Literature DB >> 22171973

TOP1 gene copy numbers in colorectal cancer samples and cell lines and their association to in vitro drug sensitivity.

Maria Unni Rømer1, Niels Frank Jensen, Signe Lykke Nielsen, Sven Müller, Kirsten Vang Nielsen, Hans Jørgen Nielsen, Nils Brünner.   

Abstract

OBJECTIVE: A positive relationship between topoisomerase-1 (TOP1) protein and sensitivity toward the TOP1 inhibitor irinotecan has been reported in patients with metastatic colorectal cancer (mCRC). In this study, we analyzed TOP1 gene copy number variation in tumor tissue from CRC patients and CRC cell lines with different sensitivities to the TOP1 inhibitor SN-38 and oxaliplatin.
MATERIAL AND METHODS: A TOP1 gene probe with a chromosome 20 centromere (CEN-20) reference probe was applied on normal mucosa and on tumor tissue from 50 stage III CRC patients. Additionally, associations between TOP1/CEN-20 ratio and in vitro sensitivity to SN-38 (irinotecan) and oxaliplatin were tested on 10 CRC cell lines. Results. In the malignant epithelium, 84% of the samples demonstrated an increased TOP1 gene copy number and 64% had an increased TOP1/CEN-20 ratio compared with the non-affected mucosa. Sixteen (32%) of the tumors had a ratio of ≥ 1.5 and 9 (18%) of these had a ratio of ≥ 2.0. A positive association was observed between the TOP1 gene copy number and the TOP1/CEN-20 ratio and in vitro sensitivity toward SN-38, but not toward oxaliplatin.
CONCLUSIONS: A large fraction of the clinical samples demonstrated increased TOP1 gene copy number and increased TOP1/CEN-20 ratio. The cell line study suggested an association between TOP1 gene copy number or TOP1/CEN-20 ratio and sensitivity to irinotecan but not oxaliplatin.

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Year:  2012        PMID: 22171973     DOI: 10.3109/00365521.2011.638393

Source DB:  PubMed          Journal:  Scand J Gastroenterol        ISSN: 0036-5521            Impact factor:   2.423


  16 in total

1.  Topoisomerase 1(TOP1) gene copy number in stage III colorectal cancer patients and its relation to prognosis.

Authors:  Maria Unni Rømer; Sune Boris Nygård; Ib Jarle Christensen; Signe Lykke Nielsen; Kirsten Vang Nielsen; Sven Müller; David Hersi Smith; Ben Vainer; Hans Jørgen Nielsen; Nils Brünner
Journal:  Mol Oncol       Date:  2012-10-11       Impact factor: 6.603

2.  Measuring ERCC1 protein expression in cancer specimens: validation of a novel antibody.

Authors:  David Hersi Smith; Anne-Marie Kanstrup Fiehn; Louise Fogh; Ib Jarle Christensen; Tine Plato Hansen; Jan Stenvang; Hans Jørgen Nielsen; Kirsten Vang Nielsen; Jane Preuss Hasselby; Nils Brünner; Sussie Steen Jensen
Journal:  Sci Rep       Date:  2014-03-07       Impact factor: 4.379

Review 3.  Biomarker-guided repurposing of chemotherapeutic drugs for cancer therapy: a novel strategy in drug development.

Authors:  Jan Stenvang; Iben Kümler; Sune Boris Nygård; David Hersi Smith; Dorte Nielsen; Nils Brünner; José M A Moreira
Journal:  Front Oncol       Date:  2013-12-25       Impact factor: 6.244

4.  A phase II study of weekly irinotecan in patients with locally advanced or metastatic HER2- negative breast cancer and increased copy numbers of the topoisomerase 1 (TOP1) gene: a study protocol.

Authors:  Iben Kümler; Eva Balslev; Jan Stenvang; Nils Brünner; Dorte Nielsen
Journal:  BMC Cancer       Date:  2015-02-21       Impact factor: 4.430

5.  Exceptional Chemotherapy Response in Metastatic Colorectal Cancer Associated With Hyper-Indel-Hypermutated Cancer Genome and Comutation of POLD1 and MLH1.

Authors:  Manish R Sharma; James T Auman; Nirali M Patel; Juneko E Grilley-Olson; Xiaobei Zhao; Stergios J Moschos; Joel S Parker; Xiaoying Yin; Michele C Hayward; Blase N Polite; Elena Marangon; Bianca Posocco; Giuseppe Toffoli; D Neil Hayes; Federico Innocenti
Journal:  JCO Precis Oncol       Date:  2017-04-27

6.  Difference of Genome-Wide Copy Number Alterations between High-Grade Squamous Intraepithelial Lesions and Squamous Cell Carcinomas of the Uterine Cervix.

Authors:  Bum Hee Lee; Sangyoung Roh; Yu Im Kim; Ahwon Lee; Su Young Kim
Journal:  Korean J Pathol       Date:  2012-04-25

7.  Mechanisms of topoisomerase I (TOP1) gene copy number increase in a stage III colorectal cancer patient cohort.

Authors:  David Hersi Smith; Ib Jarle Christensen; Niels Frank Jensen; Bo Markussen; Maria Unni Rømer; Sune Boris Nygård; Sven Müller; Hans Jørgen Nielsen; Nils Brünner; Kirsten Vang Nielsen
Journal:  PLoS One       Date:  2013-04-05       Impact factor: 3.240

8.  Network understanding of herb medicine via rapid identification of ingredient-target interactions.

Authors:  Hai-Ping Zhang; Jian-Bo Pan; Chi Zhang; Nan Ji; Hao Wang; Zhi-Liang Ji
Journal:  Sci Rep       Date:  2014-01-16       Impact factor: 4.379

9.  Characterization of DNA topoisomerase I in three SN-38 resistant human colon cancer cell lines reveals a new pair of resistance-associated mutations.

Authors:  Niels Frank Jensen; Keli Agama; Amit Roy; David Hersi Smith; Thomas D Pfister; Maria Unni Rømer; Hong-Liang Zhang; James H Doroshow; Birgitta R Knudsen; Jan Stenvang; Nils Brünner; Yves Pommier
Journal:  J Exp Clin Cancer Res       Date:  2016-03-31

10.  Molecular characterization of irinotecan (SN-38) resistant human breast cancer cell lines.

Authors:  Haatisha Jandu; Kristina Aluzaite; Louise Fogh; Sebastian Wingaard Thrane; Julie B Noer; Joanna Proszek; Khoa Nguyen Do; Stine Ninel Hansen; Britt Damsgaard; Signe Lykke Nielsen; Magnus Stougaard; Birgitta R Knudsen; José Moreira; Petra Hamerlik; Madhavsai Gajjar; Marcel Smid; John Martens; John Foekens; Yves Pommier; Nils Brünner; Anne-Sofie Schrohl; Jan Stenvang
Journal:  BMC Cancer       Date:  2016-01-22       Impact factor: 4.430

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