.084 (3) | 0.058 (3) | 0.078 (3) | 0.011 (2) | −0.008 (3) | −0.028 (3) |
| C11 | 0.082 (4) | 0.075 (4) | 0.112 (5) | 0.023 (3) | −0.021 (3) | −0.041 (3) |
| C12 | 0.057 (2) | 0.045 (2) | 0.045 (2) | −0.0020 (18) | −0.0097 (18) | −0.0132 (17) |
| C13 | 0.067 (3) | 0.045 (2) | 0.053 (2) | 0.001 (2) | −0.015 (2) | −0.0169 (19) |
| C14 | 0.071 (3) | 0.049 (2) | 0.063 (3) | −0.011 (2) | −0.021 (2) | −0.011 (2) |
| C15 | 0.063 (3) | 0.062 (3) | 0.053 (2) | −0.008 (2) | −0.013 (2) | −0.006 (2) |
| C16 | 0.071 (3) | 0.068 (3) | 0.054 (3) | −0.013 (2) | 0.002 (2) | −0.016 (2) |
| C17 | 0.076 (3) | 0.057 (3) | 0.051 (2) | −0.010 (2) | −0.004 (2) | −0.021 (2) |
| C18 | 0.085 (3) | 0.065 (3) | 0.065 (3) | −0.004 (2) | −0.009 (2) | −0.033 (2) |
| C19 | 0.076 (4) | 0.096 (4) | 0.086 (4) | −0.026 (3) | −0.013 (3) | −0.010 (3) |
| Cl1 | 0.0714 (11) | 0.0803 (12) | 0.0733 (11) | 0.0080 (8) | 0.0057 (8) | −0.0333 (9) |
| Cl1' | 0.077 (4) | 0.100 (4) | 0.069 (3) | −0.018 (3) | 0.010 (3) | −0.039 (3) |
| S1—O2 | 1.419 (3) | C9—H9A | 0.9700 |
| S1—O1 | 1.427 (3) | C9—H9B | 0.9700 |
| S1—N1 | 1.679 (3) | C10—C11 | 1.517 (7) |
| S1—C12 | 1.739 (4) | C10—H10A | 0.9700 |
| N1—C2 | 1.401 (5) | C10—H10B | 0.9700 |
| N1—C7A | 1.420 (5) | C11—H11A | 0.9600 |
| N3—C2 | 1.298 (6) | C11—H11B | 0.9600 |
| N3—C3A | 1.387 (5) | C11—H11C | 0.9600 |
| C2—C8 | 1.488 (6) | C12—C17 | 1.394 (6) |
| C3A—C7A | 1.389 (6) | C12—C13 | 1.410 (6) |
| C3A—C4 | 1.392 (6) | C13—C14 | 1.366 (6) |
| C4—C5 | 1.366 (7) | C13—C18 | 1.508 (6) |
| C4—H4A | 0.9300 | C14—C15 | 1.383 (7) |
| C5—C6 | 1.365 (7) | C14—H14A | 0.9300 |
| C5—Cl1' | 1.750 (7) | C15—C16 | 1.382 (7) |
| C5—H5A | 0.9300 | C15—C19 | 1.493 (7) |
| C6—C7 | 1.390 (6) | C16—C17 | 1.362 (7) |
| C6—Cl1 | 1.747 (5) | C16—H16A | 0.9300 |
| C6—H6A | 0.9300 | C17—H17A | 0.9300 |
| C7—C7A | 1.371 (6) | C18—H18A | 0.9600 |
| C7—H7A | 0.9300 | C18—H18B | 0.9600 |
| C8—C9 | 1.522 (6) | C18—H18C | 0.9600 |
| C8—H8A | 0.9700 | C19—H19A | 0.9600 |
| C8—H8B | 0.9700 | C19—H19B | 0.9600 |
| C9—C10 | 1.515 (6) | C19—H19C | 0.9600 |
| O2—S1—O1 | 119.5 (2) | C8—C9—H9B | 109.4 |
| O2—S1—N1 | 105.51 (18) | H9A—C9—H9B | 108.0 |
| O1—S1—N1 | 106.36 (18) | C9—C10—C11 | 112.0 (5) |
| O2—S1—C12 | 110.7 (2) | C9—C10—H10A | 109.2 |
| O1—S1—C12 | 108.22 (19) | C11—C10—H10A | 109.2 |
| N1—S1—C12 | 105.50 (18) | C9—C10—H10B | 109.2 |
| C2—N1—C7A | 106.4 (3) | C11—C10—H10B | 109.2 |
| C2—N1—S1 | 126.9 (3) | H10A—C10—H10B | 107.9 |
| C7A—N1—S1 | 126.7 (3) | C10—C11—H11A | 109.5 |
| C2—N3—C3A | 105.6 (3) | C10—C11—H11B | 109.5 |
| N3—C2—N1 | 112.4 (4) | H11A—C11—H11B | 109.5 |
| N3—C2—C8 | 124.4 (4) | C10—C11—H11C | 109.5 |
| N1—C2—C8 | 123.2 (4) | H11A—C11—H11C | 109.5 |
| N3—C3A—C7A | 112.1 (4) | H11B—C11—H11C | 109.5 |
| N3—C3A—C4 | 128.0 (4) | C17—C12—C13 | 118.9 (4) |
| C7A—C3A—C4 | 119.9 (4) | C17—C12—S1 | 116.9 (3) |
| C5—C4—C3A | 117.5 (4) | C13—C12—S1 | 124.2 (3) |
| C5—C4—H4A | 121.3 | C14—C13—C12 | 117.5 (4) |
| C3A—C4—H4A | 121.3 | C14—C13—C18 | 119.6 (4) |
| C6—C5—C4 | 121.5 (4) | C12—C13—C18 | 122.8 (4) |
| C6—C5—Cl1' | 122.7 (4) | C13—C14—C15 | 124.2 (4) |
| C4—C5—Cl1' | 114.0 (4) | C13—C14—H14A | 117.9 |
| C6—C5—H5A | 119.2 | C15—C14—H14A | 117.9 |
| C4—C5—H5A | 119.2 | C16—C15—C14 | 117.3 (4) |
| C5—C6—C7 | 122.8 (4) | C16—C15—C19 | 121.5 (5) |
| C5—C6—Cl1 | 119.8 (4) | C14—C15—C19 | 121.2 (5) |
| C7—C6—Cl1 | 117.4 (4) | C17—C16—C15 | 120.8 (4) |
| C5—C6—H6A | 118.6 | C17—C16—H16A | 119.6 |
| C7—C6—H6A | 118.6 | C15—C16—H16A | 119.6 |
| C7A—C7—C6 | 115.2 (4) | C16—C17—C12 | 121.4 (4) |
| C7A—C7—H7A | 122.4 | C16—C17—H17A | 119.3 |
| C6—C7—H7A | 122.4 | C12—C17—H17A | 119.3 |
| C7—C7A—C3A | 123.0 (4) | C13—C18—H18A | 109.5 |
| C7—C7A—N1 | 133.5 (4) | C13—C18—H18B | 109.5 |
| C3A—C7A—N1 | 103.5 (3) | H18A—C18—H18B | 109.5 |
| C2—C8—C9 | 112.6 (4) | C13—C18—H18C | 109.5 |
| C2—C8—H8A | 109.1 | H18A—C18—H18C | 109.5 |
| C9—C8—H8A | 109.1 | H18B—C18—H18C | 109.5 |
| C2—C8—H8B | 109.1 | C15—C19—H19A | 109.5 |
| C9—C8—H8B | 109.1 | C15—C19—H19B | 109.5 |
| H8A—C8—H8B | 107.8 | H19A—C19—H19B | 109.5 |
| C10—C9—C8 | 111.0 (4) | C15—C19—H19C | 109.5 |
| C10—C9—H9A | 109.4 | H19A—C19—H19C | 109.5 |
| C8—C9—H9A | 109.4 | H19B—C19—H19C | 109.5 |
| C10—C9—H9B | 109.4 | ||
| O2—S1—N1—C2 | 174.6 (3) | C4—C3A—C7A—N1 | 180.0 (4) |
| O1—S1—N1—C2 | 46.7 (4) | C2—N1—C7A—C7 | −177.5 (5) |
| C12—S1—N1—C2 | −68.1 (4) | S1—N1—C7A—C7 | 2.5 (7) |
| O2—S1—N1—C7A | −5.4 (4) | C2—N1—C7A—C3A | 0.9 (4) |
| O1—S1—N1—C7A | −133.3 (3) | S1—N1—C7A—C3A | −179.1 (3) |
| C12—S1—N1—C7A | 111.9 (4) | N3—C2—C8—C9 | 3.6 (7) |
| C3A—N3—C2—N1 | 1.0 (5) | N1—C2—C8—C9 | −176.6 (4) |
| C3A—N3—C2—C8 | −179.2 (4) | C2—C8—C9—C10 | 178.5 (4) |
| C7A—N1—C2—N3 | −1.2 (5) | C8—C9—C10—C11 | −179.4 (5) |
| S1—N1—C2—N3 | 178.8 (3) | O2—S1—C12—C17 | −133.0 (3) |
| C7A—N1—C2—C8 | 179.0 (4) | O1—S1—C12—C17 | −0.2 (4) |
| S1—N1—C2—C8 | −1.0 (6) | N1—S1—C12—C17 | 113.3 (3) |
| C2—N3—C3A—C7A | −0.4 (5) | O2—S1—C12—C13 | 44.3 (4) |
| C2—N3—C3A—C4 | 179.3 (5) | O1—S1—C12—C13 | 177.1 (3) |
| N3—C3A—C4—C5 | −179.1 (5) | N1—S1—C12—C13 | −69.4 (4) |
| C7A—C3A—C4—C5 | 0.6 (7) | C17—C12—C13—C14 | −1.5 (6) |
| C3A—C4—C5—C6 | 0.0 (8) | S1—C12—C13—C14 | −178.7 (3) |
| C3A—C4—C5—Cl1' | −164.9 (4) | C17—C12—C13—C18 | −177.9 (4) |
| C4—C5—C6—C7 | 0.1 (8) | S1—C12—C13—C18 | 4.9 (6) |
| Cl1'—C5—C6—C7 | 163.8 (4) | C12—C13—C14—C15 | 0.0 (7) |
| C4—C5—C6—Cl1 | −179.9 (4) | C18—C13—C14—C15 | 176.5 (4) |
| Cl1'—C5—C6—Cl1 | −16.3 (7) | C13—C14—C15—C16 | 1.0 (7) |
| C5—C6—C7—C7A | −0.9 (7) | C13—C14—C15—C19 | −176.8 (4) |
| Cl1—C6—C7—C7A | 179.2 (3) | C14—C15—C16—C17 | −0.4 (7) |
| C6—C7—C7A—C3A | 1.5 (6) | C19—C15—C16—C17 | 177.4 (5) |
| C6—C7—C7A—N1 | 179.6 (4) | C15—C16—C17—C12 | −1.1 (7) |
| N3—C3A—C7A—C7 | 178.3 (4) | C13—C12—C17—C16 | 2.1 (7) |
| C4—C3A—C7A—C7 | −1.4 (7) | S1—C12—C17—C16 | 179.5 (4) |
| N3—C3A—C7A—N1 | −0.3 (5) |
| H··· | ||||
| C19—H19B···O2i | 0.96 | 2.62 | 3.554 (7) | 165 |
| C4—H4A···Cg3ii | 0.93 | 2.76 | 3.665 (8) | 163 |
Hydrogen-bond geometry (Å, °)
Cg3 is the centroid of the C12–C17 ring.
| H⋯ | ||||
|---|---|---|---|---|
| C19—H19 | 0.96 | 2.62 | 3.554 (7) | 165 |
| C4—H4 | 0.93 | 2.76 | 3.665 (8) | 163 |
Symmetry codes: (i) ; (ii) .