Literature DB >> 22182754

Dynamic dissociating homo-oligomers and the control of protein function.

Trevor Selwood1, Eileen K Jaffe.   

Abstract

Homo-oligomeric protein assemblies are known to participate in dynamic association/disassociation equilibria under native conditions, thus creating an equilibrium of assembly states. Such quaternary structure equilibria may be influenced in a physiologically significant manner either by covalent modification or by the non-covalent binding of ligands. This review follows the evolution of ideas about homo-oligomeric equilibria through the 20th and into the 21st centuries and the relationship of these equilibria to allosteric regulation by the non-covalent binding of ligands. A dynamic quaternary structure equilibria is described where the dissociated state can have alternate conformations that cannot reassociate to the original multimer; the alternate conformations dictate assembly to functionally distinct alternate multimers of finite stoichiometry. The functional distinction between different assemblies provides a mechanism for allostery. The requirement for dissociation distinguishes this morpheein model of allosteric regulation from the classical MWC concerted and KNF sequential models. These models are described alongside earlier dissociating allosteric models. The identification of proteins that exist as an equilibrium of diverse native quaternary structure assemblies has the potential to define new targets for allosteric modulation with significant consequences for further understanding and/or controlling protein structure and function. Thus, a rationale for identifying proteins that may use the morpheein model of allostery is presented and a selection of proteins for which published data suggests this mechanism may be operative are listed. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22182754      PMCID: PMC3298769          DOI: 10.1016/j.abb.2011.11.020

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  218 in total

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  38 in total

Review 1.  Allosteric regulation of phenylalanine hydroxylase.

Authors:  Paul F Fitzpatrick
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Review 2.  Structure, function, and mechanism of proline utilization A (PutA).

Authors:  Li-Kai Liu; Donald F Becker; John J Tanner
Journal:  Arch Biochem Biophys       Date:  2017-07-14       Impact factor: 4.013

3.  Structure and characterization of a class 3B proline utilization A: Ligand-induced dimerization and importance of the C-terminal domain for catalysis.

Authors:  David A Korasick; Thameesha T Gamage; Shelbi Christgen; Kyle M Stiers; Lesa J Beamer; Michael T Henzl; Donald F Becker; John J Tanner
Journal:  J Biol Chem       Date:  2017-04-18       Impact factor: 5.157

4.  Protein oligomerization as a metabolic control mechanism: Application to apoE.

Authors:  Carl Frieden
Journal:  Protein Sci       Date:  2019-02-18       Impact factor: 6.725

5.  Impact of quaternary structure dynamics on allosteric drug discovery.

Authors:  Eileen K Jaffe
Journal:  Curr Top Med Chem       Date:  2013       Impact factor: 3.295

6.  A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics.

Authors:  Eileen K Jaffe; Linda Stith; Sarah H Lawrence; Mark Andrake; Roland L Dunbrack
Journal:  Arch Biochem Biophys       Date:  2013-01-11       Impact factor: 4.013

7.  Environmental contaminants perturb fragile protein assemblies and inhibit normal protein function.

Authors:  Sarah H Lawrence; Trevor Selwood; Eileen K Jaffe
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8.  Architecture and assembly of HIV integrase multimers in the absence of DNA substrates.

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9.  Assessment of protein assembly prediction in CASP13.

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Journal:  Proteins       Date:  2019-08-27

Review 10.  Beyond the cytoskeleton: mesoscale assemblies and their function in spatial organization.

Authors:  Maxwell Z Wilson; Zemer Gitai
Journal:  Curr Opin Microbiol       Date:  2013-04-17       Impact factor: 7.934

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