Literature DB >> 22197415

The effective time of centrifugation for the analysis of boundary spreading in sedimentation velocity experiments.

Tabot M D Besong1, Stephen E Harding, Donald J Winzor.   

Abstract

This investigation establishes a likely order of magnitude for the zero-time correction factor governing the effective time of centrifugation that is pertinent in the analysis of boundary spreading in sedimentation velocity experiments. This correction is shown to be too small to unduly affect the magnitudes of sedimentation and diffusion coefficients deduced from the application of computer software incorporating the printout value of ω²t and an effective position of the air-solution meniscus that is obtained as an additional parameter in the analysis involving nonlinear least-squares curve-fitting of sedimentation velocity distributions to the Lamm equation. Although this procedure slightly underestimates the actual meniscus position (r(a)), uncertainty about its exact location precludes adoption of the alternative approach with r(a) fixed and the correction to ω²t regarded as the additional curve-fitting parameter.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22197415     DOI: 10.1016/j.ab.2011.11.035

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  4 in total

1.  Allowance for radial dilution in evaluating the concentration dependence of sedimentation coefficients for globular proteins.

Authors:  Trushar R Patel; Donald J Winzor; David J Scott
Journal:  Eur Biophys J       Date:  2017-10-04       Impact factor: 1.733

2.  Improving the thermal, radial, and temporal accuracy of the analytical ultracentrifuge through external references.

Authors:  Rodolfo Ghirlando; Andrea Balbo; Grzegorz Piszczek; Patrick H Brown; Marc S Lewis; Chad A Brautigam; Peter Schuck; Huaying Zhao
Journal:  Anal Biochem       Date:  2013-05-24       Impact factor: 3.365

3.  Overview of current methods in sedimentation velocity and sedimentation equilibrium analytical ultracentrifugation.

Authors:  Huaying Zhao; Chad A Brautigam; Rodolfo Ghirlando; Peter Schuck
Journal:  Curr Protoc Protein Sci       Date:  2013-02

Review 4.  Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem.

Authors:  Donald J Winzor; Vlad Dinu; David J Scott; Stephen E Harding
Journal:  Biophys Rev       Date:  2021-04-10
  4 in total

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