Literature DB >> 22199721

N-(2-Aza-niumyleth-yl)carbamate monohydrate.

Bo Shao, Hai-Bin Wang.   

Abstract

In the crystal structure of the title compound, C(3)H(8)N(2)O(2)·H(2)O, the organic mol-ecule exists as zwitterion with the carboxyl group deprotonated and the amino group protonated. In the crystal, the components are linked by O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22199721      PMCID: PMC3238868          DOI: 10.1107/S1600536811044850

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

CO2 readily reacts with amines to yied carbamates, see: Brown & Gray (1982 ▶); Dell’Amico et al. (2003) ▶; Jing et al. (2007 ▶). For N-(2-ammonio­eth­yl)carbamate (AECM), a reactive product of ethyl­enediamine with CO2, see: Garbauskas et al. (1983 ▶); Antsyshkina et al. (2007 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C3H8N2O2·H2O M = 122.13 Monoclinic, a = 8.0301 (6) Å b = 8.7842 (7) Å c = 8.1748 (6) Å β = 98.889 (1)° V = 569.71 (7) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 293 K 0.35 × 0.34 × 0.30 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.945, T max = 0.966 2877 measured reflections 1002 independent reflections 960 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.093 S = 1.04 1002 reflections 82 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044850/nc2244sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044850/nc2244Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811044850/nc2244Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H8N2O2·H2OF(000) = 264.0
Mr = 122.13Dx = 1.424 Mg m3
Monoclinic, P21/cMelting point: 358 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.0301 (6) ÅCell parameters from 1358 reflections
b = 8.7842 (7) Åθ = 2.4–18.3°
c = 8.1748 (6) ŵ = 0.12 mm1
β = 98.889 (1)°T = 293 K
V = 569.71 (7) Å3Block, colorless
Z = 40.35 × 0.34 × 0.30 mm
Bruker APEX area-detector diffractometer1002 independent reflections
Radiation source: fine-focus sealed tube960 reflections with I > 2σ(I)
graphiteRint = 0.016
φ and ω scanθmax = 25.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→9
Tmin = 0.945, Tmax = 0.966k = −10→10
2877 measured reflectionsl = −9→6
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0545P)2 + 0.1863P] where P = (Fo2 + 2Fc2)/3
1002 reflections(Δ/σ)max < 0.001
82 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.79493 (17)0.47441 (13)0.42240 (14)0.0480 (4)
H3A0.788 (2)0.472 (2)0.326 (3)0.050 (5)*
H3B0.844 (3)0.391 (3)0.466 (3)0.069 (6)*
O20.91742 (12)0.29983 (10)0.06003 (11)0.0324 (3)
O10.75733 (13)0.50450 (10)0.08899 (11)0.0325 (3)
N10.82463 (13)0.69023 (12)−0.32825 (13)0.0270 (3)
H1D0.91100.6736−0.24800.041*
H1E0.82880.7855−0.36440.041*
H1C0.83030.6260−0.41140.041*
N20.76650 (14)0.40847 (12)−0.16430 (13)0.0265 (3)
H20.82160.3547−0.22570.032*
C30.81591 (15)0.40494 (13)0.00256 (15)0.0235 (3)
C20.62537 (16)0.49851 (15)−0.24347 (16)0.0280 (3)
H2A0.53400.4898−0.17900.034*
H2B0.58620.4560−0.35210.034*
C10.66425 (16)0.66607 (15)−0.26316 (16)0.0288 (3)
H1A0.57290.7126−0.33800.035*
H1B0.67090.7161−0.15660.035*
U11U22U33U12U13U23
O30.0844 (9)0.0333 (6)0.0250 (6)0.0148 (6)0.0046 (6)−0.0027 (5)
O20.0397 (5)0.0250 (5)0.0294 (5)0.0052 (4)−0.0050 (4)0.0000 (4)
O10.0459 (6)0.0274 (5)0.0252 (5)0.0038 (4)0.0084 (4)−0.0035 (4)
N10.0343 (6)0.0222 (5)0.0239 (5)−0.0015 (4)0.0022 (4)0.0029 (4)
N20.0349 (6)0.0236 (6)0.0213 (6)0.0056 (4)0.0050 (4)0.0001 (4)
C30.0279 (6)0.0183 (6)0.0243 (6)−0.0041 (5)0.0044 (5)0.0003 (5)
C20.0273 (6)0.0297 (7)0.0263 (7)−0.0017 (5)0.0018 (5)0.0038 (5)
C10.0316 (7)0.0263 (7)0.0283 (7)0.0062 (5)0.0036 (5)0.0023 (5)
O3—H3A0.78 (2)N2—C31.3608 (16)
O3—H3B0.88 (3)N2—C21.4499 (16)
O2—C31.2725 (15)N2—H20.8600
O1—C31.2603 (15)C2—C11.5184 (18)
N1—C11.4828 (16)C2—H2A0.9700
N1—H1D0.8900C2—H2B0.9700
N1—H1E0.8900C1—H1A0.9700
N1—H1C0.8900C1—H1B0.9700
H3A—O3—H3B110 (2)N2—C2—C1114.63 (10)
C1—N1—H1D109.5N2—C2—H2A108.6
C1—N1—H1E109.5C1—C2—H2A108.6
H1D—N1—H1E109.5N2—C2—H2B108.6
C1—N1—H1C109.5C1—C2—H2B108.6
H1D—N1—H1C109.5H2A—C2—H2B107.6
H1E—N1—H1C109.5N1—C1—C2112.39 (10)
C3—N2—C2123.13 (10)N1—C1—H1A109.1
C3—N2—H2118.4C2—C1—H1A109.1
C2—N2—H2118.4N1—C1—H1B109.1
O1—C3—O2124.74 (11)C2—C1—H1B109.1
O1—C3—N2118.03 (11)H1A—C1—H1B107.9
O2—C3—N2117.23 (11)
C2—N2—C3—O1−13.44 (17)C3—N2—C2—C179.98 (15)
C2—N2—C3—O2165.99 (11)N2—C2—C1—N146.09 (15)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O10.80 (3)1.92 (3)2.708 (2)170 (3)
O3—H3B···O2i0.86 (3)1.92 (3)2.773 (2)171 (3)
N1—H1C···O3ii0.891.892.767 (2)167.
N1—H1D···O2iii0.891.912.775 (2)163.
N1—H1E···O1iv0.891.952.798 (2)158.
N2—H2···O2v0.862.433.278 (2)167.
C2—H2A···O1vi0.972.563.499 (2)163.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O10.80 (3)1.92 (3)2.708 (2)170 (3)
O3—H3B⋯O2i0.86 (3)1.92 (3)2.773 (2)171 (3)
N1—H1C⋯O3ii0.891.892.767 (2)167
N1—H1D⋯O2iii0.891.912.775 (2)163
N1—H1E⋯O1iv0.891.952.798 (2)158
N2—H2⋯O2v0.862.433.278 (2)167
C2—H2A⋯O1vi0.972.563.499 (2)163

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  2 in total

Review 1.  Converting carbon dioxide into carbamato derivatives.

Authors:  Daniela Belli Dell'Amico; Fausto Calderazzo; Luca Labella; Fabio Marchetti; Guido Pampaloni
Journal:  Chem Rev       Date:  2003-10       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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