Literature DB >> 22199533

catena-Poly[[[bis-(methanol-κO)lead(II)]-μ-N'-[1-(pyridin-2-yl-κN)ethyl-idene]isonicotinohydrazidato-κN',O:N] perchlorate].

Gholam Hossein Shahverdizadeh, Edward R T Tiekink, Babak Mirtamizdoust.   

Abstract

The Pb(II) atom in the polymeric title compound, {[Pb(C(13)H(11)N(4)O)(CH(3)OH)(2)]ClO(4)}(n), is coordinated by an N'-[1-(pyridin-2-yl-κN)ethyl-idene]isonicotinohydrazidate ligand via O,N,N'-donors and simultaneously bridged by a neighbouring ligand via the isonicotinoyl N atom; two additional sites are occupied by methanol O atoms. The resultant supra-molecular chain is a zigzag along the c axis. The Pb(II) atom is seven-coordinated within an N(3)O(3) donor set and a lone pair of electrons, which defines a Ψ-pentagonal-bipyramidal coordination geometry with the pyridine N and lone pair in axial positions. The supra-molecular chains are linked into the two-dimensional array via inter-molecular Pb⋯N [3.020 (4) Å] inter-actions. Layers stack along the a axis, being connected by O-H⋯O hydrogen bonds formed between the coordinated methanol mol-ecules and perchlorate anions.

Entities:  

Year:  2011        PMID: 22199533      PMCID: PMC3238642          DOI: 10.1107/S1600536811046769

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of metal complexes containing the N′-[1-(2-pyrid­yl)ethyl­idene]isonicotinohydrazide ligand, see: Maurya et al. (2002 ▶); Abboud et al. (2007 ▶); Zhang & Liu (2009 ▶); Hao et al. (2010 ▶); Shahverdizadeh et al. (2011 ▶). For specialized crystallization techniques, see: Harrowfield et al. (1996 ▶).

Experimental

Crystal data

[Pb(C13H11N4O)(CH4O)2]ClO4 M = 609.98 Monoclinic, a = 11.2122 (14) Å b = 13.4644 (17) Å c = 14.1451 (18) Å β = 111.906 (2)° V = 1981.2 (4) Å3 Z = 4 Mo Kα radiation μ = 8.70 mm−1 T = 173 K 0.46 × 0.43 × 0.37 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.108, T max = 0.141 10367 measured reflections 3492 independent reflections 2641 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.066 S = 1.05 3492 reflections 255 parameters H-atom parameters constrained Δρmax = 0.97 e Å−3 Δρmin = −0.98 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811046769/hg5133sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811046769/hg5133Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pb(C13H11N4O)(CH4O)2]ClO4F(000) = 1168
Mr = 609.98Dx = 2.045 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4546 reflections
a = 11.2122 (14) Åθ = 2.2–25.0°
b = 13.4644 (17) ŵ = 8.70 mm1
c = 14.1451 (18) ÅT = 173 K
β = 111.906 (2)°Prism, yellow
V = 1981.2 (4) Å30.46 × 0.43 × 0.37 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3492 independent reflections
Radiation source: fine-focus sealed tube2641 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→8
Tmin = 0.108, Tmax = 0.141k = −16→15
10367 measured reflectionsl = −12→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.066H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0282P)2 + 6.1832P] where P = (Fo2 + 2Fc2)/3
3492 reflections(Δ/σ)max = 0.001
255 parametersΔρmax = 0.97 e Å3
0 restraintsΔρmin = −0.98 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pb0.379666 (16)0.502370 (14)0.303341 (13)0.01308 (8)
Cl1−0.07646 (14)0.25586 (11)0.34029 (12)0.0297 (3)
O10.3551 (3)0.3685 (3)0.4082 (3)0.0160 (8)
O20.1391 (4)0.4209 (3)0.2361 (3)0.0304 (10)
H2O0.13670.36780.26660.037*
O30.2933 (5)0.5804 (4)0.0983 (3)0.0449 (12)
H3O0.23990.62620.09160.054*
O40.0480 (5)0.2805 (5)0.3505 (4)0.080 (2)
O5−0.0732 (6)0.2110 (5)0.4315 (4)0.081 (2)
O6−0.1531 (6)0.3419 (5)0.3194 (5)0.088 (2)
O7−0.1306 (6)0.1904 (5)0.2568 (4)0.076 (2)
N10.6011 (4)0.5630 (3)0.2931 (3)0.0171 (10)
N20.5835 (4)0.4394 (3)0.4342 (3)0.0138 (9)
N30.5741 (4)0.3751 (3)0.5074 (3)0.0138 (9)
N40.4129 (4)0.1305 (3)0.6945 (3)0.0168 (10)
C10.7110 (5)0.5362 (4)0.3701 (4)0.0136 (11)
C20.8302 (5)0.5696 (4)0.3747 (5)0.0255 (13)
H20.90620.54980.42930.031*
C30.8377 (6)0.6317 (5)0.2996 (5)0.0313 (15)
H30.91880.65410.30110.038*
C40.7259 (6)0.6607 (4)0.2223 (5)0.0285 (14)
H40.72820.70470.17050.034*
C50.6108 (5)0.6249 (4)0.2216 (4)0.0205 (12)
H50.53400.64480.16790.025*
C60.6980 (5)0.4684 (4)0.4476 (4)0.0147 (11)
C70.8175 (5)0.4367 (4)0.5349 (4)0.0195 (12)
H7A0.79340.39630.58260.029*
H7B0.86460.49560.57010.029*
H7C0.87220.39750.50870.029*
C80.4546 (5)0.3432 (4)0.4834 (4)0.0125 (11)
C90.4411 (5)0.2683 (4)0.5577 (4)0.0120 (10)
C100.3203 (5)0.2332 (4)0.5473 (4)0.0163 (11)
H100.24570.25610.49320.020*
C110.3101 (5)0.1652 (4)0.6160 (4)0.0182 (12)
H110.22710.14140.60800.022*
C120.5287 (5)0.1646 (4)0.7041 (4)0.0174 (12)
H120.60190.14100.75900.021*
C130.5467 (5)0.2326 (4)0.6377 (4)0.0148 (11)
H130.63070.25460.64680.018*
C150.0171 (6)0.4465 (6)0.1622 (6)0.0463 (19)
H15A−0.04620.39620.16170.069*
H15B0.02280.44970.09480.069*
H15C−0.00940.51140.17910.069*
C160.3117 (8)0.5665 (8)0.0072 (6)0.065 (3)
H16A0.39630.53650.02130.098*
H16B0.30710.6307−0.02650.098*
H16C0.24470.5224−0.03730.098*
U11U22U33U12U13U23
Pb0.01177 (12)0.01436 (11)0.01108 (11)0.00120 (9)0.00192 (8)−0.00026 (9)
Cl10.0206 (7)0.0349 (8)0.0335 (8)−0.0006 (7)0.0101 (6)−0.0074 (7)
O10.013 (2)0.020 (2)0.0106 (18)−0.0043 (15)−0.0003 (15)0.0014 (15)
O20.018 (2)0.037 (2)0.028 (2)−0.0036 (18)0.0004 (18)0.002 (2)
O30.046 (3)0.057 (3)0.035 (3)0.024 (2)0.018 (2)0.015 (2)
O40.028 (3)0.143 (6)0.057 (4)−0.022 (3)0.003 (3)0.039 (4)
O50.099 (5)0.097 (5)0.048 (4)−0.042 (4)0.031 (3)0.000 (3)
O60.078 (5)0.084 (5)0.098 (5)0.040 (4)0.027 (4)−0.015 (4)
O70.078 (4)0.075 (4)0.050 (4)0.013 (3)−0.006 (3)−0.032 (3)
N10.013 (2)0.021 (2)0.017 (2)−0.0003 (19)0.0044 (19)0.0029 (19)
N20.018 (2)0.011 (2)0.013 (2)0.0007 (18)0.0071 (18)0.0020 (17)
N30.010 (2)0.019 (2)0.011 (2)−0.0015 (18)0.0024 (18)0.0029 (18)
N40.017 (2)0.017 (2)0.015 (2)0.0003 (19)0.0042 (19)0.0030 (18)
C10.018 (3)0.009 (2)0.017 (3)0.000 (2)0.010 (2)−0.003 (2)
C20.014 (3)0.027 (3)0.033 (3)0.004 (2)0.006 (3)0.010 (3)
C30.021 (3)0.033 (4)0.043 (4)0.000 (3)0.015 (3)0.017 (3)
C40.036 (4)0.023 (3)0.030 (4)0.000 (3)0.016 (3)0.010 (3)
C50.023 (3)0.020 (3)0.017 (3)0.000 (2)0.005 (2)0.005 (2)
C60.013 (3)0.013 (2)0.017 (3)0.002 (2)0.004 (2)−0.001 (2)
C70.012 (3)0.026 (3)0.019 (3)0.003 (2)0.003 (2)0.006 (2)
C80.013 (3)0.012 (3)0.012 (3)0.000 (2)0.003 (2)−0.003 (2)
C90.015 (3)0.012 (2)0.010 (2)−0.002 (2)0.005 (2)−0.003 (2)
C100.013 (3)0.020 (3)0.011 (3)−0.002 (2)0.000 (2)0.000 (2)
C110.013 (3)0.020 (3)0.020 (3)−0.005 (2)0.004 (2)0.000 (2)
C120.016 (3)0.021 (3)0.014 (3)0.000 (2)0.003 (2)0.000 (2)
C130.013 (3)0.014 (3)0.017 (3)0.000 (2)0.005 (2)0.001 (2)
C150.024 (4)0.056 (5)0.044 (4)0.006 (3)−0.004 (3)−0.005 (4)
C160.043 (5)0.116 (8)0.031 (4)0.004 (5)0.007 (4)0.005 (5)
Pb—O12.415 (3)C2—H20.9500
Pb—O22.733 (4)C3—C41.378 (8)
Pb—O32.891 (4)C3—H30.9500
Pb—N12.669 (4)C4—C51.374 (8)
Pb—N22.493 (4)C4—H40.9500
Pb—N4i2.477 (4)C5—H50.9500
Cl1—O41.389 (5)C6—C71.505 (7)
Cl1—O61.406 (6)C7—H7A0.9800
Cl1—O51.412 (6)C7—H7B0.9800
Cl1—O71.417 (5)C7—H7C0.9800
O1—C81.268 (6)C8—C91.505 (7)
O2—C151.420 (7)C9—C131.384 (7)
O2—H2O0.8400C9—C101.389 (7)
O3—C161.392 (9)C10—C111.371 (7)
O3—H3O0.8400C10—H100.9500
N1—C51.345 (7)C11—H110.9500
N1—C11.354 (7)C12—C131.379 (7)
N2—C61.286 (7)C12—H120.9500
N2—N31.384 (6)C13—H130.9500
N3—C81.325 (7)C15—H15A0.9800
N4—C121.335 (7)C15—H15B0.9800
N4—C111.351 (7)C15—H15C0.9800
N4—Pbii2.477 (4)C16—H16A0.9800
C1—C21.389 (7)C16—H16B0.9800
C1—C61.475 (8)C16—H16C0.9800
C2—C31.379 (8)
O1—Pb—N4i85.45 (13)C2—C3—H3120.5
O1—Pb—N264.74 (12)C5—C4—C3118.7 (5)
N4i—Pb—N284.66 (14)C5—C4—H4120.7
O1—Pb—N1125.71 (12)C3—C4—H4120.7
N4i—Pb—N180.14 (14)N1—C5—C4123.4 (5)
N2—Pb—N161.99 (13)N1—C5—H5118.3
O1—Pb—O265.79 (12)C4—C5—H5118.3
N4i—Pb—O281.46 (14)N2—C6—C1116.6 (5)
N2—Pb—O2129.38 (13)N2—C6—C7124.6 (5)
N1—Pb—O2157.14 (13)C1—C6—C7118.8 (5)
O1—Pb—O3144.62 (13)C6—C7—H7A109.5
N4i—Pb—O373.20 (14)C6—C7—H7B109.5
N2—Pb—O3137.72 (13)H7A—C7—H7B109.5
N1—Pb—O378.73 (13)C6—C7—H7C109.5
O2—Pb—O383.06 (14)H7A—C7—H7C109.5
O4—Cl1—O6109.6 (5)H7B—C7—H7C109.5
O4—Cl1—O5108.9 (4)O1—C8—N3128.2 (5)
O6—Cl1—O5110.5 (4)O1—C8—C9118.6 (5)
O4—Cl1—O7109.7 (4)N3—C8—C9113.2 (4)
O6—Cl1—O7107.4 (4)C13—C9—C10118.1 (5)
O5—Cl1—O7110.6 (4)C13—C9—C8121.7 (5)
C8—O1—Pb116.7 (3)C10—C9—C8120.2 (5)
C15—O2—Pb135.5 (4)C11—C10—C9119.2 (5)
C15—O2—H2O112.3C11—C10—H10120.4
Pb—O2—H2O112.3C9—C10—H10120.4
C16—O3—Pb140.3 (5)N4—C11—C10122.8 (5)
C16—O3—H3O109.8N4—C11—H11118.6
Pb—O3—H3O109.8C10—C11—H11118.6
C5—N1—C1117.8 (5)N4—C12—C13122.9 (5)
C5—N1—Pb124.6 (3)N4—C12—H12118.6
C1—N1—Pb117.4 (3)C13—C12—H12118.6
C6—N2—N3115.5 (4)C12—C13—C9119.3 (5)
C6—N2—Pb126.5 (3)C12—C13—H13120.3
N3—N2—Pb117.6 (3)C9—C13—H13120.3
C8—N3—N2111.3 (4)O2—C15—H15A109.5
C12—N4—C11117.6 (4)O2—C15—H15B109.5
C12—N4—Pbii123.4 (3)H15A—C15—H15B109.5
C11—N4—Pbii118.7 (3)O2—C15—H15C109.5
N1—C1—C2121.5 (5)H15A—C15—H15C109.5
N1—C1—C6116.8 (5)H15B—C15—H15C109.5
C2—C1—C6121.7 (5)O3—C16—H16A109.5
C3—C2—C1119.6 (5)O3—C16—H16B109.5
C3—C2—H2120.2H16A—C16—H16B109.5
C1—C2—H2120.2O3—C16—H16C109.5
C4—C3—C2119.0 (6)H16A—C16—H16C109.5
C4—C3—H3120.5H16B—C16—H16C109.5
N4i—Pb—O1—C894.7 (4)C5—N1—C1—C2−1.2 (8)
N2—Pb—O1—C88.5 (3)Pb—N1—C1—C2−175.8 (4)
N1—Pb—O1—C820.3 (4)C5—N1—C1—C6−180.0 (5)
O2—Pb—O1—C8177.4 (4)Pb—N1—C1—C65.4 (6)
O3—Pb—O1—C8147.0 (3)N1—C1—C2—C30.2 (9)
O1—Pb—O2—C15168.6 (6)C6—C1—C2—C3178.9 (5)
N4i—Pb—O2—C15−102.5 (6)C1—C2—C3—C41.2 (9)
N2—Pb—O2—C15−178.4 (5)C2—C3—C4—C5−1.4 (10)
N1—Pb—O2—C15−65.8 (7)C1—N1—C5—C40.9 (8)
O3—Pb—O2—C15−28.6 (6)Pb—N1—C5—C4175.1 (4)
O1—Pb—O3—C16−79.2 (8)C3—C4—C5—N10.4 (9)
N4i—Pb—O3—C16−23.8 (8)N3—N2—C6—C1179.5 (4)
N2—Pb—O3—C1637.7 (9)Pb—N2—C6—C1−8.2 (6)
N1—Pb—O3—C1659.1 (8)N3—N2—C6—C70.4 (7)
O2—Pb—O3—C16−107.0 (8)Pb—N2—C6—C7172.8 (4)
O1—Pb—N1—C5167.4 (4)N1—C1—C6—N21.1 (7)
N4i—Pb—N1—C590.3 (4)C2—C1—C6—N2−177.7 (5)
N2—Pb—N1—C5179.5 (5)N1—C1—C6—C7−179.8 (5)
O2—Pb—N1—C553.5 (6)C2—C1—C6—C71.4 (8)
O3—Pb—N1—C515.6 (4)Pb—O1—C8—N3−6.4 (7)
O1—Pb—N1—C1−18.5 (4)Pb—O1—C8—C9173.2 (3)
N4i—Pb—N1—C1−95.5 (4)N2—N3—C8—O1−3.9 (7)
N2—Pb—N1—C1−6.3 (3)N2—N3—C8—C9176.6 (4)
O2—Pb—N1—C1−132.3 (4)O1—C8—C9—C13175.8 (5)
O3—Pb—N1—C1−170.2 (4)N3—C8—C9—C13−4.6 (7)
O1—Pb—N2—C6177.0 (5)O1—C8—C9—C10−4.4 (7)
N4i—Pb—N2—C689.5 (4)N3—C8—C9—C10175.2 (5)
N1—Pb—N2—C67.8 (4)C13—C9—C10—C110.0 (7)
O2—Pb—N2—C6163.8 (4)C8—C9—C10—C11−179.8 (5)
O3—Pb—N2—C631.8 (5)C12—N4—C11—C10−0.3 (8)
O1—Pb—N2—N3−10.8 (3)Pbii—N4—C11—C10−175.1 (4)
N4i—Pb—N2—N3−98.3 (3)C9—C10—C11—N40.4 (8)
N1—Pb—N2—N3−180.0 (4)C11—N4—C12—C13−0.1 (8)
O2—Pb—N2—N3−24.0 (4)Pbii—N4—C12—C13174.4 (4)
O3—Pb—N2—N3−156.0 (3)N4—C12—C13—C90.4 (8)
C6—N2—N3—C8−175.1 (4)C10—C9—C13—C12−0.4 (7)
Pb—N2—N3—C811.8 (5)C8—C9—C13—C12179.4 (5)
D—H···AD—HH···AD···AD—H···A
O2—H2o···O40.842.162.909 (7)149
O3—H3o···O5iii0.842.112.930 (7)166
Table 1

Selected bond lengths (Å)

Pb—O12.415 (3)
Pb—O22.733 (4)
Pb—O32.891 (4)
Pb—N12.669 (4)
Pb—N22.493 (4)
Pb—N4i2.477 (4)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2o⋯O40.842.162.909 (7)149
O3—H3o⋯O5ii0.842.112.930 (7)166

Symmetry code: (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization, antioxidant activities, and DNA-binding studies of (E)-N'-[1-(pyridin-2-yl)ethylidene]isonicotinohydrazide and its Pr(III) and Nd(III) complexes.

Authors:  Zhong-Yan Hao; Qi-Wan Liu; Jun Xu; Lei Jia; Shao-Bai Li
Journal:  Chem Pharm Bull (Tokyo)       Date:  2010-10       Impact factor: 1.645

3.  Trinitratobis{N'-[1-(2-pyridyl)ethylidene]isonicotinohydrazide}cerium(III): a three-dimensional cerium-organic supramolecular structure.

Authors:  Ying Ying Zhang; Shi Xiong Liu
Journal:  Acta Crystallogr C       Date:  2009-06-24       Impact factor: 1.172

4.  catena-Poly[[lead(II)-μ-N'-[1-(pyridin-2-yl-κN)ethyl-idene]isonicotino-hydrazidato-κN',O:N] perchlorate].

Authors:  Gholam Hossein Shahverdizadeh; Edward R T Tiekink; Babak Mirtamizdoust
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09
  4 in total
  2 in total

1.  catena-Poly[[(1,10-phenanthroline-κN,N')lead(II)]-di-μ-nitrato-κO,O':O'';κO:O',O''-[(1,10-phenanthroline-κN,N')lead(II)]-bis-(μ-2,2,2-trichloro-acetato-κO:O')].

Authors:  Gholam Hossein Shahverdizadeh; Seik Weng Ng; Edward R T Tiekink; Babak Mirtamizdoust
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04

2.  Crystal structures of two CuII compounds: catena-poly[[chlorido-copper(II)]-μ-N-[eth-oxy(pyridin-2-yl)methyl-idene]-N'-[oxido(pyridin-3-yl)methyl-idene]hydrazine-κ4 N,N',O:N''] and di-μ-chlorido-1:4κ2 Cl:Cl-2:3κ2 Cl:Cl-di-chlorido-2κCl,4κCl-bis[μ3-eth-oxy(pyridin-2-yl)methano-lato-1:2:3κ3 O:N,O:O;1:3:4κ3 O:O:N,O]bis-[μ2-eth-oxy(pyridin-2-yl)methano-lato-1:2κ3 N,O:O;3:4κ3 N,O:O]tetracopper(II).

Authors:  Ousmane Sall; Farba Bouyagui Tamboura; Adama Sy; Aliou Hamady Barry; Elhadj Ibrahima Thiam; Mohamed Gaye; Javier Ellena
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-06-28
  2 in total

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