Literature DB >> 22199834

(4R*,4aS*,4bS*,5R*,10aR*)-4-Hy-droxy-4a,5-dimethyl-2-(propan-2-yl)-1,4,4a,4b,5,6,7,8,10,10a-deca-hydro-phenan-thren-1-one.

Ignez Caracelli, Julio Zukerman-Schpector, André T Lousada Machado, Timothy J Brocksom, M Lúcia Ferreira, Edward R T Tiekink.   

Abstract

In the title compound, C(19)H(28)O(2), the A ring adopts a chair conformation. Both the B and C rings adopt envelope conformations with the C atoms common to both rings and adjacent to the carbonyl and hydroxyl groups, respectively, lying 0.604 (3) and 0.634 (3) Å out of the mean planes defined by the remaining five C atoms of rings B and C, respectively (r.m.s. deviations = 0.0100 and 0.0157 Å, respectively). The formation of linear supra-molecular C(7) chains along the a axis mediated by hy-droxy-O-H⋯O(carbon-yl) hydrogen bonds is the most prominent feature of the crystal packing.

Entities:  

Year:  2011        PMID: 22199834      PMCID: PMC3238985          DOI: 10.1107/S1600536811048008

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological activity of some diterpene compounds, see: Guo et al. (2011 ▶); Slusarczyk et al. (2011 ▶). For the synthesis, see: Ferreira (2002 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C19H28O2 M = 288.41 Orthorhombic, a = 6.5507 (9) Å b = 11.733 (1) Å c = 22.338 (3) Å V = 1716.9 (4) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 290 K 0.15 × 0.12 × 0.09 mm

Data collection

Enraf–Nonius CAD-4 Mach 3 diffractometer 2272 measured reflections 1945 independent reflections 1077 reflections with I > 2σ(I) R int = 0.038 3 standard reflections every 30 min intensity decay: 2.0%

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.122 S = 1.02 1945 reflections 191 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.11 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: MolEN (Fair, 1990 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶), DIAMOND (Brandenburg, 2006 ▶) and MarvinSketch (Chemaxon, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048008/hb6477sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048008/hb6477Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H28O2F(000) = 632
Mr = 288.41Dx = 1.116 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 23 reflections
a = 6.5507 (9) Åθ = 9.1–16.5°
b = 11.733 (1) ŵ = 0.07 mm1
c = 22.338 (3) ÅT = 290 K
V = 1716.9 (4) Å3Irregular, colourless
Z = 40.15 × 0.12 × 0.09 mm
Enraf–Nonius CAD-4 Mach 3 diffractometerRint = 0.038
Radiation source: fine-focus sealed tubeθmax = 26.0°, θmin = 2.0°
graphiteh = −1→8
ω/–2θ scansk = −14→0
2272 measured reflectionsl = −27→0
1945 independent reflections3 standard reflections every 30 min
1077 reflections with I > 2σ(I) intensity decay: 2.0%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0557P)2 + 0.0441P] where P = (Fo2 + 2Fc2)/3
1945 reflections(Δ/σ)max < 0.001
191 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.11 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5700 (5)0.1474 (3)0.87731 (12)0.0536 (8)
H10.66260.19740.89960.064*
C20.6209 (4)0.1683 (2)0.80946 (13)0.0488 (8)
C30.4355 (4)0.1501 (3)0.76804 (12)0.0478 (7)
H30.33710.21130.77580.057*
C40.4904 (5)0.1535 (3)0.70352 (13)0.0527 (8)
H40.38670.17230.67690.063*
C50.6731 (5)0.1322 (3)0.68010 (13)0.0508 (7)
C60.8399 (5)0.1005 (3)0.72195 (15)0.0559 (8)
C70.7936 (4)0.0895 (2)0.78799 (14)0.0526 (8)
H70.91730.11210.80960.063*
C80.7588 (5)−0.0363 (3)0.80105 (14)0.0616 (9)
H8A0.6508−0.06530.77550.074*
H8B0.8823−0.07890.79250.074*
C90.7016 (6)−0.0514 (3)0.86456 (15)0.0656 (9)
H90.7258−0.12230.88180.079*
C100.6191 (5)0.0279 (3)0.89854 (14)0.0592 (8)
C110.5787 (7)0.0058 (4)0.96343 (16)0.0875 (13)
H11A0.67210.05090.98740.105*
H11B0.6046−0.07390.97200.105*
C120.3627 (8)0.0344 (4)0.98085 (18)0.1012 (15)
H12A0.2688−0.01650.96060.121*
H12B0.34540.02451.02370.121*
C130.3167 (8)0.1551 (3)0.96402 (16)0.0900 (12)
H13A0.40140.20530.98800.108*
H13B0.17530.17120.97380.108*
C140.3521 (6)0.1821 (3)0.89755 (16)0.0699 (10)
H140.25460.13680.87430.084*
C150.6977 (6)0.2914 (3)0.80117 (15)0.0750 (11)
H15A0.59330.34380.81350.113*
H15B0.73000.30410.75980.113*
H15C0.81770.30300.82510.113*
C160.7253 (5)0.1371 (3)0.61470 (13)0.0627 (9)
H160.81090.07080.60560.075*
C170.8497 (8)0.2431 (4)0.60174 (17)0.1106 (16)
H17A0.88630.24450.56010.166*
H17B0.97130.24250.62570.166*
H17C0.77040.30950.61110.166*
C180.5396 (6)0.1315 (4)0.57472 (15)0.0879 (13)
H18A0.58180.13270.53360.132*
H18B0.45300.19580.58260.132*
H18C0.46590.06240.58260.132*
C190.2980 (9)0.3082 (3)0.88848 (17)0.1022 (16)
H19A0.16050.32150.90150.153*
H19B0.31000.32720.84680.153*
H19C0.38980.35470.91140.153*
O11.0090 (3)0.0749 (2)0.70292 (10)0.0824 (8)
O20.3390 (3)0.04403 (17)0.78121 (9)0.0563 (6)
H2o0.23900.03590.75950.085*
U11U22U33U12U13U23
C10.0577 (17)0.0556 (18)0.0474 (17)−0.0035 (17)−0.0097 (15)−0.0039 (15)
C20.0480 (18)0.0450 (17)0.0533 (17)−0.0047 (15)−0.0104 (15)0.0007 (13)
C30.0434 (16)0.0470 (17)0.0529 (17)0.0061 (15)−0.0055 (13)0.0023 (14)
C40.0456 (16)0.0577 (19)0.0546 (18)0.0020 (16)−0.0140 (15)0.0068 (15)
C50.0432 (16)0.0584 (19)0.0509 (16)−0.0044 (16)−0.0060 (15)0.0036 (15)
C60.0357 (15)0.068 (2)0.064 (2)−0.0068 (16)−0.0025 (16)0.0015 (16)
C70.0381 (16)0.0631 (19)0.0566 (19)−0.0061 (15)−0.0127 (15)0.0056 (16)
C80.0565 (18)0.060 (2)0.068 (2)0.0132 (17)−0.0010 (17)0.0056 (17)
C90.069 (2)0.057 (2)0.071 (2)0.0115 (19)−0.0020 (18)0.0172 (17)
C100.0614 (19)0.062 (2)0.0543 (19)0.0002 (18)−0.0080 (17)0.0110 (17)
C110.112 (3)0.089 (3)0.062 (2)−0.001 (3)0.001 (2)0.012 (2)
C120.127 (4)0.109 (3)0.068 (2)−0.018 (3)0.028 (3)0.005 (2)
C130.094 (3)0.108 (3)0.068 (2)0.009 (3)0.014 (2)−0.017 (2)
C140.072 (2)0.074 (2)0.064 (2)0.007 (2)0.002 (2)−0.0152 (17)
C150.092 (3)0.054 (2)0.079 (2)−0.018 (2)−0.014 (2)0.0031 (17)
C160.0524 (18)0.082 (2)0.0536 (19)−0.0020 (19)−0.0015 (16)0.0041 (17)
C170.129 (4)0.126 (4)0.077 (3)−0.042 (4)0.018 (3)0.021 (3)
C180.077 (2)0.130 (3)0.057 (2)0.019 (3)−0.017 (2)−0.009 (2)
C190.129 (4)0.091 (3)0.087 (3)0.044 (3)0.007 (3)−0.018 (2)
O10.0360 (11)0.143 (2)0.0685 (15)0.0035 (15)0.0004 (12)0.0002 (15)
O20.0438 (11)0.0629 (13)0.0623 (13)−0.0109 (12)−0.0077 (11)−0.0014 (11)
C1—C101.514 (4)C11—H11B0.9700
C1—C141.552 (5)C12—C131.495 (6)
C1—C21.571 (4)C12—H12A0.9700
C1—H10.9800C12—H12B0.9700
C2—C71.538 (4)C13—C141.536 (5)
C2—C151.541 (4)C13—H13A0.9700
C2—C31.542 (4)C13—H13B0.9700
C3—O21.427 (3)C14—C191.535 (5)
C3—C41.486 (4)C14—H140.9800
C3—H30.9800C15—H15A0.9600
C4—C51.330 (4)C15—H15B0.9600
C4—H40.9300C15—H15C0.9600
C5—C61.485 (4)C16—C181.511 (5)
C5—C161.501 (4)C16—C171.515 (5)
C6—O11.224 (4)C16—H160.9800
C6—C71.512 (5)C17—H17A0.9600
C7—C81.522 (4)C17—H17B0.9600
C7—H70.9800C17—H17C0.9600
C8—C91.478 (4)C18—H18A0.9600
C8—H8A0.9700C18—H18B0.9600
C8—H8B0.9700C18—H18C0.9600
C9—C101.317 (4)C19—H19A0.9600
C9—H90.9300C19—H19B0.9600
C10—C111.496 (5)C19—H19C0.9600
C11—C121.505 (6)O2—H2o0.8200
C11—H11A0.9700
C10—C1—C14110.3 (3)H11A—C11—H11B107.9
C10—C1—C2113.7 (2)C13—C12—C11109.6 (4)
C14—C1—C2115.8 (3)C13—C12—H12A109.7
C10—C1—H1105.3C11—C12—H12A109.7
C14—C1—H1105.3C13—C12—H12B109.7
C2—C1—H1105.3C11—C12—H12B109.7
C7—C2—C15106.6 (3)H12A—C12—H12B108.2
C7—C2—C3108.0 (2)C12—C13—C14114.1 (3)
C15—C2—C3108.3 (2)C12—C13—H13A108.7
C7—C2—C1111.3 (2)C14—C13—H13A108.7
C15—C2—C1109.4 (2)C12—C13—H13B108.7
C3—C2—C1113.0 (2)C14—C13—H13B108.7
O2—C3—C4109.3 (2)H13A—C13—H13B107.6
O2—C3—C2110.2 (2)C19—C14—C13106.9 (3)
C4—C3—C2112.8 (2)C19—C14—C1115.2 (4)
O2—C3—H3108.1C13—C14—C1111.5 (3)
C4—C3—H3108.1C19—C14—H14107.6
C2—C3—H3108.1C13—C14—H14107.6
C5—C4—C3126.5 (3)C1—C14—H14107.6
C5—C4—H4116.8C2—C15—H15A109.5
C3—C4—H4116.8C2—C15—H15B109.5
C4—C5—C6117.5 (3)H15A—C15—H15B109.5
C4—C5—C16125.5 (3)C2—C15—H15C109.5
C6—C5—C16117.0 (3)H15A—C15—H15C109.5
O1—C6—C5120.6 (3)H15B—C15—H15C109.5
O1—C6—C7120.0 (3)C5—C16—C18113.0 (3)
C5—C6—C7119.2 (3)C5—C16—C17109.8 (3)
C6—C7—C8107.5 (3)C18—C16—C17110.9 (3)
C6—C7—C2113.6 (2)C5—C16—H16107.6
C8—C7—C2114.4 (3)C18—C16—H16107.6
C6—C7—H7107.0C17—C16—H16107.6
C8—C7—H7107.0C16—C17—H17A109.5
C2—C7—H7107.0C16—C17—H17B109.5
C9—C8—C7109.8 (3)H17A—C17—H17B109.5
C9—C8—H8A109.7C16—C17—H17C109.5
C7—C8—H8A109.7H17A—C17—H17C109.5
C9—C8—H8B109.7H17B—C17—H17C109.5
C7—C8—H8B109.7C16—C18—H18A109.5
H8A—C8—H8B108.2C16—C18—H18B109.5
C10—C9—C8124.9 (3)H18A—C18—H18B109.5
C10—C9—H9117.6C16—C18—H18C109.5
C8—C9—H9117.6H18A—C18—H18C109.5
C9—C10—C11120.5 (3)H18B—C18—H18C109.5
C9—C10—C1124.1 (3)C14—C19—H19A109.5
C11—C10—C1115.2 (3)C14—C19—H19B109.5
C10—C11—C12112.2 (4)H19A—C19—H19B109.5
C10—C11—H11A109.2C14—C19—H19C109.5
C12—C11—H11A109.2H19A—C19—H19C109.5
C10—C11—H11B109.2H19B—C19—H19C109.5
C12—C11—H11B109.2C3—O2—H2o109.5
C10—C1—C2—C7−26.9 (3)C15—C2—C7—C8171.6 (3)
C14—C1—C2—C7−156.1 (3)C3—C2—C7—C8−72.2 (3)
C10—C1—C2—C15−144.5 (3)C1—C2—C7—C852.4 (3)
C14—C1—C2—C1586.3 (4)C6—C7—C8—C9−176.9 (3)
C10—C1—C2—C394.8 (3)C2—C7—C8—C9−49.8 (4)
C14—C1—C2—C3−34.5 (4)C7—C8—C9—C1023.6 (5)
C7—C2—C3—O274.3 (3)C8—C9—C10—C11−176.3 (3)
C15—C2—C3—O2−170.6 (3)C8—C9—C10—C10.0 (6)
C1—C2—C3—O2−49.2 (3)C14—C1—C10—C9133.7 (4)
C7—C2—C3—C4−48.2 (3)C2—C1—C10—C91.7 (5)
C15—C2—C3—C467.0 (3)C14—C1—C10—C11−49.8 (4)
C1—C2—C3—C4−171.7 (3)C2—C1—C10—C11178.2 (3)
O2—C3—C4—C5−99.1 (4)C9—C10—C11—C12−128.9 (4)
C2—C3—C4—C523.9 (4)C1—C10—C11—C1254.5 (5)
C3—C4—C5—C60.8 (5)C10—C11—C12—C13−55.1 (5)
C3—C4—C5—C16−179.5 (3)C11—C12—C13—C1455.9 (5)
C4—C5—C6—O1176.7 (3)C12—C13—C14—C19−179.9 (4)
C16—C5—C6—O1−3.1 (5)C12—C13—C14—C1−53.1 (5)
C4—C5—C6—C72.3 (4)C10—C1—C14—C19169.7 (3)
C16—C5—C6—C7−177.4 (3)C2—C1—C14—C19−59.4 (4)
O1—C6—C7—C8−77.0 (4)C10—C1—C14—C1347.6 (4)
C5—C6—C7—C897.4 (3)C2—C1—C14—C13178.5 (3)
O1—C6—C7—C2155.4 (3)C4—C5—C16—C18−18.6 (5)
C5—C6—C7—C2−30.2 (4)C6—C5—C16—C18161.2 (3)
C15—C2—C7—C6−64.5 (3)C4—C5—C16—C17105.8 (4)
C3—C2—C7—C651.7 (3)C6—C5—C16—C17−74.5 (4)
C1—C2—C7—C6176.3 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2o···O1i0.822.022.804 (3)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2o⋯O1i0.822.022.804 (3)160

Symmetry code: (i) .

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