Literature DB >> 22199794

N,N-Bis(quinolin-8-yl)-2,2'-[(1,3,4-thia-diazole-2,5-di-yl)bis-(sulfanedi-yl)]diacetamide monohydrate.

Xiao-Feng Li, Yan An, Qing-Hua Huang, Yong-Hong Wen.   

Abstract

In the title compound, C(24)H(18)N(6)O(2)S(3)·H(2)O, the thia-diazole ring makes dihedral angles of 78.00 (13) and 77.27 (13)° with the quinoline ring systems. In the crystal, mol-ecules are linked into a two-dimensional network by O-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22199794      PMCID: PMC3238945          DOI: 10.1107/S1600536811047222

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of 2,5-dimercapto-1,3,4-thia­diazole, see: Vullo et al. (2003 ▶); Gurn (2001 ▶). For related 2,5-dimercapto-1,3,4-thia­diazole structures, see: Wen et al. (2005 ▶); Zhang et al. (2005 ▶).

Experimental

Crystal data

C24H18N6O2S3·H2O M = 536.64 Monoclinic, a = 10.8215 (8) Å b = 10.2355 (8) Å c = 21.5510 (16) Å β = 90.068 (1)° V = 2387.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 293 K 0.15 × 0.10 × 0.10 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.949, T max = 0.966 12711 measured reflections 4542 independent reflections 3469 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.109 S = 1.02 4542 reflections 333 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker 2001 ▶); cell refinement: SAINT (Bruker 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811047222/hg5124sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047222/hg5124Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811047222/hg5124Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H18N6O2S3·H2OF(000) = 1112
Mr = 536.64Dx = 1.493 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2913 reflections
a = 10.8215 (8) Åθ = 2.2–24.6°
b = 10.2355 (8) ŵ = 0.35 mm1
c = 21.5510 (16) ÅT = 293 K
β = 90.068 (1)°Prism, brown
V = 2387.1 (3) Å30.15 × 0.10 × 0.10 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer4542 independent reflections
Radiation source: fine-focus sealed tube3469 reflections with I > 2σ(I)
graphiteRint = 0.031
phi and ω scansθmax = 25.7°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→13
Tmin = 0.949, Tmax = 0.966k = −12→11
12711 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0551P)2 + 0.3494P] where P = (Fo2 + 2Fc2)/3
4542 reflections(Δ/σ)max < 0.001
333 parametersΔρmax = 0.28 e Å3
3 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.48854 (6)0.33999 (6)0.03568 (3)0.04181 (18)
S20.65584 (6)0.67713 (6)0.23342 (3)0.04294 (18)
S30.52541 (6)0.56902 (7)0.12152 (3)0.0484 (2)
N20.93916 (17)0.68189 (19)0.23701 (8)0.0376 (5)
H20.88600.72720.21660.045*
N40.68075 (18)0.4337 (2)0.18382 (9)0.0409 (5)
N50.78366 (18)0.4925 (2)−0.08496 (9)0.0445 (5)
N60.98890 (17)0.8914 (2)0.16646 (9)0.0422 (5)
O20.95579 (16)0.5195 (2)0.30789 (9)0.0598 (5)
C241.0876 (2)0.8188 (2)0.18599 (10)0.0342 (5)
C161.0642 (2)0.7078 (2)0.22398 (10)0.0344 (5)
O10.76858 (17)0.09593 (19)0.04223 (9)0.0592 (5)
C80.8872 (2)0.4250 (2)−0.06819 (10)0.0375 (5)
C100.7060 (2)0.1861 (2)0.02251 (10)0.0395 (6)
C201.2107 (2)0.8493 (2)0.16943 (11)0.0374 (5)
C150.8927 (2)0.5951 (2)0.27744 (10)0.0383 (5)
C90.8725 (2)0.3130 (2)−0.02972 (10)0.0382 (5)
N30.63967 (18)0.35305 (19)0.13605 (8)0.0413 (5)
N10.75026 (17)0.2858 (2)−0.01150 (9)0.0416 (5)
H10.69580.3411−0.02400.050*
C130.62927 (19)0.5483 (2)0.18185 (10)0.0353 (5)
C41.0072 (2)0.4606 (3)−0.08780 (11)0.0435 (6)
C120.5590 (2)0.4104 (2)0.10073 (10)0.0361 (5)
C140.7546 (2)0.5972 (2)0.28903 (10)0.0398 (6)
H14A0.74100.63840.32900.080*
H14B0.72710.50740.29270.080*
C110.5678 (2)0.1851 (2)0.03428 (11)0.0416 (6)
H11A0.55370.14230.07380.080*
H11B0.52950.13140.00250.080*
C10.9732 (2)0.2404 (3)−0.01294 (12)0.0499 (7)
H1A0.96330.16630.01150.060*
C191.3081 (2)0.7714 (3)0.19269 (12)0.0467 (6)
H191.38950.79200.18310.056*
C211.2295 (2)0.9559 (3)0.12920 (12)0.0461 (6)
H211.30890.97830.11660.055*
C221.1310 (3)1.0255 (3)0.10913 (12)0.0513 (7)
H221.14181.09580.08240.062*
C60.9135 (3)0.6360 (3)−0.14421 (12)0.0560 (7)
H60.91860.7077−0.17050.067*
C171.1607 (2)0.6324 (2)0.24427 (11)0.0432 (6)
H171.14560.55840.26820.052*
C181.2827 (2)0.6669 (3)0.22894 (12)0.0506 (7)
H181.34760.61660.24410.061*
C21.0919 (2)0.2781 (3)−0.03267 (13)0.0585 (8)
H2A1.15990.2284−0.02080.070*
C231.0124 (3)0.9901 (3)0.12920 (12)0.0517 (7)
H230.94591.03970.11530.062*
C70.7990 (3)0.5934 (3)−0.12173 (12)0.0542 (7)
H70.72900.6398−0.13370.065*
C31.1092 (2)0.3847 (3)−0.06834 (13)0.0552 (7)
H31.18870.4084−0.08020.066*
C51.0168 (3)0.5704 (3)−0.12682 (12)0.0520 (7)
H51.09390.5980−0.14070.062*
O1W0.6164 (3)−0.1290 (2)0.08683 (12)0.0789 (7)
H1WA0.679 (6)−0.071 (7)0.073 (3)0.27 (4)*
H1WB0.593 (4)−0.085 (4)0.1230 (19)0.130 (17)*
U11U22U33U12U13U23
S10.0407 (4)0.0475 (4)0.0372 (3)0.0041 (3)−0.0073 (3)−0.0041 (3)
S20.0381 (3)0.0438 (4)0.0470 (4)0.0016 (3)−0.0049 (3)−0.0076 (3)
S30.0509 (4)0.0457 (4)0.0487 (4)0.0147 (3)−0.0176 (3)−0.0088 (3)
N20.0308 (10)0.0446 (12)0.0373 (10)0.0012 (8)−0.0025 (8)0.0077 (9)
N40.0423 (11)0.0442 (13)0.0363 (11)0.0041 (9)−0.0060 (9)−0.0003 (9)
N50.0432 (12)0.0470 (13)0.0434 (12)−0.0013 (10)0.0001 (9)0.0033 (10)
N60.0392 (11)0.0471 (13)0.0403 (11)0.0049 (9)0.0019 (9)0.0064 (10)
O20.0464 (11)0.0685 (13)0.0645 (12)0.0073 (9)0.0055 (9)0.0286 (10)
C240.0353 (13)0.0353 (13)0.0319 (11)0.0013 (10)−0.0001 (10)−0.0070 (10)
C160.0321 (12)0.0392 (14)0.0321 (12)0.0000 (10)−0.0004 (9)−0.0036 (10)
O10.0534 (11)0.0576 (13)0.0666 (12)0.0114 (9)0.0089 (9)0.0233 (10)
C80.0389 (13)0.0430 (14)0.0307 (12)−0.0013 (10)0.0004 (10)−0.0067 (11)
C100.0451 (14)0.0397 (14)0.0337 (12)0.0017 (11)−0.0002 (10)0.0017 (11)
C200.0350 (13)0.0375 (14)0.0398 (13)−0.0025 (10)0.0018 (10)−0.0083 (11)
C150.0380 (13)0.0415 (14)0.0355 (12)−0.0014 (11)−0.0010 (10)−0.0017 (11)
C90.0379 (13)0.0454 (15)0.0313 (12)0.0014 (11)0.0027 (10)−0.0061 (11)
N30.0487 (12)0.0406 (12)0.0345 (10)0.0035 (9)−0.0069 (9)−0.0001 (9)
N10.0385 (11)0.0450 (12)0.0414 (11)0.0037 (9)0.0025 (9)0.0054 (10)
C130.0276 (11)0.0439 (14)0.0346 (12)−0.0019 (10)0.0010 (9)0.0009 (11)
C40.0447 (15)0.0487 (16)0.0373 (13)−0.0034 (12)0.0056 (11)−0.0073 (12)
C120.0329 (12)0.0422 (14)0.0331 (12)0.0008 (10)0.0010 (10)0.0006 (10)
C140.0366 (13)0.0502 (16)0.0326 (12)−0.0058 (11)0.0007 (10)−0.0035 (11)
C110.0453 (14)0.0381 (14)0.0415 (13)−0.0019 (11)0.0010 (11)−0.0014 (11)
C10.0477 (16)0.0579 (18)0.0440 (14)0.0072 (13)0.0041 (12)0.0048 (13)
C190.0324 (13)0.0504 (16)0.0574 (16)−0.0016 (11)0.0048 (11)−0.0051 (13)
C210.0440 (14)0.0458 (16)0.0484 (15)−0.0084 (12)0.0081 (12)−0.0052 (12)
C220.0588 (17)0.0461 (16)0.0492 (15)−0.0045 (13)0.0042 (13)0.0104 (13)
C60.067 (2)0.0495 (17)0.0520 (16)−0.0082 (14)0.0080 (14)0.0066 (13)
C170.0412 (14)0.0404 (15)0.0479 (14)0.0023 (11)0.0007 (11)0.0053 (12)
C180.0353 (14)0.0530 (17)0.0634 (17)0.0087 (12)−0.0035 (12)0.0026 (14)
C20.0413 (15)0.076 (2)0.0586 (17)0.0156 (14)0.0047 (13)0.0043 (16)
C230.0528 (17)0.0515 (17)0.0507 (16)0.0107 (13)0.0016 (12)0.0124 (13)
C70.0529 (17)0.0523 (18)0.0575 (17)0.0025 (13)0.0021 (13)0.0093 (14)
C30.0374 (15)0.072 (2)0.0567 (17)0.0002 (13)0.0064 (12)−0.0029 (15)
C50.0480 (16)0.0574 (18)0.0505 (16)−0.0131 (13)0.0100 (12)−0.0044 (14)
O1W0.0971 (18)0.0642 (15)0.0753 (16)−0.0058 (13)−0.0050 (13)−0.0143 (13)
S1—C121.750 (2)N1—H10.8600
S1—C111.803 (3)C4—C51.407 (4)
S2—C131.748 (2)C4—C31.414 (4)
S2—C141.801 (2)C14—H14A0.9700
S3—C121.723 (2)C14—H14B0.9700
S3—C131.731 (2)C11—H11A0.9700
N2—C151.343 (3)C11—H11B0.9700
N2—C161.408 (3)C1—C21.408 (4)
N2—H20.8600C1—H1A0.9300
N4—C131.299 (3)C19—C181.353 (4)
N4—N31.392 (3)C19—H190.9300
N5—C71.313 (3)C21—C221.352 (4)
N5—C81.365 (3)C21—H210.9300
N6—C231.316 (3)C22—C231.403 (4)
N6—C241.367 (3)C22—H220.9300
O2—C151.222 (3)C6—C51.357 (4)
C24—C201.414 (3)C6—C71.400 (4)
C24—C161.424 (3)C6—H60.9300
C16—C171.370 (3)C17—C181.406 (3)
O1—C101.221 (3)C17—H170.9300
C8—C41.414 (3)C18—H180.9300
C8—C91.424 (3)C2—C31.347 (4)
C10—N11.345 (3)C2—H2A0.9300
C10—C111.517 (3)C23—H230.9300
C20—C211.409 (3)C7—H70.9300
C20—C191.413 (3)C3—H30.9300
C15—C141.516 (3)C5—H50.9300
C9—C11.367 (3)O1W—H1WA0.95 (6)
C9—N11.408 (3)O1W—H1WB0.93 (4)
N3—C121.298 (3)
C12—S1—C1199.71 (11)C15—C14—H14B107.6
C13—S2—C14100.22 (11)S2—C14—H14B107.6
C12—S3—C1386.72 (11)H14A—C14—H14B107.1
C15—N2—C16127.9 (2)C10—C11—S1117.78 (17)
C15—N2—H2116.0C10—C11—H11A107.9
C16—N2—H2116.0S1—C11—H11A107.9
C13—N4—N3112.00 (18)C10—C11—H11B107.9
C7—N5—C8117.0 (2)S1—C11—H11B107.9
C23—N6—C24117.0 (2)H11A—C11—H11B107.2
N6—C24—C20122.5 (2)C9—C1—C2119.9 (3)
N6—C24—C16118.1 (2)C9—C1—H1A120.0
C20—C24—C16119.3 (2)C2—C1—H1A120.0
C17—C16—N2124.3 (2)C18—C19—C20120.0 (2)
C17—C16—C24119.8 (2)C18—C19—H19120.0
N2—C16—C24115.88 (19)C20—C19—H19120.0
N5—C8—C4123.0 (2)C22—C21—C20119.3 (2)
N5—C8—C9118.0 (2)C22—C21—H21120.3
C4—C8—C9119.1 (2)C20—C21—H21120.3
O1—C10—N1124.5 (2)C21—C22—C23119.1 (2)
O1—C10—C11118.9 (2)C21—C22—H22120.4
N1—C10—C11116.6 (2)C23—C22—H22120.4
C21—C20—C19123.2 (2)C5—C6—C7118.7 (3)
C21—C20—C24117.6 (2)C5—C6—H6120.7
C19—C20—C24119.2 (2)C7—C6—H6120.7
O2—C15—N2123.9 (2)C16—C17—C18119.9 (2)
O2—C15—C14118.1 (2)C16—C17—H17120.0
N2—C15—C14117.8 (2)C18—C17—H17120.0
C1—C9—N1124.6 (2)C19—C18—C17121.7 (2)
C1—C9—C8120.1 (2)C19—C18—H18119.2
N1—C9—C8115.3 (2)C17—C18—H18119.2
C12—N3—N4112.3 (2)C3—C2—C1121.5 (3)
C10—N1—C9129.6 (2)C3—C2—H2A119.3
C10—N1—H1115.2C1—C2—H2A119.3
C9—N1—H1115.2N6—C23—C22124.3 (2)
N4—C13—S3114.42 (17)N6—C23—H23117.8
N4—C13—S2126.16 (17)C22—C23—H23117.8
S3—C13—S2119.42 (14)N5—C7—C6124.5 (3)
C5—C4—C3123.9 (2)N5—C7—H7117.8
C5—C4—C8117.0 (2)C6—C7—H7117.8
C3—C4—C8119.1 (2)C2—C3—C4120.3 (2)
N3—C12—S3114.56 (17)C2—C3—H3119.8
N3—C12—S1125.12 (19)C4—C3—H3119.8
S3—C12—S1120.31 (13)C6—C5—C4119.9 (2)
C15—C14—S2118.78 (16)C6—C5—H5120.1
C15—C14—H14A107.6C4—C5—H5120.1
S2—C14—H14A107.6H1WA—O1W—H1WB99 (4)
C23—N6—C24—C202.3 (3)N4—N3—C12—S30.5 (3)
C23—N6—C24—C16−177.1 (2)N4—N3—C12—S1179.22 (15)
C15—N2—C16—C1710.7 (4)C13—S3—C12—N3−0.37 (18)
C15—N2—C16—C24−170.7 (2)C13—S3—C12—S1−179.18 (15)
N6—C24—C16—C17179.8 (2)C11—S1—C12—N3−3.3 (2)
C20—C24—C16—C170.3 (3)C11—S1—C12—S3175.39 (14)
N6—C24—C16—N21.1 (3)O2—C15—C14—S2−165.45 (19)
C20—C24—C16—N2−178.34 (19)N2—C15—C14—S218.5 (3)
C7—N5—C8—C41.0 (3)C13—S2—C14—C1587.36 (19)
C7—N5—C8—C9−178.3 (2)O1—C10—C11—S1154.2 (2)
N6—C24—C20—C21−2.6 (3)N1—C10—C11—S1−28.2 (3)
C16—C24—C20—C21176.8 (2)C12—S1—C11—C10−64.46 (19)
N6—C24—C20—C19178.5 (2)N1—C9—C1—C2−178.6 (2)
C16—C24—C20—C19−2.1 (3)C8—C9—C1—C21.3 (4)
C16—N2—C15—O2−3.4 (4)C21—C20—C19—C18−177.0 (2)
C16—N2—C15—C14172.5 (2)C24—C20—C19—C181.8 (4)
N5—C8—C9—C1178.4 (2)C19—C20—C21—C22−180.0 (2)
C4—C8—C9—C1−0.9 (3)C24—C20—C21—C221.2 (3)
N5—C8—C9—N1−1.7 (3)C20—C21—C22—C230.4 (4)
C4—C8—C9—N1179.0 (2)N2—C16—C17—C18−179.7 (2)
C13—N4—N3—C12−0.3 (3)C24—C16—C17—C181.8 (3)
O1—C10—N1—C9−2.8 (4)C20—C19—C18—C170.3 (4)
C11—C10—N1—C9179.8 (2)C16—C17—C18—C19−2.1 (4)
C1—C9—N1—C10−2.6 (4)C9—C1—C2—C3−0.3 (4)
C8—C9—N1—C10177.5 (2)C24—N6—C23—C22−0.6 (4)
N3—N4—C13—S30.1 (2)C21—C22—C23—N6−0.7 (4)
N3—N4—C13—S2179.95 (15)C8—N5—C7—C6−0.4 (4)
C12—S3—C13—N40.17 (18)C5—C6—C7—N5−0.7 (4)
C12—S3—C13—S2−179.74 (14)C1—C2—C3—C4−1.1 (4)
C14—S2—C13—N4−5.8 (2)C5—C4—C3—C2−177.7 (3)
C14—S2—C13—S3174.10 (13)C8—C4—C3—C21.4 (4)
N5—C8—C4—C5−0.6 (3)C7—C6—C5—C41.1 (4)
C9—C8—C4—C5178.7 (2)C3—C4—C5—C6178.6 (3)
N5—C8—C4—C3−179.8 (2)C8—C4—C5—C6−0.5 (4)
C9—C8—C4—C3−0.4 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O10.95 (7)2.07 (7)2.990 (3)162 (6)
O1W—H1WB···O2i0.94 (4)1.91 (4)2.841 (3)175 (4)
C11—H11B···O1Wii0.972.493.332 (4)145
C23—H23···O1iii0.932.553.411 (4)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O10.95 (7)2.07 (7)2.990 (3)162 (6)
O1W—H1WB⋯O2i0.94 (4)1.91 (4)2.841 (3)175 (4)
C11—H11B⋯O1Wii0.972.493.332 (4)145
C23—H23⋯O1iii0.932.553.411 (4)155

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Carbonic anhydrase inhibitors: inhibition of the tumor-associated isozyme IX with aromatic and heterocyclic sulfonamides.

Authors:  Daniela Vullo; Marco Franchi; Enzo Gallori; Jaromir Pastorek; Andrea Scozzafava; Silvia Pastorekova; Claudiu T Supuran
Journal:  Bioorg Med Chem Lett       Date:  2003-03-24       Impact factor: 2.823

  2 in total

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