Literature DB >> 22197514

Random models of Menzerath-Altmann law in genomes.

Jaume Baixeries1, Antoni Hernández-Fernández, Ramon Ferrer-I-Cancho.   

Abstract

Recently, a random breakage model has been proposed to explain the negative correlation between mean chromosome length and chromosome number that is found in many groups of species and is consistent with Menzerath-Altmann law, a statistical law that defines the dependency between the mean size of the whole and the number of parts in quantitative linguistics. Here, the central assumption of the model, namely that genome size is independent from chromosome number is reviewed. This assumption is shown to be unrealistic from the perspective of chromosome structure and the statistical analysis of real genomes. A general class of random models, including that random breakage model, is analyzed. For any model within this class, a power law with an exponent of -1 is predicted for the expectation of the mean chromosome size as a function of chromosome length, a functional dependency that is not supported by real genomes. The random breakage and variants keeping genome size and chromosome number independent raise no serious objection to the relevance of correlations consistent with Menzerath-Altmann law across taxonomic groups and the possibility of a connection between human language and genomes through that law.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

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Year:  2011        PMID: 22197514     DOI: 10.1016/j.biosystems.2011.11.010

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  5 in total

1.  Gelada vocal sequences follow Menzerath's linguistic law.

Authors:  Morgan L Gustison; Stuart Semple; Ramon Ferrer-I-Cancho; Thore J Bergman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

2.  Secondary Structures of Proteins Follow Menzerath-Altmann Law.

Authors:  Vladimír Matlach; Daniel Dostál; Marian Novotný
Journal:  Int J Mol Sci       Date:  2022-01-29       Impact factor: 5.923

3.  Menzerath-Altmann's Law of Syntax in RNA Accretion History.

Authors:  Fengjie Sun; Gustavo Caetano-Anollés
Journal:  Life (Basel)       Date:  2021-05-27

4.  The Compressed Vocabulary of Microbial Life.

Authors:  Gustavo Caetano-Anollés
Journal:  Front Microbiol       Date:  2021-07-07       Impact factor: 5.640

5.  The organization of domains in proteins obeys Menzerath-Altmann's law of language.

Authors:  Khuram Shahzad; Jay E Mittenthal; Gustavo Caetano-Anollés
Journal:  BMC Syst Biol       Date:  2015-08-11
  5 in total

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