Literature DB >> 22186285

Direct phasing from Patterson syntheses by δ recycling.

Jordi Rius1.   

Abstract

The direct methods origin-free modulus sum function [Rius (1993). Acta Cryst. A49, 406-409] includes in its definition the structure factor G(Φ) of the squared crystal structure expressed in terms of Φ, the set of φ phases of the normalized structure factors E's of the crystal structure of unit-cell volume V. Here the simpler sum function variant S'(P) = ∑(H)E(-H)∫(V)δ(P,Δ)(Φ)exp(i2πHr)dV extended over all H reflections is introduced which involves no G's and in which the δ(P,Δ) function corresponds to δ(P) = FT(-1){(E(2)(H) - <E(2)>)exp[iφ(H)(Φ)]} (where FT = Fourier transform) with all values smaller than Δ = 2.5σ(P) equated to zero (σ(2)(P) is the variance of δ(P) calculable from the experimental intensities). The new phase estimates are obtained by Fourier transforming δ(P,Δ). This iterative phasing method (δ recycling) only requires calculation of Fourier transforms at two stages. Since δ(M) ≃ δ(P)/2, similar arguments are valid for δ(M) = FT(-1)[(E(H) - <E>)exp(iφ(H))] from which the corresponding S'(M) phasing function follows.

Year:  2011        PMID: 22186285     DOI: 10.1107/S0108767311043145

Source DB:  PubMed          Journal:  Acta Crystallogr A        ISSN: 0108-7673            Impact factor:   2.290


  4 in total

1.  Novel phasing method using the origin-free modulus sum function expressed in terms of the absolute electron density.

Authors:  Jordi Rius
Journal:  Acta Crystallogr A Found Adv       Date:  2020-06-01       Impact factor: 2.290

Review 2.  Application of synchrotron through-the-substrate microdiffraction to crystals in polished thin sections.

Authors:  Jordi Rius; Oriol Vallcorba; Carlos Frontera; Inmaculada Peral; Anna Crespi; Carles Miravitlles
Journal:  IUCrJ       Date:  2015-06-11       Impact factor: 4.769

Review 3.  Application of Patterson-function direct methods to materials characterization.

Authors:  Jordi Rius
Journal:  IUCrJ       Date:  2014-08-29       Impact factor: 4.769

4.  A new density-modification procedure extending the application of the recent |ρ|-based phasing algorithm to larger crystal structures.

Authors:  Jordi Rius; Xavier Torrelles
Journal:  Acta Crystallogr A Found Adv       Date:  2021-06-21       Impact factor: 2.290

  4 in total

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