Literature DB >> 22196159

Computational modeling of mitochondrial energy transduction.

J P J Schmitz1, J Vanlier, N A W van Riel, Jeroen A L Jeneson.   

Abstract

Mitochondria are the power plant of the heart, burning fat and sugars to supply the muscle with the adenosine triphosphate (ATP) free energy that drives contraction and relaxation during each heart beat. This function was first captured in a mathematical model in 1967. Today, interest in such a model has been rekindled by ongoing in silico integrative physiology efforts such as the Cardiac Physiome project. Here, the status of the field of computational modeling of mitochondrial ATP synthetic function is reviewed.

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Year:  2011        PMID: 22196159      PMCID: PMC4051289          DOI: 10.1615/critrevbiomedeng.v39.i5.20

Source DB:  PubMed          Journal:  Crit Rev Biomed Eng        ISSN: 0278-940X


  67 in total

1.  Regulation of mitochondrial respiration in heart cells analyzed by reaction-diffusion model of energy transfer.

Authors:  M Vendelin; O Kongas; V Saks
Journal:  Am J Physiol Cell Physiol       Date:  2000-04       Impact factor: 4.249

2.  A metabolic control analysis of kinetic controls in ATP free energy metabolism in contracting skeletal muscle.

Authors:  J A Jeneson; H V Westerhoff; M J Kushmerick
Journal:  Am J Physiol Cell Physiol       Date:  2000-09       Impact factor: 4.249

3.  Kinetics and regulation of mammalian NADH-ubiquinone oxidoreductase (Complex I).

Authors:  Xuewen Chen; Feng Qi; Ranjan K Dash; Daniel A Beard
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

4.  Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood.

Authors:  A Raue; C Kreutz; T Maiwald; J Bachmann; M Schilling; U Klingmüller; J Timmer
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

5.  Flux balance analysis of biological systems: applications and challenges.

Authors:  Karthik Raman; Nagasuma Chandra
Journal:  Brief Bioinform       Date:  2009-03-15       Impact factor: 11.622

Review 6.  The mitochondrial proteome: a dynamic functional program in tissues and disease states.

Authors:  Robert S Balaban
Journal:  Environ Mol Mutagen       Date:  2010-06       Impact factor: 3.216

7.  Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry.

Authors:  B Teusink; J Passarge; C A Reijenga; E Esgalhado; C C van der Weijden; M Schepper; M C Walsh; B M Bakker; K van Dam; H V Westerhoff; J L Snoep
Journal:  Eur J Biochem       Date:  2000-09

8.  Flux-balance analysis of mitochondrial energy metabolism: consequences of systemic stoichiometric constraints.

Authors:  R Ramakrishna; J S Edwards; A McCulloch; B O Palsson
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2001-03       Impact factor: 3.619

Review 9.  Domestication of the cardiac mitochondrion for energy conversion.

Authors:  Robert S Balaban
Journal:  J Mol Cell Cardiol       Date:  2009-03-02       Impact factor: 5.000

10.  A biophysical model of the mitochondrial respiratory system and oxidative phosphorylation.

Authors:  Daniel A Beard
Journal:  PLoS Comput Biol       Date:  2005-09-09       Impact factor: 4.475

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  3 in total

Review 1.  Improving the physiological realism of experimental models.

Authors:  Kalyan C Vinnakota; Chae Y Cha; Patrik Rorsman; Robert S Balaban; Andre La Gerche; Richard Wade-Martins; Daniel A Beard; Jeroen A L Jeneson
Journal:  Interface Focus       Date:  2016-04-06       Impact factor: 3.906

2.  Synergy in free radical generation is blunted by high-fat diet induced alterations in skeletal muscle mitochondrial metabolism.

Authors:  Yanjun Li; Vipul Periwal
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

3.  Computational modeling of inhibition of voltage-gated Ca channels: identification of different effects on uterine and cardiac action potentials.

Authors:  Wing-Chiu Tong; Iffath Ghouri; Michael J Taggart
Journal:  Front Physiol       Date:  2014-10-16       Impact factor: 4.566

  3 in total

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