| Literature DB >> 22199817 |
Wedad M Al-Adiwish, W A Yaacob, D Adan, Mohamed Ibrahim Mohamed Tahir, Mohammad B Kassim.
Abstract
In the title compound, C(9)H(12)N(4)O, the piperidine ring adopts a chair conformation and makes a dihedral angle of 42.49 (11)° with the approximately planar pyrazole moiety [maximum deviation = 0.038 (2) Å]. In the crystal, N-H⋯O and N-H⋯N hydrogen bonds and a weak C-H⋯O inter-action link the mol-ecules into sheets lying parallel to (110).Entities:
Year: 2011 PMID: 22199817 PMCID: PMC3238968 DOI: 10.1107/S1600536811047714
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H12N4O | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 527 K |
| Cu | |
| Cell parameters from 3129 reflections | |
| θ = 5–71° | |
| α = 89.280 (6)° | µ = 0.77 mm−1 |
| β = 75.934 (7)° | |
| γ = 71.906 (6)° | Block, colourless |
| 0.22 × 0.19 × 0.13 mm |
| Oxford Diffraction Gemini diffractometer | 1803 independent reflections |
| Radiation source: fine-focus sealed tube | 1627 reflections with |
| graphite | |
| ω/2θ scans | θmax = 70.9°, θmin = 5.2° |
| Absorption correction: multi-scan ( | |
| 5083 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1803 reflections | (Δ/σ)max < 0.001 |
| 127 parameters | Δρmax = 0.74 e Å−3 |
| 0 restraints | Δρmin = −0.61 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat (Cosier & Glazer, 1986) with a nominal stability of 0.1 K.Cosier, J. & Glazer, A.M., 1986. J. Appl. Cryst. 105 107. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.2334 (2) | 0.03312 (18) | 0.39572 (17) | 0.0334 (4) | |
| N1 | 0.8756 (2) | 0.6211 (2) | 0.2901 (2) | 0.0306 (4) | |
| N2 | 0.8011 (2) | 0.3667 (2) | 0.38329 (19) | 0.0273 (4) | |
| H2 | 0.6730 | 0.4130 | 0.4070 | 0.033* | |
| N3 | 0.9078 (2) | 0.1884 (2) | 0.39566 (19) | 0.0285 (4) | |
| H3 | 0.8563 | 0.1043 | 0.4146 | 0.034* | |
| N4 | 1.4774 (3) | 0.3703 (3) | 0.2487 (2) | 0.0397 (5) | |
| C1 | 1.0124 (3) | 0.7167 (3) | 0.2139 (3) | 0.0349 (5) | |
| H1A | 1.1496 | 0.6418 | 0.2014 | 0.042* | |
| H1B | 0.9907 | 0.8218 | 0.2789 | 0.042* | |
| C2 | 0.9771 (4) | 0.7692 (3) | 0.0547 (3) | 0.0394 (5) | |
| H2A | 1.0165 | 0.6635 | −0.0144 | 0.047* | |
| H2B | 1.0596 | 0.8413 | 0.0094 | 0.047* | |
| C3 | 0.7585 (4) | 0.8722 (3) | 0.0673 (3) | 0.0424 (6) | |
| H3A | 0.7234 | 0.9851 | 0.1253 | 0.051* | |
| H3B | 0.7386 | 0.8954 | −0.0366 | 0.051* | |
| C4 | 0.6237 (3) | 0.7685 (3) | 0.1497 (3) | 0.0380 (5) | |
| H4A | 0.4847 | 0.8390 | 0.1628 | 0.046* | |
| H4B | 0.6491 | 0.6610 | 0.0865 | 0.046* | |
| C5 | 0.6632 (3) | 0.7218 (3) | 0.3084 (2) | 0.0333 (5) | |
| H5A | 0.6282 | 0.8293 | 0.3742 | 0.040* | |
| H5B | 0.5808 | 0.6517 | 0.3588 | 0.040* | |
| C6 | 0.9374 (3) | 0.4540 (2) | 0.3267 (2) | 0.0249 (4) | |
| C7 | 1.1293 (3) | 0.3363 (2) | 0.3210 (2) | 0.0252 (4) | |
| C8 | 1.1054 (3) | 0.1702 (2) | 0.3729 (2) | 0.0262 (4) | |
| C9 | 1.3185 (3) | 0.3601 (3) | 0.2816 (2) | 0.0289 (5) |
| O1 | 0.0258 (7) | 0.0273 (7) | 0.0420 (8) | −0.0030 (6) | −0.0067 (6) | 0.0098 (6) |
| N1 | 0.0276 (9) | 0.0285 (9) | 0.0356 (9) | −0.0062 (7) | −0.0116 (7) | 0.0092 (7) |
| N2 | 0.0200 (8) | 0.0254 (8) | 0.0343 (9) | −0.0032 (6) | −0.0082 (6) | 0.0071 (6) |
| N3 | 0.0254 (8) | 0.0232 (8) | 0.0371 (9) | −0.0070 (7) | −0.0092 (7) | 0.0072 (6) |
| N4 | 0.0283 (10) | 0.0412 (11) | 0.0545 (11) | −0.0131 (8) | −0.0169 (8) | 0.0118 (8) |
| C1 | 0.0353 (11) | 0.0276 (10) | 0.0462 (12) | −0.0126 (9) | −0.0152 (9) | 0.0095 (9) |
| C2 | 0.0445 (13) | 0.0297 (11) | 0.0387 (12) | −0.0095 (9) | −0.0038 (9) | 0.0084 (9) |
| C3 | 0.0532 (14) | 0.0321 (11) | 0.0331 (11) | −0.0007 (10) | −0.0116 (10) | 0.0076 (9) |
| C4 | 0.0364 (11) | 0.0332 (11) | 0.0388 (11) | 0.0013 (9) | −0.0154 (9) | 0.0018 (9) |
| C5 | 0.0295 (11) | 0.0274 (10) | 0.0382 (11) | −0.0016 (8) | −0.0093 (8) | 0.0061 (8) |
| C6 | 0.0271 (10) | 0.0274 (10) | 0.0215 (8) | −0.0078 (8) | −0.0095 (7) | 0.0035 (7) |
| C7 | 0.0244 (9) | 0.0259 (10) | 0.0257 (9) | −0.0066 (7) | −0.0090 (7) | 0.0029 (7) |
| C8 | 0.0255 (9) | 0.0261 (9) | 0.0252 (9) | −0.0050 (7) | −0.0071 (7) | 0.0016 (7) |
| C9 | 0.0298 (11) | 0.0269 (10) | 0.0318 (10) | −0.0070 (8) | −0.0141 (8) | 0.0065 (8) |
| O1—C8 | 1.246 (2) | C2—H2A | 0.9700 |
| N1—C6 | 1.329 (3) | C2—H2B | 0.9700 |
| N1—C1 | 1.467 (3) | C3—C4 | 1.520 (3) |
| N1—C5 | 1.471 (3) | C3—H3A | 0.9700 |
| N2—C6 | 1.376 (2) | C3—H3B | 0.9700 |
| N2—N3 | 1.408 (2) | C4—C5 | 1.517 (3) |
| N2—H2 | 0.8600 | C4—H4A | 0.9700 |
| N3—C8 | 1.362 (3) | C4—H4B | 0.9700 |
| N3—H3 | 0.8600 | C5—H5A | 0.9700 |
| N4—C9 | 1.148 (3) | C5—H5B | 0.9700 |
| C1—C2 | 1.520 (3) | C6—C7 | 1.407 (3) |
| C1—H1A | 0.9700 | C7—C9 | 1.406 (3) |
| C1—H1B | 0.9700 | C7—C8 | 1.442 (3) |
| C2—C3 | 1.521 (3) | ||
| C6—N1—C1 | 123.24 (17) | C2—C3—H3B | 109.5 |
| C6—N1—C5 | 122.91 (17) | H3A—C3—H3B | 108.1 |
| C1—N1—C5 | 113.60 (16) | C5—C4—C3 | 109.84 (19) |
| C6—N2—N3 | 108.06 (14) | C5—C4—H4A | 109.7 |
| C6—N2—H2 | 126.0 | C3—C4—H4A | 109.7 |
| N3—N2—H2 | 126.0 | C5—C4—H4B | 109.7 |
| C8—N3—N2 | 109.28 (15) | C3—C4—H4B | 109.7 |
| C8—N3—H3 | 125.4 | H4A—C4—H4B | 108.2 |
| N2—N3—H3 | 125.4 | N1—C5—C4 | 110.09 (17) |
| N1—C1—C2 | 109.99 (17) | N1—C5—H5A | 109.6 |
| N1—C1—H1A | 109.7 | C4—C5—H5A | 109.6 |
| C2—C1—H1A | 109.7 | N1—C5—H5B | 109.6 |
| N1—C1—H1B | 109.7 | C4—C5—H5B | 109.6 |
| C2—C1—H1B | 109.7 | H5A—C5—H5B | 108.2 |
| H1A—C1—H1B | 108.2 | N1—C6—N2 | 120.17 (17) |
| C1—C2—C3 | 111.40 (19) | N1—C6—C7 | 132.01 (18) |
| C1—C2—H2A | 109.3 | N2—C6—C7 | 107.82 (16) |
| C3—C2—H2A | 109.3 | C9—C7—C6 | 131.41 (17) |
| C1—C2—H2B | 109.3 | C9—C7—C8 | 121.20 (17) |
| C3—C2—H2B | 109.3 | C6—C7—C8 | 107.35 (16) |
| H2A—C2—H2B | 108.0 | O1—C8—N3 | 124.15 (18) |
| C4—C3—C2 | 110.68 (18) | O1—C8—C7 | 129.26 (18) |
| C4—C3—H3A | 109.5 | N3—C8—C7 | 106.58 (16) |
| C2—C3—H3A | 109.5 | N4—C9—C7 | 176.5 (2) |
| C4—C3—H3B | 109.5 |
| H··· | ||||
| N2—H2···N4i | 0.86 | 2.32 | 2.875 (3) | 123 |
| N3—H3···O1ii | 0.86 | 2.07 | 2.772 (2) | 138 |
| C4—H4A···O1iii | 0.97 | 2.54 | 3.258 (3) | 131 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯N4i | 0.86 | 2.32 | 2.875 (3) | 123 |
| N3—H3⋯O1ii | 0.86 | 2.07 | 2.772 (2) | 138 |
| C4—H4 | 0.97 | 2.54 | 3.258 (3) | 131 |
Symmetry codes: (i) ; (ii) ; (iii) .