Literature DB >> 22199805

(Z)-N-{3-[(2-Chloro-1,3-thia-zol-5-yl)meth-yl]-1,3-thia-zolidin-2-yl-idene}cyanamide.

Yue-Ming Li, Jian-Ye Li, Qian Wang, Ai-You Hao, Tao Sun.   

Abstract

In the title compound, C(8)H(7)ClN(4)S(2), the thia-zole ring is essentially planar [r.m.s. deviation = 0.0011 (2) Å] and conformation of the thia-zolidine ring is twisted on the C-C bond. The C=N bond has a Z configuration.

Entities:  

Year:  2011        PMID: 22199805      PMCID: PMC3238956          DOI: 10.1107/S1600536811047404

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound was synthesized as an inter­mediate for the preparation of pesticides. For the biological activity of this class of compounds, see: Zhang et al. (2000 ▶); Kagabu et al. (2008 ▶). For the synthesis, see: Kozo et al. (1987 ▶); Zuo et al. (2008 ▶). For a related structure. see Li et al. (2010 ▶).

Experimental

Crystal data

C8H7ClN4S2 M = 258.75 Monoclinic, a = 9.6331 (12) Å b = 11.2657 (14) Å c = 10.7675 (13) Å β = 112.433 (2)° V = 1080.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.71 mm−1 T = 273 K 0.15 × 0.10 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.901, T max = 0.932 6191 measured reflections 2440 independent reflections 2075 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.108 S = 0.98 2440 reflections 136 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811047404/lh5358sup1.cif Supplementary material file. DOI: 10.1107/S1600536811047404/lh5358Isup2.mol Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047404/lh5358Isup3.hkl Supplementary material file. DOI: 10.1107/S1600536811047404/lh5358Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H7ClN4S2F(000) = 528
Mr = 258.75Dx = 1.591 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3349 reflections
a = 9.6331 (12) Åθ = 2.7–27.5°
b = 11.2657 (14) ŵ = 0.71 mm1
c = 10.7675 (13) ÅT = 273 K
β = 112.433 (2)°Block, colorless
V = 1080.1 (2) Å30.15 × 0.10 × 0.10 mm
Z = 4
Bruker SMART CCD diffractometer2440 independent reflections
Radiation source: fine-focus sealed tube2075 reflections with I > 2σ(I)
graphiteRint = 0.015
φ and ω scansθmax = 27.5°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.901, Tmax = 0.932k = −11→14
6191 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0632P)2 + 0.5077P] where P = (Fo2 + 2Fc2)/3
2440 reflections(Δ/σ)max < 0.001
136 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.22859 (6)0.11411 (5)0.45559 (5)0.04850 (16)
S20.42112 (6)0.16077 (5)0.07049 (5)0.04881 (17)
Cl10.30959 (8)0.27500 (7)−0.19805 (6)0.0715 (2)
N10.3166 (2)−0.00659 (14)0.29672 (16)0.0445 (4)
C40.3566 (2)0.02118 (18)0.08619 (19)0.0452 (4)
C20.3576 (2)0.08458 (16)0.38105 (18)0.0398 (4)
C30.4033 (3)−0.0430 (2)0.2174 (2)0.0532 (5)
H3A0.3906−0.12770.20040.064*
H3B0.5090−0.02820.26880.064*
C10.1211 (3)−0.0170 (2)0.3809 (3)0.0680 (7)
H1A0.1433−0.08040.44660.082*
H1B0.01440.00000.34810.082*
N20.4818 (2)0.14397 (16)0.40261 (18)0.0485 (4)
C60.3112 (2)0.1563 (2)−0.09762 (19)0.0475 (5)
N30.2328 (2)0.0626 (2)−0.14132 (17)0.0598 (5)
C80.5191 (2)0.22657 (19)0.4975 (2)0.0484 (5)
N40.5597 (3)0.29942 (19)0.5786 (2)0.0680 (6)
C70.1657 (3)−0.05279 (19)0.2663 (2)0.0527 (5)
H7A0.1649−0.13850.25790.063*
H7B0.0961−0.01970.18240.063*
C50.2592 (3)−0.0145 (2)−0.0353 (2)0.0580 (6)
H5A0.2118−0.0880−0.04710.070*
U11U22U33U12U13U23
S10.0521 (3)0.0483 (3)0.0467 (3)0.0000 (2)0.0207 (2)−0.0068 (2)
S20.0445 (3)0.0554 (3)0.0384 (3)−0.0010 (2)0.0067 (2)−0.0027 (2)
Cl10.0720 (4)0.0877 (5)0.0533 (3)0.0002 (3)0.0224 (3)0.0209 (3)
N10.0568 (10)0.0397 (8)0.0339 (7)0.0054 (7)0.0139 (7)−0.0003 (6)
C40.0520 (11)0.0470 (10)0.0371 (9)0.0097 (8)0.0176 (8)−0.0041 (8)
C20.0474 (10)0.0364 (9)0.0315 (8)0.0081 (7)0.0104 (7)0.0059 (7)
C30.0686 (14)0.0465 (11)0.0433 (10)0.0187 (10)0.0200 (10)0.0000 (9)
C10.0731 (16)0.0668 (15)0.0673 (15)−0.0213 (13)0.0304 (13)−0.0164 (12)
N20.0487 (9)0.0484 (9)0.0476 (9)0.0013 (7)0.0174 (8)0.0004 (8)
C60.0418 (10)0.0644 (13)0.0353 (9)0.0028 (9)0.0137 (8)0.0014 (9)
N30.0615 (11)0.0772 (13)0.0347 (8)−0.0110 (10)0.0114 (8)−0.0067 (9)
C80.0432 (10)0.0453 (11)0.0526 (11)−0.0015 (8)0.0139 (9)0.0059 (9)
N40.0686 (13)0.0557 (12)0.0721 (13)−0.0149 (10)0.0185 (11)−0.0115 (10)
C70.0626 (13)0.0431 (10)0.0436 (10)−0.0065 (9)0.0105 (9)−0.0029 (9)
C50.0721 (14)0.0561 (13)0.0446 (11)−0.0100 (11)0.0210 (10)−0.0122 (10)
S1—C21.749 (2)C3—H3B0.9700
S1—C11.807 (2)C1—C71.508 (3)
S2—C61.714 (2)C1—H1A0.9700
S2—C41.723 (2)C1—H1B0.9700
Cl1—C61.716 (2)N2—C81.326 (3)
N1—C21.327 (2)C6—N31.279 (3)
N1—C71.459 (3)N3—C51.378 (3)
N1—C31.463 (3)C8—N41.153 (3)
C4—C51.348 (3)C7—H7A0.9700
C4—C31.495 (3)C7—H7B0.9700
C2—N21.313 (3)C5—H5A0.9300
C3—H3A0.9700
C2—S1—C191.54 (11)S1—C1—H1A110.4
C6—S2—C488.65 (10)C7—C1—H1B110.4
C2—N1—C7116.13 (17)S1—C1—H1B110.4
C2—N1—C3121.99 (18)H1A—C1—H1B108.6
C7—N1—C3120.70 (17)C2—N2—C8117.03 (18)
C5—C4—C3128.3 (2)N3—C6—S2116.92 (17)
C5—C4—S2108.70 (17)N3—C6—Cl1123.34 (16)
C3—C4—S2123.00 (16)S2—C6—Cl1119.75 (13)
N2—C2—N1121.90 (18)C6—N3—C5108.62 (18)
N2—C2—S1125.56 (15)N4—C8—N2175.7 (2)
N1—C2—S1112.54 (15)N1—C7—C1106.93 (17)
N1—C3—C4112.53 (17)N1—C7—H7A110.3
N1—C3—H3A109.1C1—C7—H7A110.3
C4—C3—H3A109.1N1—C7—H7B110.3
N1—C3—H3B109.1C1—C7—H7B110.3
C4—C3—H3B109.1H7A—C7—H7B108.6
H3A—C3—H3B107.8C4—C5—N3117.1 (2)
C7—C1—S1106.81 (17)C4—C5—H5A121.4
C7—C1—H1A110.4N3—C5—H5A121.4
C6—S2—C4—C5−0.26 (17)N1—C2—N2—C8−174.14 (18)
C6—S2—C4—C3−178.81 (18)S1—C2—N2—C86.2 (3)
C7—N1—C2—N2−170.80 (17)C4—S2—C6—N30.15 (19)
C3—N1—C2—N2−3.1 (3)C4—S2—C6—Cl1179.78 (14)
C7—N1—C2—S18.9 (2)S2—C6—N3—C50.0 (3)
C3—N1—C2—S1176.56 (14)Cl1—C6—N3—C5−179.61 (17)
C1—S1—C2—N2−174.02 (19)C2—N1—C7—C1−22.8 (2)
C1—S1—C2—N16.31 (16)C3—N1—C7—C1169.36 (19)
C2—N1—C3—C4−88.0 (2)S1—C1—C7—N125.2 (2)
C7—N1—C3—C479.1 (2)C3—C4—C5—N3178.8 (2)
C5—C4—C3—N1−95.7 (3)S2—C4—C5—N30.3 (3)
S2—C4—C3—N182.6 (2)C6—N3—C5—C4−0.2 (3)
C2—S1—C1—C7−18.40 (19)
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