Literature DB >> 22199657

Poly[[aqua-(μ(5)-3,4,5,6-tetra-carb-oxy-cyclo-hexane-1,2-dicarboxyl-ato)strontium] monohydrate].

Pei-Chi Cheng, Jun-Xiang Zhan, Cheng-You Wu, Chia-Her Lin.   

Abstract

In the title compound, {[Sr(C(12)H(10)O(12))(H(2)O)]·H(2)O}(n), the Sr(II) ion is coordinated by six O atoms of five symmetry-related 3,4,5,6-tetra-carb-oxy-cyclo-hexane-1,2-dicarboxyl-ate ligands and one water mol-ecule in a slightly distorted monocapped trigonal-prismatic environment. The ligands bridge the Sr(II) ions, forming a two-dimensional structure. In the crystal, O-H⋯O hydrogen bonds further connect the structure into a three-dimensional network. The H atoms of two of the carboxyl groups were refined as half-occupancy.

Entities:  

Year:  2011        PMID: 22199657      PMCID: PMC3238780          DOI: 10.1107/S1600536811050811

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to coordination polymers, see: Liu et al. (2009 ▶); Liang et al. (2011 ▶); Kitagawa et al. (2004 ▶); Jiang & Xu (2011 ▶). For details of compounds based on cyclo­hexane-1,2,3,4,5,6-hexacarboxylic acid, see: Canadillas-Delgado et al. (2010 ▶). For related structures, see: Che et al. (2006 ▶); Yu et al. (2007 ▶); Chen & Meng (2010 ▶).

Experimental

Crystal data

[Sr(C12H10O12)(H2O)]·H2O M = 469.85 Triclinic, a = 6.1583 (3) Å b = 9.4491 (3) Å c = 13.6710 (5) Å α = 77.614 (2)° β = 80.746 (2)° γ = 77.041 (2)° V = 751.89 (5) Å3 Z = 2 Mo Kα radiation μ = 3.67 mm−1 T = 296 K 0.15 × 0.12 × 0.10 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2010 ▶) T min = 0.609, T max = 0.710 8798 measured reflections 3616 independent reflections 3184 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.065 S = 1.04 3616 reflections 244 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.55 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2010 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811050811/lh5373sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050811/lh5373Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sr(C12H10O12)(H2O)]·H2OZ = 2
Mr = 469.85F(000) = 472
Triclinic, P1Dx = 2.075 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.1583 (3) ÅCell parameters from 5438 reflections
b = 9.4491 (3) Åθ = 2.5–28.4°
c = 13.6710 (5) ŵ = 3.67 mm1
α = 77.614 (2)°T = 296 K
β = 80.746 (2)°Columnar, colourless
γ = 77.041 (2)°0.15 × 0.12 × 0.10 mm
V = 751.89 (5) Å3
Bruker APEXII CCD diffractometer3616 independent reflections
Radiation source: fine-focus sealed tube3184 reflections with I > 2σ(I)
graphiteRint = 0.027
Detector resolution: 8.3333 pixels mm-1θmax = 28.4°, θmin = 1.5°
φ and ω scansh = −7→7
Absorption correction: multi-scan (SADABS; Bruker, 2010)k = −12→12
Tmin = 0.609, Tmax = 0.710l = −18→18
8798 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0333P)2 + 0.1009P] where P = (Fo2 + 2Fc2)/3
3616 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.55 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Sr11.02988 (3)0.31958 (2)0.409253 (15)0.01534 (7)
O10.7024 (3)0.53526 (16)0.41114 (12)0.0235 (4)
O20.3026 (3)1.24350 (16)0.26117 (12)0.0216 (4)
O30.1971 (3)0.78708 (16)0.43110 (12)0.0226 (4)
O40.1356 (3)1.02924 (16)0.42401 (12)0.0221 (4)
H4A0.05591.01010.47720.033*0.50
O50.3286 (3)0.50144 (16)0.36308 (12)0.0246 (4)
H110.44810.49830.38330.037*
O60.7105 (3)0.74239 (18)0.46176 (13)0.0294 (4)
O70.1292 (3)0.63238 (18)0.24436 (13)0.0276 (4)
O8−0.0422 (3)0.90185 (17)0.09955 (12)0.0233 (4)
H70.05020.86450.05740.035*
O90.5394 (3)0.56570 (17)0.06154 (13)0.0264 (4)
H9A0.52480.52750.01510.025*0.50
O100.1959 (3)1.22482 (17)0.11758 (13)0.0273 (4)
H90.12821.30950.12000.041*
O11−0.0412 (3)0.98476 (18)0.23773 (13)0.0250 (4)
O120.2765 (3)0.7502 (2)−0.00060 (14)0.0360 (5)
O130.7610 (3)0.2429 (2)0.31616 (18)0.0494 (6)
H13A0.81480.16260.29480.074*
H13B0.62530.26560.30390.074*
C10.2938 (4)1.1700 (2)0.19893 (16)0.0150 (4)
C20.4656 (4)0.7781 (2)0.13407 (15)0.0130 (4)
H20.61440.79970.10720.016*
C30.2404 (4)0.9094 (2)0.39319 (15)0.0142 (4)
C40.5861 (4)0.7676 (2)0.30273 (15)0.0125 (4)
H50.72440.79070.26210.015*
C50.4433 (3)0.9213 (2)0.31267 (15)0.0121 (4)
H10.53840.97160.33870.015*
C60.4077 (3)1.0093 (2)0.20485 (15)0.0125 (4)
H60.56041.01400.17220.015*
C70.3150 (4)0.9317 (2)0.13770 (15)0.0132 (4)
H40.33480.98920.06930.016*
C80.0628 (4)0.9391 (2)0.16407 (16)0.0164 (4)
C90.4994 (4)0.6810 (2)0.23850 (15)0.0137 (4)
H30.62450.59980.22600.016*
C100.3007 (4)0.6079 (2)0.28292 (16)0.0173 (5)
C110.6685 (4)0.6760 (2)0.40099 (16)0.0162 (4)
C120.4151 (4)0.6951 (2)0.05943 (17)0.0198 (5)
O1W0.9816 (4)0.4880 (2)0.11301 (19)0.0547 (6)
H1WA0.85830.49740.08970.082*
H1WB1.02080.55030.13980.082*
U11U22U33U12U13U23
Sr10.01520 (12)0.01490 (10)0.01647 (11)−0.00211 (7)−0.00322 (7)−0.00400 (7)
O10.0279 (10)0.0149 (7)0.0235 (9)0.0039 (6)−0.0068 (7)−0.0004 (6)
O20.0268 (10)0.0165 (7)0.0224 (8)−0.0022 (6)−0.0029 (7)−0.0078 (6)
O30.0235 (9)0.0176 (7)0.0239 (8)−0.0062 (7)0.0073 (7)−0.0030 (6)
O40.0257 (10)0.0160 (7)0.0210 (8)−0.0014 (6)0.0082 (7)−0.0066 (6)
O50.0317 (10)0.0218 (8)0.0235 (9)−0.0150 (7)−0.0070 (7)0.0020 (6)
O60.0419 (12)0.0280 (9)0.0238 (9)−0.0112 (8)−0.0203 (8)−0.0004 (7)
O70.0199 (10)0.0337 (9)0.0324 (10)−0.0093 (7)−0.0059 (8)−0.0067 (7)
O80.0179 (9)0.0312 (9)0.0231 (9)−0.0029 (7)−0.0061 (7)−0.0090 (7)
O90.0321 (11)0.0214 (8)0.0297 (9)0.0048 (7)−0.0133 (7)−0.0164 (7)
O100.0382 (11)0.0152 (7)0.0274 (9)0.0043 (7)−0.0144 (8)−0.0039 (7)
O110.0172 (9)0.0312 (9)0.0285 (9)−0.0048 (7)0.0031 (7)−0.0138 (7)
O120.0388 (12)0.0400 (10)0.0320 (10)0.0139 (9)−0.0240 (9)−0.0210 (8)
O130.0267 (12)0.0530 (13)0.0824 (17)0.0043 (9)−0.0197 (11)−0.0454 (12)
C10.0118 (11)0.0153 (9)0.0168 (10)−0.0035 (8)0.0013 (8)−0.0018 (8)
C20.0145 (11)0.0127 (9)0.0115 (9)−0.0004 (8)−0.0019 (8)−0.0035 (7)
C30.0125 (11)0.0169 (9)0.0131 (10)−0.0012 (8)−0.0024 (8)−0.0035 (8)
C40.0124 (11)0.0117 (9)0.0137 (10)−0.0016 (8)−0.0025 (8)−0.0030 (7)
C50.0103 (11)0.0122 (9)0.0146 (10)−0.0022 (7)−0.0020 (8)−0.0037 (7)
C60.0102 (11)0.0134 (9)0.0130 (10)−0.0015 (8)−0.0005 (8)−0.0020 (7)
C70.0151 (12)0.0132 (9)0.0116 (9)−0.0030 (8)−0.0017 (8)−0.0025 (7)
C80.0166 (12)0.0137 (9)0.0178 (11)−0.0010 (8)−0.0041 (9)−0.0012 (8)
C90.0133 (11)0.0141 (9)0.0136 (10)−0.0018 (8)0.0000 (8)−0.0046 (7)
C100.0228 (13)0.0142 (9)0.0169 (11)−0.0058 (9)−0.0012 (9)−0.0056 (8)
C110.0115 (11)0.0194 (10)0.0167 (10)−0.0016 (8)−0.0036 (8)−0.0012 (8)
C120.0210 (13)0.0241 (11)0.0161 (11)−0.0028 (9)−0.0019 (9)−0.0098 (9)
O1W0.0434 (14)0.0313 (11)0.0981 (19)0.0114 (9)−0.0392 (13)−0.0280 (11)
Sr1—O6i2.4601 (17)O10—H90.8200
Sr1—O12.5267 (15)O11—C81.210 (3)
Sr1—O2ii2.5348 (15)O12—C121.231 (3)
Sr1—O3iii2.5378 (14)O13—H13A0.8499
Sr1—O132.549 (2)O13—H13B0.8497
Sr1—O4ii2.6448 (14)C1—C61.513 (3)
Sr1—O5iv2.7043 (15)C2—C121.519 (3)
O1—C111.280 (2)C2—C91.540 (3)
O2—C11.223 (3)C2—C71.543 (3)
O2—Sr1v2.5348 (15)C2—H20.9800
O3—C31.229 (2)C3—C51.534 (3)
O3—Sr1iii2.5378 (14)C4—C111.528 (3)
O4—C31.291 (2)C4—C51.541 (3)
O4—Sr1v2.6448 (14)C4—C91.543 (3)
O4—H4A0.8194C4—H50.9800
O5—C101.324 (3)C5—C61.552 (3)
O5—Sr1vi2.7043 (15)C5—H10.9800
O5—H110.8197C6—C71.534 (3)
O6—C111.231 (3)C6—H60.9800
O6—Sr1i2.4600 (17)C7—C81.526 (3)
O7—C101.210 (3)C7—H40.9800
O8—C81.319 (3)C9—C101.518 (3)
O8—H70.8199C9—H30.9800
O9—C121.286 (3)O1W—H1WA0.8494
O9—H9A0.8204O1W—H1WB0.8507
O10—C11.303 (3)
O6i—Sr1—O1120.71 (6)C12—C2—H2104.0
O6i—Sr1—O2ii99.27 (6)C9—C2—H2104.0
O1—Sr1—O2ii129.08 (5)C7—C2—H2104.0
O6i—Sr1—O3iii75.76 (6)O3—C3—O4123.21 (19)
O1—Sr1—O3iii82.17 (5)O3—C3—C5119.48 (18)
O2ii—Sr1—O3iii141.73 (5)O4—C3—C5117.00 (17)
O6i—Sr1—O13149.80 (7)C11—C4—C5114.33 (16)
O1—Sr1—O1378.85 (6)C11—C4—C9114.86 (16)
O2ii—Sr1—O1380.94 (6)C5—C4—C9115.82 (18)
O3iii—Sr1—O1385.48 (7)C11—C4—H5103.1
O6i—Sr1—O4ii80.20 (5)C5—C4—H5103.1
O1—Sr1—O4ii143.19 (5)C9—C4—H5103.1
O2ii—Sr1—O4ii67.90 (5)C3—C5—C4111.23 (15)
O3iii—Sr1—O4ii73.88 (5)C3—C5—C6119.73 (18)
O13—Sr1—O4ii71.87 (6)C4—C5—C6107.85 (15)
O6i—Sr1—O5iv69.92 (5)C3—C5—H1105.7
O1—Sr1—O5iv91.80 (5)C4—C5—H1105.7
O2ii—Sr1—O5iv72.48 (5)C6—C5—H1105.7
O3iii—Sr1—O5iv135.64 (5)C1—C6—C7112.61 (18)
O13—Sr1—O5iv136.54 (7)C1—C6—C5115.32 (16)
O4ii—Sr1—O5iv124.84 (5)C7—C6—C5115.75 (16)
O6i—Sr1—Sr1i65.88 (4)C1—C6—H6103.7
O1—Sr1—Sr1i56.51 (4)C7—C6—H6103.7
O2ii—Sr1—Sr1i132.72 (4)C5—C6—H6103.7
O3iii—Sr1—Sr1i80.63 (3)C8—C7—C6111.99 (16)
O13—Sr1—Sr1i134.51 (4)C8—C7—C2117.48 (16)
O4ii—Sr1—Sr1i141.65 (4)C6—C7—C2109.12 (18)
O5iv—Sr1—Sr1i60.24 (3)C8—C7—H4105.8
C11—O1—Sr1138.52 (15)C6—C7—H4105.8
C1—O2—Sr1v132.64 (14)C2—C7—H4105.8
C3—O3—Sr1iii135.56 (13)O11—C8—O8120.5 (2)
C3—O4—Sr1v153.52 (13)O11—C8—C7122.3 (2)
C3—O4—H4A110.5O8—C8—C7117.08 (18)
Sr1v—O4—H4A95.9C10—C9—C2111.94 (19)
C10—O5—Sr1vi116.67 (14)C10—C9—C4119.05 (16)
C10—O5—H11109.5C2—C9—C4108.95 (16)
Sr1vi—O5—H11133.1C10—C9—H3105.2
C11—O6—Sr1i134.49 (15)C2—C9—H3105.2
C8—O8—H7109.5C4—C9—H3105.2
C12—O9—H9A112.4O7—C10—O5119.0 (2)
C1—O10—H9109.5O7—C10—C9123.8 (2)
Sr1—O13—H13A113.5O5—C10—C9116.8 (2)
Sr1—O13—H13B140.9O6—C11—O1124.7 (2)
H13A—O13—H13B105.1O6—C11—C4117.76 (18)
O2—C1—O10123.08 (19)O1—C11—C4117.38 (18)
O2—C1—C6123.6 (2)O12—C12—O9123.6 (2)
O10—C1—C6113.16 (18)O12—C12—C2122.80 (19)
C12—C2—C9113.13 (16)O9—C12—C2113.5 (2)
C12—C2—C7115.66 (19)H1WA—O1W—H1WB126.9
C9—C2—C7114.16 (16)
D—H···AD—HH···AD···AD—H···A
O4—H4A···O4vii0.821.682.493 (3)172.
O5—H11···O10.821.792.596 (2)167.
O8—H7···O120.821.752.549 (2)163.
O9—H9A···O9viii0.821.652.457 (3)168.6
O10—H9···O1Wv0.821.722.533 (2)174.
O13—H13A···O11ii0.851.972.820 (2)175.
O13—H13B···O2ix0.852.223.035 (3)160.
O1W—H1WB···O7iv0.852.032.836 (3)159.
O1W—H1WB···O7iv0.852.032.836 (3)159.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4A⋯O4i0.821.682.493 (3)172
O5—H11⋯O10.821.792.596 (2)167
O8—H7⋯O120.821.752.549 (2)163
O9—H9A⋯O9ii0.821.652.457 (3)168.6
O10—H9⋯O1Wiii0.821.722.533 (2)174
O13—H13A⋯O11iv0.851.972.820 (2)175
O13—H13B⋯O2v0.852.223.035 (3)160
O1W—H1WB⋯O7vi0.852.032.836 (3)159
O1W—H1WB⋯O7vi0.852.032.836 (3)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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