| Literature DB >> 22199507 |
Abstract
In the title compound, [Cd(C(11)H(7)N(6))(2)(H(2)O)(2)], the Cd(II) cation is located on an inversion center and is coordinated by four N atoms from two 5-(pyrazin-2-yl)-3-(pyridin-3-yl)-1,2,4-triazol-ide anions and two water mol-ecules in a distorted octa-hedral geometry. The triazolide ligand is nearly planar: the central triazole ring is oriented at dihedral angles of 4.63 (13) and 8.41 (13)° with respect to the pyrazine and pyridine rings. Inter-molecular O-H⋯N hydrogen bonds link the mol-ecules into a two-dimensional supra-molecular network parallel to (001).Entities:
Year: 2011 PMID: 22199507 PMCID: PMC3238616 DOI: 10.1107/S1600536811045545
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C11H7N6)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2671 reflections |
| θ = 2.4–27.5° | |
| µ = 1.02 mm−1 | |
| β = 99.102 (6)° | Prism, colorless |
| 0.24 × 0.21 × 0.20 mm | |
| Bruker SMART CCD diffractometer | 2571 independent reflections |
| Radiation source: fine-focus sealed tube | 2251 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 11387 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2571 reflections | (Δ/σ)max < 0.001 |
| 175 parameters | Δρmax = 0.38 e Å−3 |
| 3 restraints | Δρmin = −0.82 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd1 | 0.0000 | 1.0000 | 0.0000 | 0.02997 (10) | |
| N1 | 0.0416 (2) | 1.1638 (3) | 0.09658 (9) | 0.0272 (4) | |
| N2 | 0.0947 (3) | 1.2756 (4) | 0.21582 (9) | 0.0365 (5) | |
| N3 | 0.1919 (2) | 0.7738 (3) | 0.05584 (9) | 0.0295 (4) | |
| N4 | 0.2884 (2) | 0.5850 (4) | 0.05077 (9) | 0.0306 (4) | |
| N5 | 0.3260 (2) | 0.6991 (3) | 0.14563 (9) | 0.0290 (4) | |
| N6 | 0.6292 (3) | 0.0309 (4) | 0.09166 (12) | 0.0395 (6) | |
| O1 | −0.1880 (2) | 0.7608 (3) | 0.03044 (8) | 0.0343 (4) | |
| H1A | −0.263 (3) | 0.840 (5) | 0.0406 (13) | 0.051* | |
| H1B | −0.227 (3) | 0.657 (4) | 0.0055 (12) | 0.051* | |
| C1 | −0.0256 (3) | 1.3500 (4) | 0.11794 (11) | 0.0321 (5) | |
| H1 | −0.0932 | 1.4440 | 0.0925 | 0.039* | |
| C2 | 0.0024 (3) | 1.4061 (5) | 0.17639 (12) | 0.0346 (6) | |
| H2 | −0.0445 | 1.5399 | 0.1890 | 0.042* | |
| C3 | 0.1625 (3) | 1.0904 (5) | 0.19467 (11) | 0.0340 (6) | |
| H3 | 0.2281 | 0.9955 | 0.2206 | 0.041* | |
| C4 | 0.1390 (3) | 1.0333 (4) | 0.13529 (11) | 0.0257 (5) | |
| C5 | 0.2188 (3) | 0.8347 (4) | 0.11250 (10) | 0.0266 (5) | |
| C6 | 0.3651 (3) | 0.5483 (4) | 0.10522 (12) | 0.0272 (5) | |
| C7 | 0.4792 (3) | 0.3558 (4) | 0.12057 (11) | 0.0288 (5) | |
| C8 | 0.5377 (3) | 0.3073 (5) | 0.17899 (12) | 0.0343 (6) | |
| H8 | 0.5079 | 0.3996 | 0.2085 | 0.041* | |
| C9 | 0.6405 (3) | 0.1208 (5) | 0.19295 (12) | 0.0379 (6) | |
| H9 | 0.6810 | 0.0867 | 0.2317 | 0.045* | |
| C10 | 0.6809 (3) | −0.0120 (4) | 0.14809 (15) | 0.0387 (7) | |
| H10 | 0.7480 | −0.1390 | 0.1576 | 0.046* | |
| C11 | 0.5315 (3) | 0.2144 (5) | 0.07830 (12) | 0.0361 (6) | |
| H11 | 0.4972 | 0.2485 | 0.0391 | 0.043* |
| Cd1 | 0.03525 (16) | 0.03198 (15) | 0.02068 (15) | 0.00690 (10) | −0.00171 (11) | −0.00100 (9) |
| N1 | 0.0299 (10) | 0.0262 (9) | 0.0249 (10) | 0.0034 (8) | 0.0026 (8) | −0.0011 (8) |
| N2 | 0.0473 (13) | 0.0357 (11) | 0.0264 (11) | 0.0039 (10) | 0.0051 (10) | −0.0055 (9) |
| N3 | 0.0328 (10) | 0.0286 (10) | 0.0265 (11) | 0.0071 (9) | 0.0029 (8) | −0.0022 (8) |
| N4 | 0.0332 (11) | 0.0292 (10) | 0.0290 (11) | 0.0085 (9) | 0.0034 (9) | −0.0033 (9) |
| N5 | 0.0289 (10) | 0.0302 (10) | 0.0264 (10) | 0.0061 (8) | 0.0001 (8) | −0.0010 (8) |
| N6 | 0.0334 (12) | 0.0420 (13) | 0.0434 (15) | 0.0122 (10) | 0.0067 (11) | −0.0048 (10) |
| O1 | 0.0345 (9) | 0.0326 (9) | 0.0357 (10) | 0.0041 (8) | 0.0055 (8) | −0.0061 (8) |
| C1 | 0.0355 (13) | 0.0287 (12) | 0.0318 (13) | 0.0068 (10) | 0.0044 (11) | 0.0012 (10) |
| C2 | 0.0423 (14) | 0.0292 (12) | 0.0342 (14) | 0.0054 (11) | 0.0119 (11) | −0.0028 (11) |
| C3 | 0.0411 (14) | 0.0338 (13) | 0.0251 (13) | 0.0057 (11) | −0.0005 (11) | −0.0005 (11) |
| C4 | 0.0249 (11) | 0.0282 (11) | 0.0237 (12) | 0.0012 (9) | 0.0029 (9) | 0.0017 (9) |
| C5 | 0.0262 (11) | 0.0264 (11) | 0.0269 (12) | 0.0027 (9) | 0.0036 (9) | −0.0001 (9) |
| C6 | 0.0237 (11) | 0.0295 (11) | 0.0281 (13) | 0.0035 (9) | 0.0033 (10) | −0.0002 (10) |
| C7 | 0.0256 (11) | 0.0282 (11) | 0.0316 (13) | 0.0043 (9) | 0.0018 (10) | 0.0007 (10) |
| C8 | 0.0331 (13) | 0.0359 (13) | 0.0330 (14) | 0.0057 (11) | 0.0030 (11) | −0.0010 (11) |
| C9 | 0.0355 (14) | 0.0410 (14) | 0.0357 (15) | 0.0077 (12) | 0.0011 (11) | 0.0070 (12) |
| C10 | 0.0323 (13) | 0.0335 (14) | 0.0497 (19) | 0.0104 (11) | 0.0045 (13) | 0.0053 (11) |
| C11 | 0.0330 (13) | 0.0431 (14) | 0.0315 (14) | 0.0084 (11) | 0.0031 (11) | −0.0025 (11) |
| Cd1—O1i | 2.312 (2) | O1—H1A | 0.850 (17) |
| Cd1—O1 | 2.312 (2) | O1—H1B | 0.859 (17) |
| Cd1—N1i | 2.397 (2) | C1—C2 | 1.374 (4) |
| Cd1—N1 | 2.397 (2) | C1—H1 | 0.9300 |
| Cd1—N3 | 2.323 (2) | C2—H2 | 0.9300 |
| Cd1—N3i | 2.323 (2) | C3—C4 | 1.396 (4) |
| N1—C1 | 1.339 (3) | C3—H3 | 0.9300 |
| N1—C4 | 1.351 (3) | C4—C5 | 1.464 (3) |
| N2—C3 | 1.334 (3) | C6—C7 | 1.478 (3) |
| N2—C2 | 1.338 (3) | C7—C11 | 1.396 (4) |
| N3—C5 | 1.341 (3) | C7—C8 | 1.395 (4) |
| N3—N4 | 1.375 (3) | C8—C9 | 1.388 (4) |
| N4—C6 | 1.345 (3) | C8—H8 | 0.9300 |
| N5—C5 | 1.347 (3) | C9—C10 | 1.373 (4) |
| N5—C6 | 1.351 (3) | C9—H9 | 0.9300 |
| N6—C10 | 1.335 (4) | C10—H10 | 0.9300 |
| N6—C11 | 1.347 (3) | C11—H11 | 0.9300 |
| O1i—Cd1—O1 | 180.00 (9) | N2—C2—C1 | 122.4 (2) |
| O1i—Cd1—N3 | 91.20 (8) | N2—C2—H2 | 118.8 |
| O1—Cd1—N3 | 88.80 (8) | C1—C2—H2 | 118.8 |
| O1i—Cd1—N3i | 88.80 (8) | N2—C3—C4 | 122.8 (2) |
| O1—Cd1—N3i | 91.20 (8) | N2—C3—H3 | 118.6 |
| N3—Cd1—N3i | 180.00 (9) | C4—C3—H3 | 118.6 |
| O1i—Cd1—N1i | 87.30 (7) | N1—C4—C3 | 120.3 (2) |
| O1—Cd1—N1i | 92.70 (7) | N1—C4—C5 | 117.6 (2) |
| N3—Cd1—N1i | 107.04 (7) | C3—C4—C5 | 122.1 (2) |
| N3i—Cd1—N1i | 72.96 (7) | N3—C5—N5 | 114.0 (2) |
| O1i—Cd1—N1 | 92.70 (7) | N3—C5—C4 | 122.2 (2) |
| O1—Cd1—N1 | 87.30 (7) | N5—C5—C4 | 123.8 (2) |
| N3—Cd1—N1 | 72.96 (7) | N4—C6—N5 | 114.3 (2) |
| N3i—Cd1—N1 | 107.04 (7) | N4—C6—C7 | 123.5 (2) |
| N1i—Cd1—N1 | 180.00 (4) | N5—C6—C7 | 122.2 (2) |
| C1—N1—C4 | 116.8 (2) | C11—C7—C8 | 117.3 (2) |
| C1—N1—Cd1 | 129.95 (16) | C11—C7—C6 | 122.3 (2) |
| C4—N1—Cd1 | 113.06 (15) | C8—C7—C6 | 120.4 (2) |
| C3—N2—C2 | 115.8 (2) | C9—C8—C7 | 119.8 (2) |
| C5—N3—N4 | 105.73 (19) | C9—C8—H8 | 120.1 |
| C5—N3—Cd1 | 113.59 (15) | C7—C8—H8 | 120.1 |
| N4—N3—Cd1 | 140.64 (16) | C10—C9—C8 | 118.3 (3) |
| C6—N4—N3 | 104.86 (19) | C10—C9—H9 | 120.9 |
| C5—N5—C6 | 101.1 (2) | C8—C9—H9 | 120.9 |
| C10—N6—C11 | 117.8 (2) | N6—C10—C9 | 123.7 (2) |
| Cd1—O1—H1A | 112 (2) | N6—C10—H10 | 118.2 |
| Cd1—O1—H1B | 115 (2) | C9—C10—H10 | 118.2 |
| H1A—O1—H1B | 108 (2) | N6—C11—C7 | 123.1 (3) |
| N1—C1—C2 | 121.9 (2) | N6—C11—H11 | 118.5 |
| N1—C1—H1 | 119.1 | C7—C11—H11 | 118.5 |
| C2—C1—H1 | 119.1 | ||
| O1i—Cd1—N1—C1 | 88.8 (2) | Cd1—N1—C4—C5 | 7.6 (3) |
| O1—Cd1—N1—C1 | −91.2 (2) | N2—C3—C4—N1 | −1.6 (4) |
| N3—Cd1—N1—C1 | 179.3 (2) | N2—C3—C4—C5 | 177.7 (2) |
| N3i—Cd1—N1—C1 | −0.7 (2) | N4—N3—C5—N5 | −0.3 (3) |
| N1i—Cd1—N1—C1 | −49.9 (6) | Cd1—N3—C5—N5 | 177.79 (16) |
| O1i—Cd1—N1—C4 | −97.06 (17) | N4—N3—C5—C4 | 179.0 (2) |
| O1—Cd1—N1—C4 | 82.94 (17) | Cd1—N3—C5—C4 | −2.9 (3) |
| N3—Cd1—N1—C4 | −6.62 (16) | C6—N5—C5—N3 | 0.3 (3) |
| N3i—Cd1—N1—C4 | 173.38 (16) | C6—N5—C5—C4 | −179.0 (2) |
| N1i—Cd1—N1—C4 | 124.2 (4) | N1—C4—C5—N3 | −3.4 (3) |
| O1i—Cd1—N3—C5 | 97.31 (17) | C3—C4—C5—N3 | 177.4 (2) |
| O1—Cd1—N3—C5 | −82.69 (17) | N1—C4—C5—N5 | 175.8 (2) |
| N3i—Cd1—N3—C5 | −54 (63) | C3—C4—C5—N5 | −3.5 (4) |
| N1i—Cd1—N3—C5 | −175.14 (16) | N3—N4—C6—N5 | 0.0 (3) |
| N1—Cd1—N3—C5 | 4.86 (16) | N3—N4—C6—C7 | 178.2 (2) |
| O1i—Cd1—N3—N4 | −85.7 (3) | C5—N5—C6—N4 | −0.2 (3) |
| O1—Cd1—N3—N4 | 94.3 (3) | C5—N5—C6—C7 | −178.4 (2) |
| N3i—Cd1—N3—N4 | 123 (62) | N4—C6—C7—C11 | 8.4 (4) |
| N1i—Cd1—N3—N4 | 1.9 (3) | N5—C6—C7—C11 | −173.5 (2) |
| N1—Cd1—N3—N4 | −178.1 (3) | N4—C6—C7—C8 | −170.8 (2) |
| C5—N3—N4—C6 | 0.1 (3) | N5—C6—C7—C8 | 7.2 (4) |
| Cd1—N3—N4—C6 | −177.05 (19) | C11—C7—C8—C9 | −1.5 (4) |
| C4—N1—C1—C2 | −0.1 (4) | C6—C7—C8—C9 | 177.7 (2) |
| Cd1—N1—C1—C2 | 173.81 (19) | C7—C8—C9—C10 | −0.4 (4) |
| C3—N2—C2—C1 | 2.1 (4) | C11—N6—C10—C9 | −0.3 (4) |
| N1—C1—C2—N2 | −1.9 (4) | C8—C9—C10—N6 | 1.3 (4) |
| C2—N2—C3—C4 | −0.4 (4) | C10—N6—C11—C7 | −1.8 (4) |
| C1—N1—C4—C3 | 1.8 (3) | C8—C7—C11—N6 | 2.7 (4) |
| Cd1—N1—C4—C3 | −173.18 (19) | C6—C7—C11—N6 | −176.5 (2) |
| C1—N1—C4—C5 | −177.5 (2) |
| H··· | ||||
| O1—H1A···N6ii | 0.85 (2) | 1.95 (2) | 2.751 (3) | 157 (3) |
| O1—H1B···N4iii | 0.86 (2) | 1.91 (2) | 2.763 (3) | 173 (3) |
Selected bond lengths (Å)
| Cd1—O1 | 2.312 (2) |
| Cd1—N1 | 2.397 (2) |
| Cd1—N3 | 2.323 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.85 (2) | 1.95 (2) | 2.751 (3) | 157 (3) |
| O1—H1 | 0.86 (2) | 1.91 (2) | 2.763 (3) | 173 (3) |
Symmetry codes: (i) ; (ii) .