| Literature DB >> 22199501 |
Abstract
In the title compound, [Yb(2)(C(5)H(2)N(2)O(4))(2)(SO(4))(H(2)O)(2)](n), the Yb(III) ion is eight-coordinated by four O atoms and one N atom from three imidazole-4,5-dicarboxyl-ate ligands, two O atoms from one SO(4) (2-) anion (site symmetry 2), as well as one O atom of a water mol-ecule, giving a bicapped trigonal-prismatic coordination geometry. The metal coordination units are connected by bridging imidazole-4,5-dicarboxyl-ate and sulfate ligands, generating a heterometallic layer. The layers are stacked along the a axis via N-H⋯O, O-H⋯O, and C-H⋯O hydrogen-bonding inter-actions, generating a three-dimensional framework.Entities:
Year: 2011 PMID: 22199501 PMCID: PMC3238610 DOI: 10.1107/S1600536811045673
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Yb2(C5H2N2O4)2(SO4)(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 2574 reflections |
| θ = 3.3–28.0° | |
| µ = 11.05 mm−1 | |
| β = 105.874 (1)° | Block, colorless |
| 0.20 × 0.18 × 0.15 mm | |
| Bruker APEXII area-detector diffractometer | 1534 independent reflections |
| Radiation source: fine-focus sealed tube | 1392 reflections with |
| graphite | |
| φ and ω scan | θmax = 25.2°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 4239 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1534 reflections | (Δ/σ)max = 0.001 |
| 150 parameters | Δρmax = 0.66 e Å−3 |
| 4 restraints | Δρmin = −0.99 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Yb1 | 0.355312 (10) | 0.07841 (3) | 0.714967 (16) | 0.01086 (9) | |
| S1 | 0.5000 | 0.0299 (3) | 0.7500 | 0.0182 (4) | |
| C1 | 0.3390 (2) | 0.0272 (7) | 0.9554 (4) | 0.0134 (10) | |
| C2 | 0.3697 (2) | 0.2318 (7) | 0.9654 (4) | 0.0148 (10) | |
| C3 | 0.3764 (2) | 0.3838 (7) | 1.0402 (4) | 0.0145 (10) | |
| C4 | 0.3492 (2) | 0.4128 (7) | 1.1340 (4) | 0.0128 (10) | |
| C5 | 0.4168 (2) | 0.4805 (8) | 0.9077 (4) | 0.0179 (11) | |
| H5 | 0.4371 | 0.5603 | 0.8664 | 0.022* | |
| N1 | 0.3942 (2) | 0.2930 (6) | 0.8817 (3) | 0.0165 (9) | |
| N2 | 0.4065 (2) | 0.5391 (6) | 1.0009 (3) | 0.0183 (10) | |
| H1 | 0.420 (3) | 0.648 (6) | 1.039 (4) | 0.027* | |
| O1 | 0.32418 (19) | −0.0583 (5) | 1.0318 (3) | 0.0220 (9) | |
| O2 | 0.32955 (18) | −0.0546 (5) | 0.8633 (3) | 0.0192 (8) | |
| O3 | 0.33204 (18) | 0.2591 (5) | 1.1767 (3) | 0.0219 (8) | |
| O4 | 0.34067 (19) | 0.5917 (5) | 1.1620 (3) | 0.0219 (8) | |
| O5 | 0.45816 (18) | −0.0925 (5) | 0.7997 (3) | 0.0304 (10) | |
| O6 | 0.45308 (19) | 0.1572 (6) | 0.6710 (3) | 0.0349 (10) | |
| O1W | 0.24374 (18) | 0.1038 (6) | 0.6799 (3) | 0.0250 (9) | |
| H2W | 0.224 (2) | 0.201 (6) | 0.646 (4) | 0.037* | |
| H1W | 0.221 (3) | 0.075 (8) | 0.720 (4) | 0.037* |
| Yb1 | 0.01712 (13) | 0.00743 (13) | 0.00944 (13) | 0.00016 (8) | 0.00604 (9) | 0.00022 (8) |
| S1 | 0.0156 (9) | 0.0145 (9) | 0.0250 (10) | 0.000 | 0.0063 (8) | 0.000 |
| C1 | 0.017 (2) | 0.010 (2) | 0.012 (3) | 0.0000 (19) | 0.001 (2) | 0.001 (2) |
| C2 | 0.021 (2) | 0.012 (3) | 0.011 (2) | −0.003 (2) | 0.0040 (19) | 0.000 (2) |
| C3 | 0.021 (3) | 0.013 (2) | 0.011 (2) | 0.002 (2) | 0.006 (2) | 0.001 (2) |
| C4 | 0.017 (2) | 0.010 (3) | 0.010 (2) | −0.0018 (19) | 0.002 (2) | −0.0017 (19) |
| C5 | 0.025 (3) | 0.015 (3) | 0.015 (3) | −0.005 (2) | 0.008 (2) | 0.003 (2) |
| N1 | 0.024 (2) | 0.012 (2) | 0.016 (2) | −0.0023 (17) | 0.0082 (18) | −0.0010 (17) |
| N2 | 0.027 (2) | 0.014 (2) | 0.016 (2) | −0.0064 (19) | 0.0084 (19) | −0.0018 (18) |
| O1 | 0.042 (2) | 0.0151 (19) | 0.0107 (19) | −0.0090 (16) | 0.0095 (17) | −0.0001 (15) |
| O2 | 0.033 (2) | 0.0155 (19) | 0.0110 (18) | −0.0084 (15) | 0.0090 (15) | −0.0058 (15) |
| O3 | 0.037 (2) | 0.0144 (19) | 0.0182 (18) | 0.0042 (16) | 0.0134 (16) | 0.0061 (16) |
| O4 | 0.039 (2) | 0.0103 (19) | 0.018 (2) | 0.0028 (16) | 0.0105 (17) | −0.0009 (14) |
| O5 | 0.021 (2) | 0.030 (2) | 0.041 (3) | 0.0019 (16) | 0.0104 (18) | 0.0155 (19) |
| O6 | 0.023 (2) | 0.044 (2) | 0.041 (3) | 0.0071 (19) | 0.0135 (19) | 0.027 (2) |
| O1W | 0.024 (2) | 0.023 (2) | 0.031 (2) | 0.0066 (17) | 0.0129 (18) | 0.0083 (17) |
| Yb1—O4i | 2.264 (3) | C1—C2 | 1.481 (6) |
| Yb1—O1ii | 2.272 (3) | C2—C3 | 1.367 (7) |
| Yb1—O1W | 2.280 (4) | C2—N1 | 1.377 (6) |
| Yb1—O3ii | 2.291 (3) | C3—N2 | 1.369 (6) |
| Yb1—O2 | 2.297 (3) | C3—C4 | 1.485 (7) |
| Yb1—O6 | 2.342 (4) | C4—O3 | 1.249 (6) |
| Yb1—O5 | 2.421 (4) | C4—O4 | 1.255 (5) |
| Yb1—N1 | 2.510 (4) | C5—N1 | 1.328 (6) |
| Yb1—S1 | 2.9798 (3) | C5—N2 | 1.334 (7) |
| S1—O5iii | 1.464 (4) | C5—H5 | 0.9300 |
| S1—O5 | 1.464 (4) | N2—H1 | 0.87 (5) |
| S1—O6iii | 1.470 (4) | O1—Yb1iv | 2.272 (3) |
| S1—O6 | 1.470 (4) | O3—Yb1iv | 2.291 (3) |
| S1—Yb1iii | 2.9798 (3) | O4—Yb1v | 2.264 (3) |
| C1—O1 | 1.244 (6) | O1W—H2W | 0.82 (2) |
| C1—O2 | 1.266 (6) | O1W—H1W | 0.82 (6) |
| O4i—Yb1—O1ii | 76.46 (12) | O6iii—S1—O6 | 110.8 (4) |
| O4i—Yb1—O1W | 79.74 (14) | O5iii—S1—Yb1 | 135.09 (15) |
| O1ii—Yb1—O1W | 78.99 (15) | O5—S1—Yb1 | 53.75 (14) |
| O4i—Yb1—O3ii | 148.74 (13) | O6iii—S1—Yb1 | 120.86 (16) |
| O1ii—Yb1—O3ii | 74.75 (12) | O6—S1—Yb1 | 50.65 (15) |
| O1W—Yb1—O3ii | 83.05 (14) | O5iii—S1—Yb1iii | 53.75 (14) |
| O4i—Yb1—O2 | 124.73 (12) | O5—S1—Yb1iii | 135.09 (15) |
| O1ii—Yb1—O2 | 140.73 (13) | O6iii—S1—Yb1iii | 50.65 (15) |
| O1W—Yb1—O2 | 74.07 (14) | O6—S1—Yb1iii | 120.86 (16) |
| O3ii—Yb1—O2 | 74.10 (12) | Yb1—S1—Yb1iii | 167.75 (7) |
| O4i—Yb1—O6 | 76.89 (14) | O1—C1—O2 | 122.7 (4) |
| O1ii—Yb1—O6 | 77.64 (14) | O1—C1—C2 | 122.6 (4) |
| O1W—Yb1—O6 | 150.11 (14) | O2—C1—C2 | 114.7 (4) |
| O3ii—Yb1—O6 | 108.21 (14) | C3—C2—N1 | 110.6 (4) |
| O2—Yb1—O6 | 135.20 (13) | C3—C2—C1 | 132.9 (5) |
| O4i—Yb1—O5 | 127.57 (13) | N1—C2—C1 | 116.5 (4) |
| O1ii—Yb1—O5 | 114.21 (14) | C2—C3—N2 | 104.5 (4) |
| O1W—Yb1—O5 | 150.85 (13) | C2—C3—C4 | 132.8 (4) |
| O3ii—Yb1—O5 | 76.28 (13) | N2—C3—C4 | 121.8 (4) |
| O2—Yb1—O5 | 80.58 (13) | O3—C4—O4 | 123.2 (5) |
| O6—Yb1—O5 | 58.02 (13) | O3—C4—C3 | 118.5 (4) |
| O4i—Yb1—N1 | 72.99 (13) | O4—C4—C3 | 118.1 (4) |
| O1ii—Yb1—N1 | 148.68 (12) | N1—C5—N2 | 111.0 (4) |
| O1W—Yb1—N1 | 101.95 (14) | N1—C5—H5 | 124.5 |
| O3ii—Yb1—N1 | 136.57 (13) | N2—C5—H5 | 124.5 |
| O2—Yb1—N1 | 66.31 (12) | C5—N1—C2 | 105.0 (4) |
| O6—Yb1—N1 | 88.79 (15) | C5—N1—Yb1 | 138.2 (3) |
| O5—Yb1—N1 | 80.25 (14) | C2—N1—Yb1 | 113.6 (3) |
| O4i—Yb1—S1 | 101.39 (10) | C5—N2—C3 | 109.0 (4) |
| O1ii—Yb1—S1 | 98.30 (10) | C5—N2—H1 | 130 (4) |
| O1W—Yb1—S1 | 176.78 (11) | C3—N2—H1 | 121 (4) |
| O3ii—Yb1—S1 | 94.59 (10) | C1—O1—Yb1iv | 141.5 (3) |
| O2—Yb1—S1 | 107.44 (9) | C1—O2—Yb1 | 127.3 (3) |
| O6—Yb1—S1 | 29.03 (9) | C4—O3—Yb1iv | 143.5 (3) |
| O5—Yb1—S1 | 29.18 (9) | C4—O4—Yb1v | 164.1 (3) |
| N1—Yb1—S1 | 81.27 (10) | S1—O5—Yb1 | 97.06 (18) |
| O5iii—S1—O5 | 113.5 (3) | S1—O6—Yb1 | 100.32 (19) |
| O5iii—S1—O6iii | 103.9 (2) | Yb1—O1W—H2W | 121 (4) |
| O5—S1—O6iii | 112.4 (2) | Yb1—O1W—H1W | 128 (4) |
| O5iii—S1—O6 | 112.4 (2) | H2W—O1W—H1W | 102 (3) |
| O5—S1—O6 | 103.9 (2) |
| H··· | ||||
| N2—H1···O6v | 0.87 (5) | 2.09 (3) | 2.925 (6) | 161 (5) |
| O1W—H2W···O2vi | 0.82 (2) | 1.94 (3) | 2.693 (5) | 151 (5) |
| O1W—H1W···O3vii | 0.82 (6) | 2.24 (4) | 2.896 (5) | 138 (5) |
| O1W—H1W···O4vii | 0.82 (6) | 2.51 (6) | 3.308 (5) | 167 (5) |
| C5—H5···O5viii | 0.93 | 2.52 | 3.347 (6) | 149. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1⋯O6i | 0.87 (5) | 2.09 (3) | 2.925 (6) | 161 (5) |
| O1 | 0.82 (2) | 1.94 (3) | 2.693 (5) | 151 (5) |
| O1 | 0.82 (6) | 2.24 (4) | 2.896 (5) | 138 (5) |
| O1 | 0.82 (6) | 2.51 (6) | 3.308 (5) | 167 (5) |
| C5—H5⋯O5iv | 0.93 | 2.52 | 3.347 (6) | 149 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .