Literature DB >> 22199720

(E)-1-(4-Benzhydrylpiperazin-1-yl)-3-(2-eth-oxy-phen-yl)prop-2-en-1-one.

Yan Zhong, Xiaoping Zhang, Bin Wu.   

Abstract

In the title mol-ecule, C(28)H(30)N(2)O(2), the piperazine ring adopts a chair conformation and the C=C bond exhibits an E conformation. The dihedral angle between the terminal phenyl rings is 71.4 (2). In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds, forming [010] chains.

Entities:  

Year:  2011        PMID: 22199720      PMCID: PMC3238867          DOI: 10.1107/S1600536811045922

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For properties of cinnamic acid derivatives, see: Shi et al. (2005 ▶); Qian et al. (2010 ▶). For the synthesis, see: Wu et al. (2008 ▶). For related structures, see: Mouillé et al. (1975) ▶; Zhong et al. (2011 ▶).

Experimental

Crystal data

C28H30N2O2 M = 426.54 Monoclinic, a = 11.858 (2) Å b = 12.786 (3) Å c = 16.044 (3) Å β = 94.63 (3)° V = 2424.6 (8) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 4673 measured reflections 4446 independent reflections 2022 reflections with I > 2σ(I) R int = 0.063 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.077 wR(F 2) = 0.155 S = 1.00 4446 reflections 265 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXL97 (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811045922/hb6487sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811045922/hb6487Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811045922/hb6487Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H30N2O2F(000) = 912
Mr = 426.54Dx = 1.169 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 11.858 (2) Åθ = 9–12°
b = 12.786 (3) ŵ = 0.07 mm1
c = 16.044 (3) ÅT = 293 K
β = 94.63 (3)°Block, pale-yellow
V = 2424.6 (8) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometerRint = 0.063
Radiation source: fine-focus sealed tubeθmax = 25.4°, θmin = 2.0°
graphiteh = 0→14
ω/2θ scansk = 0→15
4673 measured reflectionsl = −19→19
4446 independent reflections3 standard reflections every 200 reflections
2022 reflections with I > 2σ(I) intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.077Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.155H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.030P)2 + 1.550P] where P = (Fo2 + 2Fc2)/3
4446 reflections(Δ/σ)max < 0.001
265 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.2436 (2)0.32431 (17)0.49193 (13)0.0823 (8)
N10.2112 (2)0.69070 (19)0.57757 (17)0.0641 (7)
C10.0062 (5)0.7832 (3)0.6573 (3)0.1159 (15)
H1A−0.00140.77390.59960.139*
C2−0.0941 (4)0.7913 (3)0.6932 (3)0.103
H2A−0.16710.78730.66740.124*
C3−0.0616 (5)0.8068 (3)0.7764 (3)0.1158 (15)
H3A−0.12330.82180.80670.139*
C40.0365 (5)0.8061 (4)0.8263 (3)0.1107 (15)
H4A0.03960.81350.88410.133*
C50.1251 (5)0.7940 (3)0.7854 (4)0.1213 (16)
H5A0.19620.79010.81420.146*
C60.1140 (4)0.7863 (3)0.6906 (4)0.1098 (17)
O20.3846 (2)0.12578 (18)0.28272 (15)0.0852 (8)
N20.2698 (3)0.4974 (2)0.50411 (17)0.0790 (9)
C70.2064 (3)0.7757 (3)0.6338 (3)0.095
H7A0.27520.76840.67150.114*
C80.2259 (4)0.8738 (3)0.5848 (3)0.1061 (14)
C90.3187 (3)0.9292 (3)0.6198 (2)0.084
H9A0.36180.90340.66630.100*
C100.3444 (4)1.0185 (3)0.5861 (3)0.097
H10A0.41501.04580.60400.117*
C110.2883 (5)1.0710 (4)0.5344 (3)0.1141 (15)
H11A0.31011.13870.52210.137*
C120.1862 (5)1.0252 (5)0.4921 (3)0.1197 (17)
H12A0.14421.05970.44900.144*
C130.1550 (4)0.9251 (5)0.5206 (3)0.1267 (17)
H13A0.08910.89300.49790.152*
C140.2828 (3)0.6824 (3)0.5164 (3)0.1075 (15)
H14A0.35130.71810.53770.129*
H14B0.24980.72490.47070.129*
C150.3189 (4)0.5913 (3)0.4794 (3)0.1085 (15)
H15A0.40020.58590.49120.130*
H15B0.30410.59810.41930.130*
C160.1949 (4)0.4975 (3)0.5695 (3)0.1160 (16)
H16A0.12770.45800.55080.139*
H16B0.23150.46140.61750.139*
C170.1613 (4)0.5974 (3)0.5953 (3)0.1131 (16)
H17A0.08230.60430.57490.136*
H17B0.16270.59410.65570.136*
C180.2861 (3)0.4023 (3)0.4683 (2)0.0757 (11)
C190.3575 (3)0.4008 (2)0.39672 (19)0.0670 (9)
H19A0.38940.46280.37970.080*
C200.3765 (3)0.3152 (2)0.35741 (18)0.0720 (10)
H20A0.34530.25500.37860.086*
C210.4405 (3)0.3001 (3)0.28366 (19)0.0637 (9)
C220.4967 (3)0.3810 (3)0.2482 (2)0.0733 (10)
H22A0.49230.44760.27110.088*
C230.5596 (3)0.3673 (3)0.1799 (2)0.0918 (13)
H23A0.59810.42320.15840.110*
C240.5641 (3)0.2701 (3)0.1446 (2)0.0873 (12)
H24A0.60810.25900.10000.105*
C250.5004 (3)0.1846 (3)0.1769 (2)0.0829 (11)
H25A0.49890.11990.15040.100*
C260.4417 (3)0.1990 (3)0.2469 (2)0.0721 (10)
C270.3835 (3)0.0218 (3)0.2493 (2)0.0919 (12)
H27A0.4600−0.00520.25050.110*
H27B0.35160.02230.19170.110*
C280.3142 (3)−0.0455 (3)0.3005 (3)0.1021 (13)
H28A0.3140−0.11580.27940.153*
H28B0.2381−0.01940.29770.153*
H28C0.3457−0.04490.35750.153*
U11U22U33U12U13U23
O10.129 (2)0.0544 (14)0.0689 (15)−0.0102 (14)0.0430 (14)−0.0047 (12)
N10.0595 (18)0.0530 (16)0.0809 (19)0.0014 (14)0.0131 (15)−0.0082 (15)
C10.119 (4)0.121 (4)0.111 (4)−0.025 (3)0.028 (3)0.009 (3)
C20.1030.1030.1030.0000.0080.000
C30.128 (4)0.102 (3)0.120 (4)0.010 (3)0.024 (3)−0.005 (3)
C40.114 (4)0.110 (4)0.110 (4)0.029 (3)0.024 (3)−0.014 (3)
C50.112 (4)0.097 (3)0.153 (5)0.016 (3)0.003 (4)−0.006 (3)
C60.102 (4)0.077 (3)0.162 (5)0.004 (3)0.080 (4)−0.032 (3)
O20.104 (2)0.0662 (15)0.0907 (18)0.0147 (14)0.0390 (15)−0.0212 (14)
N20.113 (2)0.0495 (16)0.081 (2)−0.0052 (16)0.0478 (18)−0.0007 (15)
C70.0950.0950.0950.0000.0080.000
C80.107 (4)0.090 (3)0.125 (4)−0.007 (3)0.032 (3)−0.010 (3)
C90.0840.0840.0840.0000.0070.000
C100.0970.0970.0970.0000.0080.000
C110.137 (4)0.088 (3)0.120 (4)0.009 (3)0.029 (3)0.013 (3)
C120.124 (5)0.146 (5)0.090 (3)0.046 (4)0.011 (3)−0.005 (4)
C130.113 (4)0.154 (5)0.114 (4)−0.005 (4)0.019 (3)−0.032 (4)
C140.104 (3)0.066 (2)0.162 (4)−0.023 (2)0.068 (3)−0.001 (3)
C150.153 (4)0.074 (3)0.108 (3)−0.016 (3)0.067 (3)−0.019 (3)
C160.171 (4)0.079 (3)0.110 (3)−0.009 (3)0.085 (3)−0.013 (2)
C170.136 (4)0.072 (3)0.143 (4)−0.006 (3)0.088 (3)−0.010 (3)
C180.098 (3)0.059 (2)0.076 (2)0.006 (2)0.047 (2)−0.0040 (19)
C190.084 (2)0.0472 (18)0.075 (2)0.0158 (17)0.0369 (19)0.0063 (17)
C200.114 (3)0.0499 (19)0.057 (2)0.0050 (19)0.039 (2)0.0019 (16)
C210.064 (2)0.068 (2)0.061 (2)0.0222 (18)0.0102 (17)0.0044 (18)
C220.094 (3)0.063 (2)0.066 (2)0.023 (2)0.024 (2)0.0038 (18)
C230.137 (4)0.080 (3)0.065 (2)0.000 (3)0.046 (2)0.007 (2)
C240.090 (3)0.112 (3)0.065 (2)0.012 (3)0.034 (2)0.005 (2)
C250.070 (2)0.101 (3)0.082 (3)0.024 (2)0.030 (2)−0.011 (2)
C260.074 (3)0.075 (2)0.069 (2)0.016 (2)0.013 (2)0.003 (2)
C270.097 (3)0.093 (3)0.087 (3)0.018 (2)0.014 (2)−0.037 (2)
C280.097 (3)0.083 (3)0.129 (4)0.014 (2)0.027 (3)−0.017 (3)
O1—C181.194 (4)C13—H13A0.9300
N1—C141.352 (4)C14—C151.391 (4)
N1—C171.372 (4)C14—H14A0.9700
N1—C71.416 (4)C14—H14B0.9700
C1—C61.347 (6)C15—H15A0.9700
C1—C21.367 (6)C15—H15B0.9700
C1—H1A0.9300C16—C171.410 (5)
C2—C31.373 (6)C16—H16A0.9700
C2—H2A0.9300C16—H16B0.9700
C3—C41.357 (6)C17—H17A0.9700
C3—H3A0.9300C17—H17B0.9700
C4—C51.292 (6)C18—C191.480 (4)
C4—H4A0.9300C19—C201.291 (4)
C5—C61.519 (6)C19—H19A0.9300
C5—H5A0.9300C20—C211.470 (4)
C6—C71.487 (5)C20—H20A0.9300
O2—C261.315 (4)C21—C221.378 (4)
O2—C271.434 (4)C21—C261.421 (4)
N2—C181.366 (4)C22—C231.385 (4)
N2—C151.405 (4)C22—H22A0.9300
N2—C161.428 (4)C23—C241.368 (5)
C7—C81.508 (6)C23—H23A0.9300
C7—H7A0.9800C24—C251.449 (5)
C8—C91.389 (5)C24—H24A0.9300
C8—C131.435 (6)C25—C261.380 (4)
C9—C101.310 (5)C25—H25A0.9300
C9—H9A0.9300C27—C281.482 (5)
C10—C111.222 (5)C27—H27A0.9700
C10—H10A0.9300C27—H27B0.9700
C11—C121.461 (6)C28—H28A0.9600
C11—H11A0.9300C28—H28B0.9600
C12—C131.419 (6)C28—H28C0.9600
C12—H12A0.9300
C14—N1—C17112.8 (3)C14—C15—H15A108.2
C14—N1—C7125.6 (3)N2—C15—H15A108.2
C17—N1—C7119.7 (3)C14—C15—H15B108.2
C6—C1—C2131.4 (5)N2—C15—H15B108.2
C6—C1—H1A114.3H15A—C15—H15B107.3
C2—C1—H1A114.3C17—C16—N2115.1 (3)
C1—C2—C3103.6 (4)C17—C16—H16A108.5
C1—C2—H2A128.2N2—C16—H16A108.5
C3—C2—H2A128.2C17—C16—H16B108.5
C4—C3—C2137.0 (5)N2—C16—H16B108.5
C4—C3—H3A111.5H16A—C16—H16B107.5
C2—C3—H3A111.5N1—C17—C16126.2 (3)
C5—C4—C3113.3 (5)N1—C17—H17A105.8
C5—C4—H4A123.4C16—C17—H17A105.8
C3—C4—H4A123.4N1—C17—H17B105.8
C4—C5—C6120.5 (5)C16—C17—H17B105.8
C4—C5—H5A119.7H17A—C17—H17B106.2
C6—C5—H5A119.7O1—C18—N2122.2 (3)
C1—C6—C7118.5 (5)O1—C18—C19121.2 (3)
C1—C6—C5113.7 (4)N2—C18—C19116.6 (3)
C7—C6—C5127.7 (5)C20—C19—C18121.6 (3)
C26—O2—C27119.1 (3)C20—C19—H19A119.2
C18—N2—C15124.4 (3)C18—C19—H19A119.2
C18—N2—C16115.3 (3)C19—C20—C21128.8 (3)
C15—N2—C16120.2 (3)C19—C20—H20A115.6
N1—C7—C6122.0 (4)C21—C20—H20A115.6
N1—C7—C8106.9 (3)C22—C21—C26119.4 (3)
C6—C7—C8113.3 (4)C22—C21—C20122.1 (3)
N1—C7—H7A104.3C26—C21—C20118.5 (3)
C6—C7—H7A104.3C21—C22—C23122.7 (3)
C8—C7—H7A104.3C21—C22—H22A118.7
C9—C8—C13117.2 (4)C23—C22—H22A118.7
C9—C8—C7111.3 (5)C24—C23—C22119.0 (3)
C13—C8—C7130.4 (5)C24—C23—H23A120.5
C10—C9—C8118.7 (4)C22—C23—H23A120.5
C10—C9—H9A120.6C23—C24—C25119.9 (3)
C8—C9—H9A120.6C23—C24—H24A120.1
C11—C10—C9128.8 (5)C25—C24—H24A120.1
C11—C10—H10A115.6C26—C25—C24120.1 (3)
C9—C10—H10A115.6C26—C25—H25A119.9
C10—C11—C12118.8 (5)C24—C25—H25A119.9
C10—C11—H11A120.6O2—C26—C25124.9 (3)
C12—C11—H11A120.6O2—C26—C21116.3 (3)
C13—C12—C11116.0 (5)C25—C26—C21118.8 (3)
C13—C12—H12A122.0O2—C27—C28108.6 (3)
C11—C12—H12A122.0O2—C27—H27A110.0
C12—C13—C8119.4 (5)C28—C27—H27A110.0
C12—C13—H13A120.3O2—C27—H27B110.0
C8—C13—H13A120.3C28—C27—H27B110.0
N1—C14—C15127.5 (3)H27A—C27—H27B108.3
N1—C14—H14A105.4C27—C28—H28A109.5
C15—C14—H14A105.4C27—C28—H28B109.5
N1—C14—H14B105.4H28A—C28—H28B109.5
C15—C14—H14B105.4C27—C28—H28C109.5
H14A—C14—H14B106.0H28A—C28—H28C109.5
C14—C15—N2116.4 (3)H28B—C28—H28C109.5
C6—C1—C2—C31.4 (7)C18—N2—C15—C14172.9 (4)
C1—C2—C3—C4−7.1 (8)C16—N2—C15—C14−5.5 (6)
C2—C3—C4—C55.4 (9)C18—N2—C16—C17−168.4 (4)
C3—C4—C5—C62.2 (7)C15—N2—C16—C1710.1 (6)
C2—C1—C6—C7−179.6 (4)C14—N1—C17—C1613.8 (7)
C2—C1—C6—C54.0 (8)C7—N1—C17—C16−151.5 (5)
C4—C5—C6—C1−5.9 (7)N2—C16—C17—N1−15.2 (8)
C4—C5—C6—C7178.0 (4)C15—N2—C18—O1179.2 (4)
C14—N1—C7—C6170.6 (4)C16—N2—C18—O1−2.4 (6)
C17—N1—C7—C6−26.1 (6)C15—N2—C18—C19−2.2 (6)
C14—N1—C7—C838.0 (5)C16—N2—C18—C19176.2 (3)
C17—N1—C7—C8−158.7 (4)O1—C18—C19—C20−0.1 (6)
C1—C6—C7—N1−53.6 (6)N2—C18—C19—C20−178.7 (4)
C5—C6—C7—N1122.3 (5)C18—C19—C20—C21177.2 (3)
C1—C6—C7—C876.4 (5)C19—C20—C21—C223.7 (6)
C5—C6—C7—C8−107.7 (5)C19—C20—C21—C26−174.7 (4)
N1—C7—C8—C9−122.0 (4)C26—C21—C22—C23−3.2 (5)
C6—C7—C8—C9100.8 (5)C20—C21—C22—C23178.5 (3)
N1—C7—C8—C1370.4 (6)C21—C22—C23—C241.7 (6)
C6—C7—C8—C13−66.7 (6)C22—C23—C24—C252.3 (6)
C13—C8—C9—C10−8.2 (6)C23—C24—C25—C26−4.7 (6)
C7—C8—C9—C10−177.6 (3)C27—O2—C26—C251.5 (5)
C8—C9—C10—C1112.5 (7)C27—O2—C26—C21−179.3 (3)
C9—C10—C11—C12−10.9 (7)C24—C25—C26—O2−177.6 (3)
C10—C11—C12—C135.5 (7)C24—C25—C26—C213.2 (5)
C11—C12—C13—C8−2.8 (6)C22—C21—C26—O2−178.7 (3)
C9—C8—C13—C124.3 (6)C20—C21—C26—O2−0.2 (5)
C7—C8—C13—C12171.3 (4)C22—C21—C26—C250.6 (5)
C17—N1—C14—C15−8.2 (7)C20—C21—C26—C25179.1 (3)
C7—N1—C14—C15156.1 (5)C26—O2—C27—C28179.8 (3)
N1—C14—C15—N24.7 (8)
D—H···AD—HH···AD···AD—H···A
C11—H11A···O1i0.932.543.343 (6)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11A⋯O1i0.932.543.343 (6)146

Symmetry code: (i) .

  3 in total

1.  Synthesis, molecular modeling, and biological evaluation of cinnamic acid metronidazole ester derivatives as novel anticancer agents.

Authors:  Yong Qian; Hong-Jia Zhang; Hao Zhang; Chen Xu; Jing Zhao; Hai-Liang Zhu
Journal:  Bioorg Med Chem       Date:  2010-06-08       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  (E)-1-(4-Benzhydrylpiperazin-1-yl)-3-(3,4-dieth-oxy-phen-yl)prop-2-en-1-one ethanol monosolvate.

Authors:  Yan Zhong; Bin Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.