| Literature DB >> 22199754 |
Yu Yang1, Zhi-Kai Xu, Deng-Ke Yang, Shao-Wu Pan, La-Sheng Jiang.
Abstract
The mol-ecule of the title compound {systematic name: 17,35-bis-[(2-propyn-1-yl-oxy)meth-yl]-2,5,8,11,14,20,23,26,29,32-deca-oxatricyclo-[31.3.1.1(15,19)]octa-triaconta-1(37),15,17,19 (38),33,35-hex-a--ene}, C(36)H(48)O(12), has crystallographic inversion symmetry and adopts a chair-like conformation. The polyether bridges of the macrocycle adopt gauche conformations and the cavity of the macrocycle is collapsed. In the crystal structure, there are weak inter-molecular C-H⋯O hydrogen bonds driven in part by the elevated acidity of acetylenyl H atoms.Entities:
Year: 2011 PMID: 22199754 PMCID: PMC3238901 DOI: 10.1107/S1600536811046435
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C36H48O12 | |
| Triclinic, | |
| Hall symbol: -P 1 | |
| Mo | |
| µ = 0.09 mm−1 | |
| α = 97.213 (2)° | Block, colourless |
| β = 98.658 (2)° | 0.64 × 0.32 × 0.10 mm |
| γ = 99.226 (2)° |
| Bruker APEXII CCD diffractometer | 3108 independent reflections |
| Radiation source: fine-focus sealed tube | 2350 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.2°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 4551 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3108 reflections | (Δ/σ)max < 0.001 |
| 217 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.19258 (19) | 0.18786 (18) | 0.55393 (17) | 0.0405 (4) | |
| H1 | 0.0968 | 0.1897 | 0.5717 | 0.049* | |
| C2 | 0.21585 (18) | 0.15530 (18) | 0.42298 (16) | 0.0393 (4) | |
| C3 | 0.35977 (19) | 0.15509 (19) | 0.39575 (17) | 0.0428 (4) | |
| H3 | 0.3744 | 0.1335 | 0.3068 | 0.051* | |
| C5 | 0.45832 (19) | 0.21882 (18) | 0.63403 (17) | 0.0427 (4) | |
| H5 | 0.5393 | 0.2404 | 0.7049 | 0.051* | |
| C6 | 0.31507 (19) | 0.21810 (18) | 0.65978 (16) | 0.0392 (4) | |
| C8 | −0.13388 (19) | 0.0898 (2) | 0.18269 (18) | 0.0472 (5) | |
| H8A | −0.1242 | −0.0054 | 0.1536 | 0.057* | |
| H8B | −0.2380 | 0.0914 | 0.1867 | 0.057* | |
| C7 | −0.04096 (18) | 0.1423 (2) | 0.32005 (17) | 0.0456 (4) | |
| H7A | −0.0407 | 0.2406 | 0.3455 | 0.055* | |
| H7B | −0.0801 | 0.0923 | 0.3878 | 0.055* | |
| C9 | −0.1580 (2) | 0.1224 (2) | −0.04624 (17) | 0.0513 (5) | |
| H9A | −0.2653 | 0.1062 | −0.0510 | 0.062* | |
| H9B | −0.1291 | 0.0348 | −0.0762 | 0.062* | |
| C10 | 0.4014 (2) | 0.2810 (2) | 0.89901 (17) | 0.0519 (5) | |
| H10A | 0.4619 | 0.3688 | 0.8916 | 0.062* | |
| H10B | 0.4639 | 0.2107 | 0.8987 | 0.062* | |
| C11 | 0.3400 (2) | 0.2938 (2) | 1.02859 (17) | 0.0520 (5) | |
| H11A | 0.2712 | 0.2091 | 1.0311 | 0.062* | |
| H11B | 0.4206 | 0.3065 | 1.1054 | 0.062* | |
| C12 | 0.2334 (2) | 0.4423 (2) | 1.17067 (16) | 0.0492 (5) | |
| H12A | 0.3250 | 0.4829 | 1.2333 | 0.059* | |
| H12B | 0.1886 | 0.3588 | 1.2018 | 0.059* | |
| C13 | 0.1296 (2) | 0.5426 (2) | 1.16786 (17) | 0.0513 (5) | |
| H13A | 0.0356 | 0.4998 | 1.1098 | 0.062* | |
| H13B | 0.1102 | 0.5687 | 1.2587 | 0.062* | |
| C14 | 0.1140 (2) | 0.7742 (2) | 1.13577 (19) | 0.0553 (5) | |
| H14A | 0.1367 | 0.8184 | 1.2299 | 0.066* | |
| H14B | 0.0076 | 0.7388 | 1.1128 | 0.066* | |
| C4 | 0.47982 (19) | 0.18667 (18) | 0.49997 (17) | 0.0408 (4) | |
| C15 | 0.63517 (19) | 0.1857 (2) | 0.46986 (19) | 0.0492 (5) | |
| H15A | 0.6738 | 0.1108 | 0.5088 | 0.059* | |
| H15B | 0.6298 | 0.1666 | 0.3723 | 0.059* | |
| C16 | 0.6984 (3) | 0.4263 (2) | 0.4602 (2) | 0.0663 (6) | |
| H16A | 0.7603 | 0.5112 | 0.5111 | 0.080* | |
| H16B | 0.5954 | 0.4319 | 0.4656 | 0.080* | |
| C18 | 0.7341 (2) | 0.4114 (2) | 0.2047 (2) | 0.0671 (6) | |
| H18 | 0.7476 | 0.4066 | 0.1147 | 0.081* | |
| C17 | 0.7173 (2) | 0.4175 (2) | 0.3175 (2) | 0.0567 (5) | |
| O6 | 0.73584 (14) | 0.31229 (15) | 0.52126 (12) | 0.0566 (4) | |
| O1 | 0.10633 (13) | 0.11960 (14) | 0.31046 (11) | 0.0512 (4) | |
| O3 | 0.28037 (13) | 0.24304 (13) | 0.78669 (11) | 0.0463 (3) | |
| O4 | 0.26536 (15) | 0.40777 (14) | 1.03810 (11) | 0.0512 (3) | |
| O5 | 0.19356 (13) | 0.66270 (14) | 1.11802 (12) | 0.0506 (3) | |
| O2 | −0.08593 (13) | 0.17487 (13) | 0.08915 (11) | 0.0490 (3) |
| C1 | 0.0395 (9) | 0.0443 (10) | 0.0403 (10) | 0.0095 (8) | 0.0102 (7) | 0.0095 (8) |
| C2 | 0.0433 (9) | 0.0424 (10) | 0.0335 (9) | 0.0107 (8) | 0.0051 (7) | 0.0089 (7) |
| C3 | 0.0487 (10) | 0.0493 (11) | 0.0342 (9) | 0.0136 (8) | 0.0121 (8) | 0.0088 (8) |
| C5 | 0.0413 (9) | 0.0467 (11) | 0.0391 (10) | 0.0050 (8) | 0.0047 (7) | 0.0095 (8) |
| C6 | 0.0464 (10) | 0.0416 (10) | 0.0313 (9) | 0.0067 (8) | 0.0113 (7) | 0.0076 (7) |
| C8 | 0.0416 (9) | 0.0574 (12) | 0.0425 (10) | 0.0079 (9) | 0.0061 (8) | 0.0098 (9) |
| C7 | 0.0414 (10) | 0.0587 (12) | 0.0398 (10) | 0.0125 (9) | 0.0097 (8) | 0.0122 (9) |
| C9 | 0.0546 (11) | 0.0577 (12) | 0.0383 (10) | 0.0145 (9) | −0.0011 (8) | 0.0002 (9) |
| C10 | 0.0512 (11) | 0.0671 (13) | 0.0349 (10) | 0.0101 (10) | 0.0029 (8) | 0.0043 (9) |
| C11 | 0.0608 (12) | 0.0579 (12) | 0.0353 (10) | 0.0090 (10) | 0.0023 (8) | 0.0089 (9) |
| C12 | 0.0623 (11) | 0.0568 (12) | 0.0271 (9) | 0.0020 (9) | 0.0092 (8) | 0.0103 (8) |
| C13 | 0.0495 (10) | 0.0712 (14) | 0.0298 (9) | 0.0012 (10) | 0.0071 (8) | 0.0074 (9) |
| C14 | 0.0589 (11) | 0.0735 (14) | 0.0369 (10) | 0.0245 (11) | 0.0067 (8) | 0.0070 (9) |
| C4 | 0.0443 (10) | 0.0416 (10) | 0.0399 (10) | 0.0101 (8) | 0.0118 (8) | 0.0106 (8) |
| C15 | 0.0441 (10) | 0.0566 (12) | 0.0510 (11) | 0.0109 (9) | 0.0140 (8) | 0.0148 (9) |
| C16 | 0.0830 (15) | 0.0566 (13) | 0.0629 (14) | 0.0066 (12) | 0.0300 (12) | 0.0094 (11) |
| C18 | 0.0694 (14) | 0.0862 (17) | 0.0565 (14) | 0.0202 (12) | 0.0215 (11) | 0.0315 (12) |
| C17 | 0.0597 (12) | 0.0608 (13) | 0.0564 (13) | 0.0135 (10) | 0.0199 (10) | 0.0201 (10) |
| O6 | 0.0530 (8) | 0.0709 (10) | 0.0438 (8) | −0.0001 (7) | 0.0092 (6) | 0.0150 (7) |
| O1 | 0.0435 (7) | 0.0752 (9) | 0.0350 (7) | 0.0193 (6) | 0.0034 (5) | 0.0017 (6) |
| O3 | 0.0456 (7) | 0.0607 (8) | 0.0307 (6) | 0.0048 (6) | 0.0077 (5) | 0.0051 (6) |
| O4 | 0.0700 (8) | 0.0582 (8) | 0.0279 (6) | 0.0123 (7) | 0.0118 (6) | 0.0114 (6) |
| O5 | 0.0489 (7) | 0.0630 (9) | 0.0454 (7) | 0.0154 (6) | 0.0136 (6) | 0.0163 (6) |
| O2 | 0.0529 (7) | 0.0567 (8) | 0.0336 (7) | 0.0045 (6) | 0.0002 (5) | 0.0078 (6) |
| C1—C2 | 1.376 (2) | C10—H10B | 0.9700 |
| C1—C6 | 1.398 (2) | C11—O4 | 1.409 (2) |
| C1—H1 | 0.9300 | C11—H11A | 0.9700 |
| C2—O1 | 1.3682 (19) | C11—H11B | 0.9700 |
| C2—C3 | 1.396 (2) | C12—O4 | 1.423 (2) |
| C3—C4 | 1.373 (2) | C12—C13 | 1.482 (3) |
| C3—H3 | 0.9300 | C12—H12A | 0.9700 |
| C5—C6 | 1.384 (2) | C12—H12B | 0.9700 |
| C5—C4 | 1.400 (2) | C13—O5 | 1.420 (2) |
| C5—H5 | 0.9300 | C13—H13A | 0.9700 |
| C6—O3 | 1.3672 (19) | C13—H13B | 0.9700 |
| C8—O2 | 1.412 (2) | C14—O5 | 1.423 (2) |
| C8—C7 | 1.497 (2) | C14—C9i | 1.492 (3) |
| C8—H8A | 0.9700 | C14—H14A | 0.9700 |
| C8—H8B | 0.9700 | C14—H14B | 0.9700 |
| C7—O1 | 1.428 (2) | C4—C15 | 1.510 (2) |
| C7—H7A | 0.9700 | C15—O6 | 1.418 (2) |
| C7—H7B | 0.9700 | C15—H15A | 0.9700 |
| C9—O2 | 1.418 (2) | C15—H15B | 0.9700 |
| C9—C14i | 1.492 (3) | C16—O6 | 1.412 (3) |
| C9—H9A | 0.9700 | C16—C17 | 1.468 (3) |
| C9—H9B | 0.9700 | C16—H16A | 0.9700 |
| C10—O3 | 1.431 (2) | C16—H16B | 0.9700 |
| C10—C11 | 1.499 (2) | C18—C17 | 1.167 (3) |
| C10—H10A | 0.9700 | C18—H18 | 0.9300 |
| C2—C1—C6 | 118.97 (15) | C10—C11—H11B | 109.6 |
| C2—C1—H1 | 120.5 | H11A—C11—H11B | 108.1 |
| C6—C1—H1 | 120.5 | O4—C12—C13 | 109.57 (14) |
| O1—C2—C1 | 125.21 (15) | O4—C12—H12A | 109.8 |
| O1—C2—C3 | 114.18 (14) | C13—C12—H12A | 109.8 |
| C1—C2—C3 | 120.60 (15) | O4—C12—H12B | 109.8 |
| C4—C3—C2 | 120.15 (15) | C13—C12—H12B | 109.8 |
| C4—C3—H3 | 119.9 | H12A—C12—H12B | 108.2 |
| C2—C3—H3 | 119.9 | O5—C13—C12 | 109.56 (15) |
| C6—C5—C4 | 119.21 (15) | O5—C13—H13A | 109.8 |
| C6—C5—H5 | 120.4 | C12—C13—H13A | 109.8 |
| C4—C5—H5 | 120.4 | O5—C13—H13B | 109.8 |
| O3—C6—C5 | 124.27 (15) | C12—C13—H13B | 109.8 |
| O3—C6—C1 | 114.76 (14) | H13A—C13—H13B | 108.2 |
| C5—C6—C1 | 120.95 (15) | O5—C14—C9i | 109.25 (15) |
| O2—C8—C7 | 109.34 (15) | O5—C14—H14A | 109.8 |
| O2—C8—H8A | 109.8 | C9i—C14—H14A | 109.8 |
| C7—C8—H8A | 109.8 | O5—C14—H14B | 109.8 |
| O2—C8—H8B | 109.8 | C9i—C14—H14B | 109.8 |
| C7—C8—H8B | 109.8 | H14A—C14—H14B | 108.3 |
| H8A—C8—H8B | 108.3 | C3—C4—C5 | 120.11 (15) |
| O1—C7—C8 | 106.52 (14) | C3—C4—C15 | 119.87 (15) |
| O1—C7—H7A | 110.4 | C5—C4—C15 | 120.02 (16) |
| C8—C7—H7A | 110.4 | O6—C15—C4 | 113.54 (15) |
| O1—C7—H7B | 110.4 | O6—C15—H15A | 108.9 |
| C8—C7—H7B | 110.4 | C4—C15—H15A | 108.9 |
| H7A—C7—H7B | 108.6 | O6—C15—H15B | 108.9 |
| O2—C9—C14i | 108.95 (16) | C4—C15—H15B | 108.9 |
| O2—C9—H9A | 109.9 | H15A—C15—H15B | 107.7 |
| C14i—C9—H9A | 109.9 | O6—C16—C17 | 113.58 (17) |
| O2—C9—H9B | 109.9 | O6—C16—H16A | 108.8 |
| C14i—C9—H9B | 109.9 | C17—C16—H16A | 108.8 |
| H9A—C9—H9B | 108.3 | O6—C16—H16B | 108.8 |
| O3—C10—C11 | 109.13 (15) | C17—C16—H16B | 108.8 |
| O3—C10—H10A | 109.9 | H16A—C16—H16B | 107.7 |
| C11—C10—H10A | 109.9 | C17—C18—H18 | 180.0 |
| O3—C10—H10B | 109.9 | C18—C17—C16 | 179.1 (2) |
| C11—C10—H10B | 109.9 | C16—O6—C15 | 113.57 (15) |
| H10A—C10—H10B | 108.3 | C2—O1—C7 | 119.54 (13) |
| O4—C11—C10 | 110.25 (15) | C6—O3—C10 | 117.49 (13) |
| O4—C11—H11A | 109.6 | C11—O4—C12 | 112.09 (13) |
| C10—C11—H11A | 109.6 | C13—O5—C14 | 112.83 (14) |
| O4—C11—H11B | 109.6 | C8—O2—C9 | 112.47 (14) |
| C6—C1—C2—O1 | 177.94 (16) | C5—C4—C15—O6 | −55.4 (2) |
| C6—C1—C2—C3 | −1.3 (3) | O6—C16—C17—C18 | −90 (17) |
| O1—C2—C3—C4 | −178.87 (15) | C17—C16—O6—C15 | −69.0 (2) |
| C1—C2—C3—C4 | 0.4 (3) | C4—C15—O6—C16 | −64.9 (2) |
| C4—C5—C6—O3 | 177.64 (16) | C1—C2—O1—C7 | 13.2 (3) |
| C4—C5—C6—C1 | −1.0 (3) | C3—C2—O1—C7 | −167.59 (15) |
| C2—C1—C6—O3 | −177.18 (15) | C8—C7—O1—C2 | −178.61 (15) |
| C2—C1—C6—C5 | 1.5 (3) | C5—C6—O3—C10 | 4.2 (2) |
| O2—C8—C7—O1 | −67.06 (18) | C1—C6—O3—C10 | −177.17 (16) |
| O3—C10—C11—O4 | −67.2 (2) | C11—C10—O3—C6 | −176.06 (15) |
| O4—C12—C13—O5 | −57.51 (19) | C10—C11—O4—C12 | −167.39 (15) |
| C2—C3—C4—C5 | 0.2 (3) | C13—C12—O4—C11 | −168.70 (16) |
| C2—C3—C4—C15 | 179.74 (16) | C12—C13—O5—C14 | −169.02 (14) |
| C6—C5—C4—C3 | 0.1 (3) | C9i—C14—O5—C13 | −163.09 (15) |
| C6—C5—C4—C15 | −179.47 (16) | C7—C8—O2—C9 | 173.50 (14) |
| C3—C4—C15—O6 | 125.04 (18) | C14i—C9—O2—C8 | 173.71 (15) |
| H··· | ||||
| C13—H13B···O6ii | 0.97 | 2.49 | 3.247 (2) | 135. |
| C18—H18···O4iii | 0.93 | 2.54 | 3.203 (2) | 128. |
| C18—H18···O5iii | 0.93 | 2.52 | 3.431 (3) | 166. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C13—H13 | 0.97 | 2.49 | 3.247 (2) | 135 |
| C18—H18⋯O4ii | 0.93 | 2.54 | 3.203 (2) | 128 |
| C18—H18⋯O5ii | 0.93 | 2.52 | 3.431 (3) | 166 |
Symmetry codes: (i) ; (ii) .