Literature DB >> 22199791

(7aR*,12bS*)-8,12b-Dihydro-7aH-indeno-[1',2':5,6][1,4]selenazino[2,3,4-ij]quinolin-13-ium hydrogen sulfate.

Gunay Z Mammadova, Zhanna V Matsulevich, Galina N Borisova, Alexander V Borisov, Victor N Khrustalev.   

Abstract

In the title compound, C(18)H(14)NSe(+)·HSO(4) (-), the cyclo-pentene ring in the cation has an envelope conformation while the central six-membered 1,4-selenazine ring adopts a sofa conformation. The dihedral angle between the planes of the terminal benzene rings is 68.08 (11)°. In the crystal, the anions form chains along the c axis through O-H⋯O hydrogen bonds. Weak C-H⋯O and C-H⋯π hydrogen bonds, as well as attractive Se⋯Se [3.5608 (8) Å] inter-actions, further consolidate the crystal structure.

Entities:  

Year:  2011        PMID: 22199791      PMCID: PMC3238942          DOI: 10.1107/S1600536811047167

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological properties of selenium- and nitro­gen-containing heterocycles, see: Mugesh et al. (2001 ▶); Koketsu & Ishihara (2003 ▶); Nogueira et al. (2004 ▶); Bhabak & Mugesh (2007 ▶); Mlochowski & Giurg (2009 ▶); Back (2009 ▶); Mukherjee et al. (2010 ▶). For related compounds, see: Wright (2001 ▶); Garud et al. (2007 ▶); Sommen et al. (2007 ▶); Borisov et al. (2011 ▶).

Experimental

Crystal data

C18H14NSeHSO4 M = 420.34 Monoclinic, a = 11.1355 (11) Å b = 19.5653 (19) Å c = 7.9609 (8) Å β = 107.005 (2)° V = 1658.6 (3) Å3 Z = 4 Mo Kα radiation μ = 2.41 mm−1 T = 120 K 0.20 × 0.02 × 0.02 mm

Data collection

Bruker SMART 1K CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.644, T max = 0.953 14396 measured reflections 4007 independent reflections 2902 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.114 S = 1.00 4007 reflections 226 parameters H-atom parameters constrained Δρmax = 1.00 e Å−3 Δρmin = −0.51 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811047167/rk2313sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047167/rk2313Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14NSe+·HSO4F(000) = 848
Mr = 420.34Dx = 1.683 Mg m3
Monoclinic, P21/cMelting point = 502–503 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.1355 (11) ÅCell parameters from 2341 reflections
b = 19.5653 (19) Åθ = 2.2–24.8°
c = 7.9609 (8) ŵ = 2.41 mm1
β = 107.005 (2)°T = 120 K
V = 1658.6 (3) Å3Needle, orange
Z = 40.20 × 0.02 × 0.02 mm
Bruker SMART 1K CCD diffractometer4007 independent reflections
Radiation source: fine-focus sealed tube2902 reflections with I > 2σ(I)
graphiteRint = 0.054
φ and ω scansθmax = 28.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998)h = −14→14
Tmin = 0.644, Tmax = 0.953k = −24→25
14396 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: difference Fourier map
wR(F2) = 0.114H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.054P)2 + 2.36P] where P = (Fo2 + 2Fc2)/3
4007 reflections(Δ/σ)max = 0.001
226 parametersΔρmax = 1.00 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1870 (3)0.58708 (18)0.3376 (5)0.0216 (7)
H10.20130.62770.40590.026*
C20.1119 (3)0.53643 (18)0.3759 (5)0.0242 (8)
H20.07720.54200.47080.029*
C30.0884 (3)0.47893 (19)0.2765 (5)0.0236 (7)
H30.03650.44410.30100.028*
C3A0.1413 (3)0.47090 (17)0.1365 (4)0.0183 (7)
C40.1189 (3)0.40994 (19)0.0350 (5)0.0227 (7)
H40.06480.37560.05640.027*
C50.1763 (3)0.40145 (19)−0.0938 (5)0.0246 (8)
H50.16220.3608−0.16210.030*
C60.2556 (3)0.45222 (19)−0.1259 (4)0.0224 (7)
H60.29380.4452−0.21670.027*
C6A0.2801 (3)0.51193 (17)−0.0303 (4)0.0192 (7)
Se70.40049 (3)0.571862 (19)−0.07394 (4)0.02345 (12)
C7A0.3453 (3)0.65434 (18)0.0190 (4)0.0218 (7)
H7A0.27190.6763−0.06790.026*
C80.4599 (3)0.70229 (18)0.0743 (4)0.0242 (8)
H8A0.51250.6978−0.00610.029*
H8B0.43340.75050.07570.029*
C8A0.5298 (3)0.67800 (17)0.2574 (4)0.0208 (7)
C90.6519 (3)0.69027 (18)0.3579 (5)0.0237 (7)
H90.70650.71710.31290.028*
C100.6934 (3)0.6625 (2)0.5264 (5)0.0274 (8)
H100.77720.67040.59670.033*
C110.6130 (3)0.6235 (2)0.5921 (5)0.0274 (8)
H110.64260.60480.70700.033*
C120.4901 (3)0.61157 (18)0.4919 (4)0.0215 (7)
H120.43490.58510.53690.026*
C12A0.4499 (3)0.63916 (16)0.3249 (4)0.0164 (6)
C12B0.3200 (3)0.64029 (17)0.1943 (4)0.0182 (7)
H12B0.27700.68180.22210.022*
N130.2398 (2)0.58057 (13)0.2079 (3)0.0155 (5)
C13A0.2219 (3)0.52230 (17)0.1038 (4)0.0165 (6)
S10.07534 (8)0.71231 (4)0.61913 (10)0.01767 (18)
O10.1979 (2)0.70926 (12)0.5924 (3)0.0217 (5)
O20.0535 (2)0.66144 (13)0.7377 (3)0.0268 (6)
O30.0469 (2)0.78149 (12)0.6674 (3)0.0232 (5)
O4−0.0231 (2)0.69555 (14)0.4394 (3)0.0290 (6)
H4O0.01040.70650.34400.043*
U11U22U33U12U13U23
C10.0230 (17)0.0187 (18)0.0244 (17)0.0016 (14)0.0093 (14)−0.0044 (13)
C20.0268 (18)0.025 (2)0.0273 (18)−0.0002 (15)0.0177 (15)−0.0031 (14)
C30.0234 (17)0.0207 (18)0.0289 (18)−0.0007 (14)0.0111 (15)0.0006 (14)
C3A0.0149 (15)0.0174 (17)0.0213 (16)0.0016 (13)0.0034 (13)−0.0001 (13)
C40.0169 (16)0.0240 (19)0.0252 (17)−0.0037 (14)0.0028 (14)−0.0028 (14)
C50.0223 (18)0.0213 (18)0.0274 (18)−0.0050 (14)0.0028 (15)−0.0100 (14)
C60.0197 (17)0.0265 (19)0.0206 (16)0.0021 (15)0.0052 (14)−0.0053 (14)
C6A0.0184 (16)0.0206 (18)0.0184 (15)−0.0026 (13)0.0049 (13)−0.0009 (13)
Se70.0276 (2)0.0244 (2)0.02247 (19)−0.00505 (15)0.01375 (14)−0.00375 (14)
C7A0.0265 (18)0.0193 (18)0.0191 (16)0.0015 (14)0.0059 (14)0.0041 (13)
C80.032 (2)0.0197 (18)0.0226 (17)−0.0019 (15)0.0101 (15)0.0031 (14)
C8A0.0270 (18)0.0117 (16)0.0262 (17)0.0012 (14)0.0119 (15)−0.0013 (13)
C90.0201 (17)0.0204 (18)0.0335 (19)−0.0041 (14)0.0122 (15)−0.0062 (15)
C100.0180 (17)0.034 (2)0.0269 (18)0.0022 (15)0.0015 (14)−0.0095 (16)
C110.0248 (19)0.029 (2)0.0254 (18)0.0051 (16)0.0026 (15)0.0003 (15)
C120.0204 (17)0.0222 (18)0.0214 (16)0.0024 (14)0.0055 (13)0.0022 (14)
C12A0.0169 (15)0.0141 (16)0.0179 (15)0.0012 (13)0.0046 (12)−0.0031 (12)
C12B0.0186 (16)0.0150 (16)0.0195 (16)−0.0001 (13)0.0034 (13)0.0009 (13)
N130.0144 (13)0.0135 (14)0.0190 (13)0.0012 (10)0.0056 (10)0.0001 (10)
C13A0.0126 (14)0.0155 (16)0.0188 (15)0.0018 (12)0.0007 (12)−0.0017 (12)
S10.0187 (4)0.0188 (4)0.0159 (4)−0.0036 (3)0.0057 (3)−0.0017 (3)
O10.0203 (12)0.0209 (13)0.0244 (12)−0.0030 (10)0.0074 (10)−0.0040 (10)
O20.0313 (14)0.0236 (14)0.0261 (13)−0.0067 (11)0.0095 (11)0.0032 (10)
O30.0317 (14)0.0212 (13)0.0189 (11)0.0032 (11)0.0107 (10)0.0012 (10)
O40.0227 (13)0.0483 (17)0.0163 (12)−0.0130 (12)0.0064 (10)−0.0072 (11)
C1—N131.336 (4)C8—H8A0.9900
C1—C21.386 (5)C8—H8B0.9900
C1—H10.9500C8A—C91.382 (5)
C2—C31.356 (5)C8A—C12A1.391 (4)
C2—H20.9500C9—C101.395 (5)
C3—C3A1.414 (5)C9—H90.9500
C3—H30.9500C10—C111.390 (5)
C3A—C41.421 (5)C10—H100.9500
C3A—C13A1.422 (5)C11—C121.388 (5)
C4—C51.368 (5)C11—H110.9500
C4—H40.9500C12—C12A1.383 (5)
C5—C61.401 (5)C12—H120.9500
C5—H50.9500C12A—C12B1.515 (4)
C6—C6A1.377 (5)C12B—N131.494 (4)
C6—H60.9500C12B—H12B1.0000
C6A—C13A1.416 (4)N13—C13A1.389 (4)
C6A—Se71.888 (3)S1—O21.441 (2)
Se7—C7A1.948 (3)S1—O11.443 (2)
C7A—C12B1.527 (4)S1—O31.467 (2)
C7A—C81.541 (5)S1—O41.562 (2)
C7A—H7A1.0000O4—H4O0.9632
C8—C8A1.514 (5)
N13—C1—C2122.1 (3)C9—C8A—C12A120.2 (3)
N13—C1—H1118.9C9—C8A—C8130.1 (3)
C2—C1—H1118.9C12A—C8A—C8109.7 (3)
C3—C2—C1119.4 (3)C8A—C9—C10118.8 (3)
C3—C2—H2120.3C8A—C9—H9120.6
C1—C2—H2120.3C10—C9—H9120.6
C2—C3—C3A119.9 (3)C11—C10—C9120.5 (3)
C2—C3—H3120.1C11—C10—H10119.8
C3A—C3—H3120.1C9—C10—H10119.8
C3—C3A—C4119.8 (3)C12—C11—C10120.8 (3)
C3—C3A—C13A119.8 (3)C12—C11—H11119.6
C4—C3A—C13A120.3 (3)C10—C11—H11119.6
C5—C4—C3A119.0 (3)C12A—C12—C11118.3 (3)
C5—C4—H4120.5C12A—C12—H12120.8
C3A—C4—H4120.5C11—C12—H12120.8
C4—C5—C6120.5 (3)C12—C12A—C8A121.4 (3)
C4—C5—H5119.7C12—C12A—C12B129.9 (3)
C6—C5—H5119.7C8A—C12A—C12B108.5 (3)
C6A—C6—C5122.3 (3)N13—C12B—C12A114.2 (3)
C6A—C6—H6118.8N13—C12B—C7A118.7 (3)
C5—C6—H6118.8C12A—C12B—C7A103.6 (3)
C6—C6A—C13A118.5 (3)N13—C12B—H12B106.5
C6—C6A—Se7117.5 (3)C12A—C12B—H12B106.5
C13A—C6A—Se7123.8 (2)C7A—C12B—H12B106.5
C6A—Se7—C7A97.16 (15)C1—N13—C13A121.4 (3)
C12B—C7A—C8102.0 (3)C1—N13—C12B112.9 (3)
C12B—C7A—Se7111.2 (2)C13A—N13—C12B125.7 (3)
C8—C7A—Se7106.6 (2)N13—C13A—C6A123.4 (3)
C12B—C7A—H7A112.2N13—C13A—C3A117.3 (3)
C8—C7A—H7A112.2C6A—C13A—C3A119.3 (3)
Se7—C7A—H7A112.2O2—S1—O1114.60 (15)
C8A—C8—C7A103.5 (3)O2—S1—O3112.03 (15)
C8A—C8—H8A111.1O1—S1—O3111.29 (15)
C7A—C8—H8A111.1O2—S1—O4104.34 (15)
C8A—C8—H8B111.1O1—S1—O4107.28 (14)
C7A—C8—H8B111.1O3—S1—O4106.62 (15)
H8A—C8—H8B109.0S1—O4—H4O110.2
N13—C1—C2—C3−1.6 (5)C8—C8A—C12A—C12B−4.2 (4)
C1—C2—C3—C3A0.6 (5)C12—C12A—C12B—N13−30.0 (5)
C2—C3—C3A—C4178.6 (3)C8A—C12A—C12B—N13155.7 (3)
C2—C3—C3A—C13A1.9 (5)C12—C12A—C12B—C7A−160.7 (3)
C3—C3A—C4—C5−176.5 (3)C8A—C12A—C12B—C7A25.1 (3)
C13A—C3A—C4—C50.2 (5)C8—C7A—C12B—N13−162.7 (3)
C3A—C4—C5—C6−0.3 (5)Se7—C7A—C12B—N13−49.4 (4)
C4—C5—C6—C6A0.4 (5)C8—C7A—C12B—C12A−34.8 (3)
C5—C6—C6A—C13A−0.5 (5)Se7—C7A—C12B—C12A78.5 (3)
C5—C6—C6A—Se7174.4 (3)C2—C1—N13—C13A0.1 (5)
C6—C6A—Se7—C7A159.0 (3)C2—C1—N13—C12B−178.1 (3)
C13A—C6A—Se7—C7A−26.4 (3)C12A—C12B—N13—C180.4 (3)
C6A—Se7—C7A—C12B44.9 (3)C7A—C12B—N13—C1−156.9 (3)
C6A—Se7—C7A—C8155.2 (2)C12A—C12B—N13—C13A−97.7 (4)
C12B—C7A—C8—C8A32.3 (3)C7A—C12B—N13—C13A25.0 (4)
Se7—C7A—C8—C8A−84.4 (3)C1—N13—C13A—C6A−177.3 (3)
C7A—C8—C8A—C9163.5 (3)C12B—N13—C13A—C6A0.6 (5)
C7A—C8—C8A—C12A−18.1 (4)C1—N13—C13A—C3A2.3 (4)
C12A—C8A—C9—C100.6 (5)C12B—N13—C13A—C3A−179.7 (3)
C8—C8A—C9—C10178.8 (3)C6—C6A—C13A—N13−179.9 (3)
C8A—C9—C10—C11−0.3 (5)Se7—C6A—C13A—N135.5 (5)
C9—C10—C11—C12−0.2 (6)C6—C6A—C13A—C3A0.5 (5)
C10—C11—C12—C12A0.3 (5)Se7—C6A—C13A—C3A−174.2 (2)
C11—C12—C12A—C8A0.0 (5)C3—C3A—C13A—N13−3.3 (5)
C11—C12—C12A—C12B−173.6 (3)C4—C3A—C13A—N13−179.9 (3)
C9—C8A—C12A—C12−0.5 (5)C3—C3A—C13A—C6A176.4 (3)
C8—C8A—C12A—C12−179.0 (3)C4—C3A—C13A—C6A−0.3 (5)
C9—C8A—C12A—C12B174.4 (3)
Cg is the centroid of the C3A/C4–C6/C6A/C13A ring.
D—H···AD—HH···AD···AD—H···A
O4—H4O···O3i0.961.592.548 (3)171
C1—H1···O10.952.193.114 (4)165
C3—H3···O2ii0.952.283.154 (4)153
C4—H4···O2ii0.952.493.308 (4)144
C5—H5···O4iii0.952.553.367 (4)145
C7A—H7A···O2iv1.002.493.367 (4)146
C12B—H12B···O1i1.002.423.244 (4)139
C12B—H12B···O3i1.002.573.355 (4)135
C11—H11···Cgv0.952.783.679 (4)159
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C3A/C4–C6/C6A/C13A ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4O⋯O3i0.961.592.548 (3)171
C1—H1⋯O10.952.193.114 (4)165
C3—H3⋯O2ii0.952.283.154 (4)153
C4—H4⋯O2ii0.952.493.308 (4)144
C5—H5⋯O4iii0.952.553.367 (4)145
C7A—H7A⋯O2iv1.002.493.367 (4)146
C12B—H12B⋯O1i1.002.423.244 (4)139
C12B—H12B⋯O3i1.002.573.355 (4)135
C11—H11⋯Cgv0.952.783.679 (4)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  6 in total

Review 1.  Chemistry of biologically important synthetic organoselenium compounds.

Authors:  G Mugesh; W W du Mont; H Sies
Journal:  Chem Rev       Date:  2001-07       Impact factor: 60.622

2.  Organoselenium chemistry: role of intramolecular interactions.

Authors:  Anna J Mukherjee; Sanjio S Zade; Harkesh B Singh; Raghavan B Sunoj
Journal:  Chem Rev       Date:  2010-07-14       Impact factor: 60.622

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 4.  Organoselenium and organotellurium compounds: toxicology and pharmacology.

Authors:  Cristina W Nogueira; Gilson Zeni; João B T Rocha
Journal:  Chem Rev       Date:  2004-12       Impact factor: 60.622

5.  Synthesis, characterization, and antioxidant activity of some ebselen analogues.

Authors:  Krishna P Bhabak; Govindasamy Mugesh
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

Review 6.  Isoselenocyanates: a powerful tool for the synthesis of selenium-containing heterocycles.

Authors:  Dinesh Ramesh Garud; Mamoru Koketsu; Hideharu Ishihara
Journal:  Molecules       Date:  2007-03-17       Impact factor: 4.411

  6 in total

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