| Literature DB >> 22199831 |
Kazuma Gotoh1, Yuki Tahara, Hiroyuki Ishida.
Abstract
In the crystal structure of the title compound, C(4)H(10)NO(+)·C(6)HCl(2)O(4) (-)·CH(4)O, the components are held together by bifurcated O-H⋯(O,O), O-H⋯(O,Cl) and N-H⋯(O,O) hydrogen bonds into a centrosymmetric 2+2+2 aggregate. The aggregates are further connected by another bifurcated N-H⋯(O, O) hydrogen bond, forming a double-tape structure along the b axis. A weak C-H⋯O inter-action is observed between the tapes.Entities:
Year: 2011 PMID: 22199831 PMCID: PMC3238982 DOI: 10.1107/S1600536811047891
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H10NO+·C6HCl2O4−·CH4O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 16546 reflections | |
| θ = 3.6–30.1° | |
| µ = 0.50 mm−1 | |
| α = 107.8089 (7)° | |
| β = 107.5510 (7)° | Block, brown |
| γ = 110.2398 (7)° | 0.45 × 0.41 × 0.30 mm |
| Rigaku R-AXIS RAPID II diffractometer | 3636 reflections with |
| Detector resolution: 10.00 pixels mm-1 | |
| ω scans | θmax = 30.0° |
| Absorption correction: numerical ( | |
| 17817 measured reflections | |
| 3928 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3928 reflections | (Δ/σ)max = 0.001 |
| 197 parameters | Δρmax = 0.51 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.01275 (3) | 0.30381 (3) | 0.86968 (3) | 0.02809 (7) | |
| Cl2 | 0.20309 (3) | 0.06793 (3) | 0.53010 (3) | 0.02191 (7) | |
| O1 | 0.71379 (10) | 0.00021 (10) | 0.82390 (9) | 0.02629 (15) | |
| O2 | 0.84595 (9) | 0.45763 (9) | 0.70404 (9) | 0.02291 (14) | |
| O3 | 0.50528 (8) | 0.35907 (8) | 0.55923 (8) | 0.01801 (13) | |
| O4 | 0.37147 (9) | −0.10742 (9) | 0.67309 (9) | 0.02464 (15) | |
| O5 | 0.58600 (10) | 0.31839 (10) | −0.00604 (8) | 0.02641 (15) | |
| O6 | 0.80802 (9) | 0.70163 (9) | 0.66544 (10) | 0.02655 (16) | |
| N1 | 0.52494 (12) | 0.35047 (11) | 0.26136 (10) | 0.02167 (16) | |
| C1 | 0.67022 (12) | 0.08381 (11) | 0.76387 (10) | 0.01785 (16) | |
| C2 | 0.79228 (11) | 0.23463 (11) | 0.77003 (11) | 0.01801 (16) | |
| C3 | 0.73479 (11) | 0.32094 (10) | 0.70050 (10) | 0.01635 (15) | |
| C4 | 0.54246 (11) | 0.26734 (10) | 0.61815 (9) | 0.01450 (15) | |
| C5 | 0.42266 (11) | 0.12427 (11) | 0.61394 (10) | 0.01582 (15) | |
| C6 | 0.47242 (11) | 0.02420 (11) | 0.67825 (10) | 0.01687 (16) | |
| C7 | 0.70652 (13) | 0.42900 (12) | 0.27855 (11) | 0.02421 (18) | |
| H7A | 0.7887 | 0.4300 | 0.3706 | 0.029* | |
| H7B | 0.7451 | 0.5482 | 0.2962 | 0.029* | |
| C8 | 0.70673 (13) | 0.32531 (13) | 0.12851 (12) | 0.02324 (18) | |
| H8A | 0.8263 | 0.3774 | 0.1376 | 0.028* | |
| H8B | 0.6745 | 0.2081 | 0.1150 | 0.028* | |
| C9 | 0.41236 (13) | 0.23401 (14) | −0.02607 (12) | 0.0271 (2) | |
| H9A | 0.3830 | 0.1173 | −0.0391 | 0.033* | |
| H9B | 0.3285 | 0.2242 | −0.1231 | 0.033* | |
| C10 | 0.39445 (13) | 0.33079 (14) | 0.11517 (12) | 0.02451 (19) | |
| H10A | 0.4149 | 0.4445 | 0.1240 | 0.029* | |
| H10B | 0.2742 | 0.2678 | 0.1012 | 0.029* | |
| C11 | 0.98148 (13) | 0.84290 (14) | 0.75821 (14) | 0.0311 (2) | |
| H11A | 1.0434 | 0.8324 | 0.8508 | 0.047* | |
| H11B | 0.9754 | 0.9493 | 0.7933 | 0.047* | |
| H11C | 1.0448 | 0.8441 | 0.6943 | 0.047* | |
| H1A | 0.520 (2) | 0.414 (2) | 0.3435 (19) | 0.036 (4)* | |
| H1B | 0.4968 (19) | 0.252 (2) | 0.2566 (17) | 0.032 (4)* | |
| H2 | 0.801 (2) | 0.512 (2) | 0.675 (2) | 0.052 (5)* | |
| H6 | 0.750 (2) | 0.718 (2) | 0.609 (2) | 0.041 (4)* |
| Cl1 | 0.01597 (11) | 0.02532 (12) | 0.03726 (14) | 0.00939 (9) | 0.00314 (9) | 0.01727 (10) |
| Cl2 | 0.01479 (10) | 0.02700 (12) | 0.02709 (12) | 0.01005 (8) | 0.00953 (8) | 0.01609 (9) |
| O1 | 0.0255 (3) | 0.0270 (3) | 0.0347 (4) | 0.0155 (3) | 0.0119 (3) | 0.0222 (3) |
| O2 | 0.0153 (3) | 0.0180 (3) | 0.0339 (4) | 0.0068 (2) | 0.0065 (3) | 0.0162 (3) |
| O3 | 0.0178 (3) | 0.0170 (3) | 0.0206 (3) | 0.0095 (2) | 0.0066 (2) | 0.0109 (2) |
| O4 | 0.0229 (3) | 0.0235 (3) | 0.0338 (4) | 0.0104 (3) | 0.0144 (3) | 0.0198 (3) |
| O5 | 0.0241 (3) | 0.0382 (4) | 0.0223 (3) | 0.0151 (3) | 0.0135 (3) | 0.0172 (3) |
| O6 | 0.0189 (3) | 0.0227 (3) | 0.0357 (4) | 0.0082 (3) | 0.0056 (3) | 0.0194 (3) |
| N1 | 0.0300 (4) | 0.0218 (4) | 0.0196 (4) | 0.0145 (3) | 0.0139 (3) | 0.0120 (3) |
| C1 | 0.0194 (4) | 0.0179 (4) | 0.0189 (4) | 0.0104 (3) | 0.0084 (3) | 0.0103 (3) |
| C2 | 0.0146 (3) | 0.0170 (4) | 0.0213 (4) | 0.0081 (3) | 0.0051 (3) | 0.0098 (3) |
| C3 | 0.0149 (3) | 0.0146 (3) | 0.0176 (4) | 0.0069 (3) | 0.0054 (3) | 0.0073 (3) |
| C4 | 0.0151 (3) | 0.0144 (3) | 0.0138 (3) | 0.0080 (3) | 0.0058 (3) | 0.0061 (3) |
| C5 | 0.0136 (3) | 0.0175 (4) | 0.0174 (4) | 0.0079 (3) | 0.0068 (3) | 0.0091 (3) |
| C6 | 0.0189 (4) | 0.0177 (4) | 0.0178 (4) | 0.0099 (3) | 0.0098 (3) | 0.0097 (3) |
| C7 | 0.0239 (4) | 0.0213 (4) | 0.0209 (4) | 0.0078 (3) | 0.0067 (3) | 0.0091 (3) |
| C8 | 0.0207 (4) | 0.0261 (4) | 0.0258 (4) | 0.0119 (3) | 0.0115 (4) | 0.0137 (4) |
| C9 | 0.0212 (4) | 0.0362 (5) | 0.0194 (4) | 0.0123 (4) | 0.0092 (4) | 0.0096 (4) |
| C10 | 0.0269 (4) | 0.0327 (5) | 0.0238 (4) | 0.0191 (4) | 0.0145 (4) | 0.0159 (4) |
| C11 | 0.0194 (4) | 0.0250 (5) | 0.0430 (6) | 0.0080 (4) | 0.0068 (4) | 0.0192 (4) |
| Cl1—C2 | 1.7168 (9) | C2—C3 | 1.3536 (11) |
| Cl2—C5 | 1.7246 (8) | C3—C4 | 1.5069 (11) |
| O1—C1 | 1.2221 (11) | C4—C5 | 1.3874 (11) |
| O2—C3 | 1.3148 (10) | C5—C6 | 1.4107 (11) |
| O2—H2 | 0.825 (19) | C7—C8 | 1.5161 (13) |
| O3—C4 | 1.2630 (10) | C7—H7A | 0.9900 |
| O4—C6 | 1.2349 (11) | C7—H7B | 0.9900 |
| O5—C9 | 1.4211 (12) | C8—H8A | 0.9900 |
| O5—C8 | 1.4219 (12) | C8—H8B | 0.9900 |
| O6—C11 | 1.4260 (12) | C9—C10 | 1.5148 (13) |
| O6—H6 | 0.740 (17) | C9—H9A | 0.9900 |
| N1—C10 | 1.4870 (12) | C9—H9B | 0.9900 |
| N1—C7 | 1.4904 (13) | C10—H10A | 0.9900 |
| N1—H1A | 0.876 (16) | C10—H10B | 0.9900 |
| N1—H1B | 0.853 (16) | C11—H11A | 0.9800 |
| C1—C2 | 1.4373 (12) | C11—H11B | 0.9800 |
| C1—C6 | 1.5413 (12) | C11—H11C | 0.9800 |
| C3—O2—H2 | 113.5 (13) | C8—C7—H7A | 110.0 |
| C9—O5—C8 | 109.92 (7) | N1—C7—H7B | 110.0 |
| C11—O6—H6 | 111.7 (13) | C8—C7—H7B | 110.0 |
| C10—N1—C7 | 111.68 (7) | H7A—C7—H7B | 108.4 |
| C10—N1—H1A | 109.0 (10) | O5—C8—C7 | 110.97 (8) |
| C7—N1—H1A | 109.8 (10) | O5—C8—H8A | 109.4 |
| C10—N1—H1B | 108.2 (10) | C7—C8—H8A | 109.4 |
| C7—N1—H1B | 109.5 (10) | O5—C8—H8B | 109.4 |
| H1A—N1—H1B | 108.6 (14) | C7—C8—H8B | 109.4 |
| O1—C1—C2 | 123.92 (8) | H8A—C8—H8B | 108.0 |
| O1—C1—C6 | 117.69 (8) | O5—C9—C10 | 110.93 (8) |
| C2—C1—C6 | 118.39 (7) | O5—C9—H9A | 109.5 |
| C3—C2—C1 | 120.81 (8) | C10—C9—H9A | 109.5 |
| C3—C2—Cl1 | 120.88 (7) | O5—C9—H9B | 109.5 |
| C1—C2—Cl1 | 118.31 (6) | C10—C9—H9B | 109.5 |
| O2—C3—C2 | 120.97 (8) | H9A—C9—H9B | 108.0 |
| O2—C3—C4 | 117.02 (7) | N1—C10—C9 | 109.27 (8) |
| C2—C3—C4 | 122.00 (8) | N1—C10—H10A | 109.8 |
| O3—C4—C5 | 125.78 (8) | C9—C10—H10A | 109.8 |
| O3—C4—C3 | 116.12 (7) | N1—C10—H10B | 109.8 |
| C5—C4—C3 | 118.10 (7) | C9—C10—H10B | 109.8 |
| C4—C5—C6 | 123.01 (8) | H10A—C10—H10B | 108.3 |
| C4—C5—Cl2 | 118.77 (6) | O6—C11—H11A | 109.5 |
| C6—C5—Cl2 | 118.20 (6) | O6—C11—H11B | 109.5 |
| O4—C6—C5 | 125.85 (8) | H11A—C11—H11B | 109.5 |
| O4—C6—C1 | 116.53 (8) | O6—C11—H11C | 109.5 |
| C5—C6—C1 | 117.61 (7) | H11A—C11—H11C | 109.5 |
| N1—C7—C8 | 108.60 (8) | H11B—C11—H11C | 109.5 |
| N1—C7—H7A | 110.0 | ||
| O1—C1—C2—C3 | 179.84 (9) | C3—C4—C5—Cl2 | 176.39 (6) |
| C6—C1—C2—C3 | −0.87 (13) | C4—C5—C6—O4 | −177.30 (9) |
| O1—C1—C2—Cl1 | −0.89 (13) | Cl2—C5—C6—O4 | 4.08 (13) |
| C6—C1—C2—Cl1 | 178.40 (6) | C4—C5—C6—C1 | 3.11 (12) |
| C1—C2—C3—O2 | −179.07 (8) | Cl2—C5—C6—C1 | −175.50 (6) |
| Cl1—C2—C3—O2 | 1.68 (13) | O1—C1—C6—O4 | −1.84 (12) |
| C1—C2—C3—C4 | 1.85 (13) | C2—C1—C6—O4 | 178.82 (8) |
| Cl1—C2—C3—C4 | −177.40 (6) | O1—C1—C6—C5 | 177.79 (8) |
| O2—C3—C4—O3 | 0.18 (11) | C2—C1—C6—C5 | −1.55 (12) |
| C2—C3—C4—O3 | 179.29 (8) | C10—N1—C7—C8 | −53.98 (10) |
| O2—C3—C4—C5 | −179.49 (8) | C9—O5—C8—C7 | −62.82 (10) |
| C2—C3—C4—C5 | −0.38 (12) | N1—C7—C8—O5 | 58.10 (10) |
| O3—C4—C5—C6 | 178.14 (8) | C8—O5—C9—C10 | 62.10 (11) |
| C3—C4—C5—C6 | −2.22 (12) | C7—N1—C10—C9 | 53.70 (11) |
| O3—C4—C5—Cl2 | −3.25 (12) | O5—C9—C10—N1 | −57.15 (11) |
| H··· | ||||
| N1—H1A···O3 | 0.878 (18) | 2.391 (18) | 3.0069 (12) | 127.5 (16) |
| N1—H1A···O3i | 0.878 (18) | 2.180 (19) | 2.9255 (13) | 142.5 (16) |
| N1—H1B···O1ii | 0.852 (19) | 2.170 (19) | 2.9207 (14) | 146.9 (17) |
| N1—H1B···O4ii | 0.852 (19) | 2.233 (19) | 2.9277 (14) | 138.7 (16) |
| O2—H2···O3 | 0.82 (2) | 2.26 (2) | 2.6605 (12) | 110.6 (16) |
| O2—H2···O6 | 0.82 (2) | 1.79 (2) | 2.5564 (13) | 153.4 (19) |
| O6—H6···Cl2i | 0.742 (19) | 2.761 (19) | 3.3342 (9) | 136.0 (18) |
| O6—H6···O3i | 0.742 (19) | 2.119 (19) | 2.7812 (12) | 149 (2) |
| C8—H8A···O2iii | 0.99 | 2.51 | 3.4115 (15) | 152 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.878 (18) | 2.391 (18) | 3.0069 (12) | 127.5 (16) |
| N1—H1 | 0.878 (18) | 2.180 (19) | 2.9255 (13) | 142.5 (16) |
| N1—H1 | 0.852 (19) | 2.170 (19) | 2.9207 (14) | 146.9 (17) |
| N1—H1 | 0.852 (19) | 2.233 (19) | 2.9277 (14) | 138.7 (16) |
| O2—H2⋯O3 | 0.82 (2) | 2.26 (2) | 2.6605 (12) | 110.6 (16) |
| O2—H2⋯O6 | 0.82 (2) | 1.79 (2) | 2.5564 (13) | 153.4 (19) |
| O6—H6⋯Cl2i | 0.742 (19) | 2.761 (19) | 3.3342 (9) | 136.0 (18) |
| O6—H6⋯O3i | 0.742 (19) | 2.119 (19) | 2.7812 (12) | 149 (2) |
| C8—H8 | 0.99 | 2.51 | 3.4115 (15) | 152 |
Symmetry codes: (i) ; (ii) ; (iii) .