Literature DB >> 22181447

Looped star polymers show conformational transition from spherical to flat toroidal shapes.

Pascal Reiss1, Miriam Fritsche, Dieter W Heermann.   

Abstract

Inspired by the topological organization of the circular Escherichia coli chromosome, which is compacted by separate domains, we study a polymer architecture consisting of a central ring to which either looped or linear side chains are grafted. A shape change from a spherical to a toroidal organization takes place as soon as the inner ring becomes large enough for the attached arms to fit within its circumference. Building up a torus, the system flattens, depending on the effective bending rigidity of the chain induced by entropic repulsion of the attached loops and, to a lesser extent, linear arms. Our results suggest that the natural formation of a toroidal structure with a decreased amount of writhe induced by a specific underlying topology could be one driving force, among others, that nature exploits to ensure proper packaging of the genetic material within a rod-shaped, bacterial envelope.

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Year:  2011        PMID: 22181447     DOI: 10.1103/PhysRevE.84.051910

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome.

Authors:  Fabai Wu; Pinaki Swain; Louis Kuijpers; Xuan Zheng; Kevin Felter; Margot Guurink; Jacopo Solari; Suckjoon Jun; Thomas S Shimizu; Debasish Chaudhuri; Bela Mulder; Cees Dekker
Journal:  Curr Biol       Date:  2019-05-30       Impact factor: 10.834

2.  Mesoscale Simulation of Bacterial Chromosome and Cytoplasmic Nanoparticles in Confinement.

Authors:  Shi Yu; Jiaxin Wu; Xianliang Meng; Ruizhi Chu; Xiao Li; Guoguang Wu
Journal:  Entropy (Basel)       Date:  2021-04-28       Impact factor: 2.524

  2 in total

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