Literature DB >> 22180688

Biology in a gray box: targeting the emergent properties of protein complexes: 2011 Yale Chemical Biology Symposium.

Victor Wong1.   

Abstract

At the 2011 Yale Chemical Biology Symposium, Jason Gestwicki presented a novel yet intuitive approach to drug screening. This method, which he termed "gray box" screening, targets protein complexes that have been reconstituted in vitro. Therefore, the gray box screen can achieve greater phenotypic complexity than biochemical assays but avoids the need for target identification that follows cell-based assays. Dr. Gestwicki's research group was able to use the gray box screen to identify myricetin as an inhibitor of the DnaK-DnaJ chaperone complex. This review will discuss Dr. Gestwicki's approach to identifying DnaK-DnaJ inhibitors as well as where the gray box screen fits among traditional techniques in drug discovery.

Entities:  

Keywords:  DnaK-DnaJ complex; Jason Gestwicki; biochemical screen; cell-based screen; emergent properties; gray box screen; myricetin; protein complexes

Mesh:

Substances:

Year:  2011        PMID: 22180688      PMCID: PMC3238318     

Source DB:  PubMed          Journal:  Yale J Biol Med        ISSN: 0044-0086


  17 in total

Review 1.  Cell-based assays: fuelling drug discovery.

Authors:  Elisa Michelini; Luca Cevenini; Laura Mezzanotte; Andrea Coppa; Aldo Roda
Journal:  Anal Bioanal Chem       Date:  2010-07-11       Impact factor: 4.142

2.  Development and optimization of a useful assay for determining Hsp90's inherent ATPase activity.

Authors:  Christopher Avila; Boris A Kornilayev; Brian S J Blagg
Journal:  Bioorg Med Chem       Date:  2005-10-04       Impact factor: 3.641

Review 3.  Drugs, their targets and the nature and number of drug targets.

Authors:  Peter Imming; Christian Sinning; Achim Meyer
Journal:  Nat Rev Drug Discov       Date:  2006-10       Impact factor: 84.694

4.  High-throughput screen for small molecules that modulate the ATPase activity of the molecular chaperone DnaK.

Authors:  Lyra Chang; Eric B Bertelsen; Susanne Wisén; Erik M Larsen; Erik R P Zuiderweg; Jason E Gestwicki
Journal:  Anal Biochem       Date:  2007-08-22       Impact factor: 3.365

Review 5.  Fluorescence polarization immunoassays and related methods for simple, high-throughput screening of small molecules.

Authors:  David S Smith; Sergei A Eremin
Journal:  Anal Bioanal Chem       Date:  2008-02-10       Impact factor: 4.142

6.  Structural analysis of substrate binding by the molecular chaperone DnaK.

Authors:  X Zhu; X Zhao; W F Burkholder; A Gragerov; C M Ogata; M E Gottesman; W A Hendrickson
Journal:  Science       Date:  1996-06-14       Impact factor: 47.728

7.  Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK.

Authors:  C J Harrison; M Hayer-Hartl; M Di Liberto; F Hartl; J Kuriyan
Journal:  Science       Date:  1997-04-18       Impact factor: 47.728

Review 8.  Illuminating insights into firefly luciferase and other bioluminescent reporters used in chemical biology.

Authors:  Natasha Thorne; James Inglese; Douglas S Auld
Journal:  Chem Biol       Date:  2010-06-25

Review 9.  Hsp70 chaperones: cellular functions and molecular mechanism.

Authors:  M P Mayer; B Bukau
Journal:  Cell Mol Life Sci       Date:  2005-03       Impact factor: 9.261

10.  Development of a cell-based hepatitis C virus infection fluorescent resonance energy transfer assay for high-throughput antiviral compound screening.

Authors:  Xuemei Yu; Bruno Sainz; Susan L Uprichard
Journal:  Antimicrob Agents Chemother       Date:  2009-07-20       Impact factor: 5.191

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  1 in total

Review 1.  Direct and Propagated Effects of Small Molecules on Protein-Protein Interaction Networks.

Authors:  Laura C Cesa; Anna K Mapp; Jason E Gestwicki
Journal:  Front Bioeng Biotechnol       Date:  2015-08-24
  1 in total

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