Literature DB >> 22193136

Conditional peripheral membrane proteins: facing up to limited specificity.

Katarina Moravcevic1, Camilla L Oxley, Mark A Lemmon.   

Abstract

Regulated relocalization of signaling and trafficking proteins is crucial for the control of many cellular processes and is driven by a series of domains that respond to alterations at membrane surfaces. The first examples of these domains--conditional peripheral membrane proteins--included C1, C2, PH, PX, and FYVE domains, which specifically recognize single tightly regulated membrane components such as diacylglycerol or phosphoinositides. The structural basis for this recognition is now well understood. Efforts to identify additional domains with similar functions that bind other targets (or participate in unexplained cellular processes) have not yielded many more examples of specific phospholipid-binding domains. Instead, most of the recently discovered conditional peripheral membrane proteins bind multiple targets (each with limited specificity), relying on coincidence detection and/or recognizing broader physical properties of the membrane such as charge or curvature. This broader range of recognition modes presents significant methodological challenges for a full structural understanding.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22193136      PMCID: PMC3265387          DOI: 10.1016/j.str.2011.11.012

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  92 in total

Review 1.  Membrane and juxtamembrane targeting by PH and PTB domains.

Authors:  Jonathan P DiNitto; David G Lambright
Journal:  Biochim Biophys Acta       Date:  2006-05-06

Review 2.  Membrane binding and subcellular targeting of C2 domains.

Authors:  Wonhwa Cho; Robert V Stahelin
Journal:  Biochim Biophys Acta       Date:  2006-07-26

3.  The C2 domain of PKCalpha is a Ca2+ -dependent PtdIns(4,5)P2 sensing domain: a new insight into an old pathway.

Authors:  Sonia Sánchez-Bautista; Consuelo Marín-Vicente; Juan C Gómez-Fernández; Senena Corbalán-García
Journal:  J Mol Biol       Date:  2006-08-09       Impact factor: 5.469

4.  Curved EFC/F-BAR-domain dimers are joined end to end into a filament for membrane invagination in endocytosis.

Authors:  Atsushi Shimada; Hideaki Niwa; Kazuya Tsujita; Shiro Suetsugu; Koji Nitta; Kyoko Hanawa-Suetsugu; Ryogo Akasaka; Yuri Nishino; Mitsutoshi Toyama; Lirong Chen; Zhi-Jie Liu; Bi-Cheng Wang; Masaki Yamamoto; Takaho Terada; Atsuo Miyazawa; Akiko Tanaka; Sumio Sugano; Mikako Shirouzu; Kuniaki Nagayama; Tadaomi Takenawa; Shigeyuki Yokoyama
Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

Review 5.  The Phox (PX) domain proteins and membrane traffic.

Authors:  Li-Fong Seet; Wanjin Hong
Journal:  Biochim Biophys Acta       Date:  2006-05-06

Review 6.  Phosphoinositides in cell regulation and membrane dynamics.

Authors:  Gilbert Di Paolo; Pietro De Camilli
Journal:  Nature       Date:  2006-10-12       Impact factor: 49.962

7.  Non-canonical interaction of phosphoinositides with pleckstrin homology domains of Tiam1 and ArhGAP9.

Authors:  Derek F J Ceccarelli; Ivan M Blasutig; Marilyn Goudreault; Zhiqin Li; Julie Ruston; Tony Pawson; Frank Sicheri
Journal:  J Biol Chem       Date:  2007-03-05       Impact factor: 5.157

Review 8.  C1 domains exposed: from diacylglycerol binding to protein-protein interactions.

Authors:  Francheska Colón-González; Marcelo G Kazanietz
Journal:  Biochim Biophys Acta       Date:  2006-05-13

9.  Phospholipase D2-generated phosphatidic acid couples EGFR stimulation to Ras activation by Sos.

Authors:  Chen Zhao; Guangwei Du; Karl Skowronek; Michael A Frohman; Dafna Bar-Sagi
Journal:  Nat Cell Biol       Date:  2007-05-07       Impact factor: 28.824

10.  Stabilized phosphatidylinositol-5-phosphate analogues as ligands for the nuclear protein ING2: chemistry, biology, and molecular modeling.

Authors:  Wei Huang; Honglu Zhang; Foteini Davrazou; Tatiana G Kutateladze; Xiaobing Shi; Or Gozani; Glenn D Prestwich
Journal:  J Am Chem Soc       Date:  2007-05-01       Impact factor: 15.419

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  88 in total

1.  Lipid targeting domain with dual-membrane specificity that expands the diversity of intracellular targeting reactions.

Authors:  Joseph J Falke
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-26       Impact factor: 11.205

2.  Two-site recognition of phosphatidylinositol 3-phosphate by PROPPINs in autophagy.

Authors:  Sulochanadevi Baskaran; Michael J Ragusa; Evzen Boura; James H Hurley
Journal:  Mol Cell       Date:  2012-06-14       Impact factor: 17.970

3.  Microscopic Characterization of GRP1 PH Domain Interaction with Anionic Membranes.

Authors:  Shashank Pant; Emad Tajkhorshid
Journal:  J Comput Chem       Date:  2019-11-25       Impact factor: 3.376

Review 4.  Structure-function relationships of membrane-associated GT-B glycosyltransferases.

Authors:  David Albesa-Jové; David Giganti; Mary Jackson; Pedro M Alzari; Marcelo E Guerin
Journal:  Glycobiology       Date:  2013-11-18       Impact factor: 4.313

Review 5.  Cargo recognition in clathrin-mediated endocytosis.

Authors:  Linton M Traub; Juan S Bonifacino
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

6.  PI3P binding by Atg21 organises Atg8 lipidation.

Authors:  Lisa Juris; Marco Montino; Peter Rube; Petra Schlotterhose; Michael Thumm; Roswitha Krick
Journal:  EMBO J       Date:  2015-02-17       Impact factor: 11.598

7.  An Autoinhibitory Role for the Pleckstrin Homology Domain of Interleukin-2-Inducible Tyrosine Kinase and Its Interplay with Canonical Phospholipid Recognition.

Authors:  Sujan Devkota; Raji E Joseph; Scott E Boyken; D Bruce Fulton; Amy H Andreotti
Journal:  Biochemistry       Date:  2017-05-25       Impact factor: 3.162

Review 8.  Cellular and molecular interactions of phosphoinositides and peripheral proteins.

Authors:  Robert V Stahelin; Jordan L Scott; Cary T Frick
Journal:  Chem Phys Lipids       Date:  2014-02-17       Impact factor: 3.329

9.  Skywalker-TBC1D24 has a lipid-binding pocket mutated in epilepsy and required for synaptic function.

Authors:  Baptiste Fischer; Kevin Lüthy; Jone Paesmans; Charlotte De Koninck; Ine Maes; Jef Swerts; Sabine Kuenen; Valerie Uytterhoeven; Patrik Verstreken; Wim Versées
Journal:  Nat Struct Mol Biol       Date:  2016-09-26       Impact factor: 15.369

10.  Calmodulin and PI(3,4,5)P₃ cooperatively bind to the Itk pleckstrin homology domain to promote efficient calcium signaling and IL-17A production.

Authors:  Xinxin Wang; Scott E Boyken; Jiancheng Hu; Xiaolu Xu; Ryan P Rimer; Madeline A Shea; Andrey S Shaw; Amy H Andreotti; Yina H Huang
Journal:  Sci Signal       Date:  2014-08-05       Impact factor: 8.192

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