Literature DB >> 22177888

Applicability of a multiplex PCR to detect O26, O45, O103, O111, O121, O145, and O157 serogroups of Escherichia coli in cattle feces.

Zachary Paddock1, Xiaorong Shi, Jianfa Bai, T G Nagaraja.   

Abstract

Shiga toxin-producing Escherichia coli (STEC), particularly O157, are major food borne pathogens. Non-O157 STEC, particularly O26, O45, O103, O111, O121, and O145, have also been recognized as a major public health concern. Unlike O157, detection procedures for non-O157 have not been fully developed. Our objective was to develop a multiplex PCR to distinguish O157 and the 'top six' non-O157 serogroups (O26, O45, O103, O111, O121, and O145) and evaluate the applicability of the multiplex PCR to detect the seven serogroups of E. coli in cattle feces. Published sequences of O-specific antigen coding genes, rfbE (O157) and wzx and wbqE-F (non-O157), were analyzed to design serogroup-specific primers. The specificity of amplifications was confirmed with 138 known STEC strains and the reaction yielded the expected amplicons for each serogroup. In feces spiked with pooled 7 STEC strains, the sensitivity of the detection was 4.1 × 10(5)CFU/g before enrichment and 2.3 × 10(2) after 6h enrichment in E. coli broth. Additionally, 216 fecal samples from cattle were collected and tested by multiplex PCR and cultural methods. The multiplex PCR revealed a high prevalence of all seven serogroups (178 [O26], 108 [O45], 149 [O103], 30 [O111], 103 [O121], 5 [O145], and 160 [O157]) of 216 samples in fecal samples. Cultural procedures identified 33.1% (53/160) and 35.5% (11/31) of PCR-positive samples for E. coli O157 and non-O157 serogroups, respectively. Samples that were culture-positive were all positive by the multiplex PCR. The multiplex PCR can be used to identify serogroups of putative STEC isolates. Copyright Â
© 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22177888     DOI: 10.1016/j.vetmic.2011.11.017

Source DB:  PubMed          Journal:  Vet Microbiol        ISSN: 0378-1135            Impact factor:   3.293


  13 in total

1.  Detection of Escherichia coli O104 in the feces of feedlot cattle by a multiplex PCR assay designed to target major genetic traits of the virulent hybrid strain responsible for the 2011 German outbreak.

Authors:  Z D Paddock; J Bai; X Shi; D G Renter; T G Nagaraja
Journal:  Appl Environ Microbiol       Date:  2013-03-29       Impact factor: 4.792

2.  Comparison of Enrichment Broths for Supporting Growth of Shiga Toxin-Producing Escherichia coli.

Authors:  Zachary R Stromberg; Gentry L Lewis; David B Marx; Rodney A Moxley
Journal:  Curr Microbiol       Date:  2015-04-28       Impact factor: 2.188

3.  Single-Cell-Based Digital PCR Detection and Association of Shiga Toxin-Producing Escherichia coli Serogroups and Major Virulence Genes.

Authors:  Xuming Liu; Lance Noll; Xiaorong Shi; Elizabeth Porter; Yin Wang; Colin Stoy; Nanyan Lu; T G Nagaraja; Gary Anderson; Jianfa Bai
Journal:  J Clin Microbiol       Date:  2020-02-24       Impact factor: 5.948

4.  Nationwide investigation of Shiga toxin-producing Escherichia coli among cattle in Japan revealed the risk factors and potentially virulent subgroups.

Authors:  K Lee; M Kusumoto; T Iwata; S Iyoda; M Akiba
Journal:  Epidemiol Infect       Date:  2017-03-06       Impact factor: 4.434

5.  A Comparison of Culture- and PCR-Based Methods to Detect Six Major Non-O157 Serogroups of Shiga Toxin-Producing Escherichia coli in Cattle Feces.

Authors:  Lance W Noll; Pragathi B Shridhar; Diana M Dewsbury; Xiaorong Shi; Natalia Cernicchiaro; David G Renter; T G Nagaraja
Journal:  PLoS One       Date:  2015-08-13       Impact factor: 3.240

6.  Molecular Characterization of Enterotoxin-Producing Escherichia coli Collected in 2011-2012, Russia.

Authors:  Nikolay N Kartsev; Nadezhda K Fursova; Dmitry M Pachkunov; Vasiliy A Bannov; Boris V Eruslanov; Edward A Svetoch; Ivan A Dyatlov
Journal:  PLoS One       Date:  2015-04-29       Impact factor: 3.240

7.  Influence of Season and Feedlot Location on Prevalence and Virulence Factors of Seven Serogroups of Escherichia coli in Feces of Western-Canadian Slaughter Cattle.

Authors:  Kim Stanford; Roger P Johnson; Trevor W Alexander; Tim A McAllister; Tim Reuter
Journal:  PLoS One       Date:  2016-08-02       Impact factor: 3.240

8.  Development of 11-Plex MOL-PCR Assay for the Rapid Screening of Samples for Shiga Toxin-Producing Escherichia coli.

Authors:  Travis A Woods; Heather M Mendez; Sandy Ortega; Xiaorong Shi; David Marx; Jianfa Bai; Rodney A Moxley; T G Nagaraja; Steven W Graves; Alina Deshpande
Journal:  Front Cell Infect Microbiol       Date:  2016-08-31       Impact factor: 5.293

9.  Characterization of Shiga Toxigenic Escherichia coli O157 and Non-O157 Isolates from Ruminant Feces in Malaysia.

Authors:  Asanthi Perera; Charles M Clarke; Gary A Dykes; Narelle Fegan
Journal:  Biomed Res Int       Date:  2015-10-11       Impact factor: 3.411

10.  Multiplex PCR Assays for the Detection of One Hundred and Thirty Seven Serogroups of Shiga Toxin-Producing Escherichia coli Associated With Cattle.

Authors:  Justin B Ludwig; Xiaorong Shi; Pragathi B Shridhar; Elisabeth L Roberts; Chitrita DebRoy; Randy K Phebus; Jianfa Bai; T G Nagaraja
Journal:  Front Cell Infect Microbiol       Date:  2020-07-29       Impact factor: 5.293

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