Literature DB >> 22171078

Asynchronous origins of ectomycorrhizal clades of Agaricales.

Martin Ryberg1, P Brandon Matheny.   

Abstract

The ectomycorrhizal (ECM) symbiosis is the most widespread biotrophic nutritional mode in mushroom-forming fungi. ECM fungi include, though are not limited to, about 5000 described species of Agaricales from numerous, independently evolved lineages. Two central hypotheses suggest different explanations for the origin of ECM fungal diversity: (i) dual origins, initially with the Pinaceae in the Jurassic and later with angiosperms during the Late Cretaceous, and (ii) a simultaneous and convergent radiation of ECM lineages in response to cooling climate during the Palaeogene and advancing temperate ECM plant communities. Neither of these hypotheses is supported here. While we demonstrate support for asynchronous origins of ECM Agaricales, the timing of such events appears to have occurred more recently than suggested by the first hypothesis, first during the Cretaceous and later during the Palaeogene. We are also unable to reject models of rate constancy, which suggests that the diversity of ECM Agaricales is not a consequence of convergent rapid radiations following evolutionary transitions from saprotrophic to ECM habits. ECM lineages of Agaricales differ not only in age, but also in rates of diversification and rate of substitution at nuclear ribosomal RNA loci. These results question the biological uniformity of the ECM guild.

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Year:  2011        PMID: 22171078      PMCID: PMC3311903          DOI: 10.1098/rspb.2011.2428

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  49 in total

Review 1.  Evolution of mycorrhiza systems.

Authors:  J W Cairney
Journal:  Naturwissenschaften       Date:  2000-11

Review 2.  The molecular revolution in ectomycorrhizal ecology: peeking into the black-box.

Authors:  T R Horton; T D Bruns
Journal:  Mol Ecol       Date:  2001-08       Impact factor: 6.185

3.  Bellagio conference and book. Symbiosis as Source of Evolutionary Innovation: Speciation and Morphogenesis. Conference--June 25-30, 1989, Bellagio Conference Center, Italy.

Authors:  L Margulis; R Fester
Journal:  Symbiosis       Date:  1991       Impact factor: 2.268

4.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

5.  AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.

Authors:  Johan A A Nylander; James C Wilgenbusch; Dan L Warren; David L Swofford
Journal:  Bioinformatics       Date:  2007-08-30       Impact factor: 6.937

6.  GEIGER: investigating evolutionary radiations.

Authors:  Luke J Harmon; Jason T Weir; Chad D Brock; Richard E Glor; Wendell Challenger
Journal:  Bioinformatics       Date:  2007-11-15       Impact factor: 6.937

7.  The ecological dynamics of clade diversification and community assembly.

Authors:  Mark A McPeek
Journal:  Am Nat       Date:  2008-12       Impact factor: 3.926

8.  An evolutionary perspective on morphological and ecological characters in the mushroom family Inocybaceae (Agaricomycotina, Fungi).

Authors:  Martin Ryberg; Ellen Larsson; Stig Jacobsson
Journal:  Mol Phylogenet Evol       Date:  2010-02-17       Impact factor: 4.286

9.  Phylogeny and divergence times in Pinaceae: evidence from three genomes.

Authors:  X Q Wang; D C Tank; T Sang
Journal:  Mol Biol Evol       Date:  2000-05       Impact factor: 16.240

10.  LASER: a maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies.

Authors:  Daniel L Rabosky
Journal:  Evol Bioinform Online       Date:  2007-02-14       Impact factor: 1.625

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  22 in total

1.  Characterisation of seven Inocybe ectomycorrhizal morphotypes from a semiarid woody steppe.

Authors:  Diána Seress; Bálint Dima; Gábor M Kovács
Journal:  Mycorrhiza       Date:  2015-09-24       Impact factor: 3.387

2.  Accounting for local adaptation in ectomycorrhizas: a call to track geographical origin of plants, fungi, and soils in experiments.

Authors:  Megan A Rúa; Louis J Lamit; Catherine Gehring; Pedro M Antunes; Jason D Hoeksema; Cathy Zabinski; Justine Karst; Cole Burns; Michaela J Woods
Journal:  Mycorrhiza       Date:  2017-11-27       Impact factor: 3.387

3.  Genomic Comparisons of Two Armillaria Species with Different Ecological Behaviors and Their Associated Soil Microbial Communities.

Authors:  Jorge R Ibarra Caballero; Bradley M Lalande; John W Hanna; Ned B Klopfenstein; Mee-Sook Kim; Jane E Stewart
Journal:  Microb Ecol       Date:  2022-03-21       Impact factor: 4.552

Review 4.  Evolutionary Morphogenesis of Sexual Fruiting Bodies in Basidiomycota: Toward a New Evo-Devo Synthesis.

Authors:  Máté Virágh; Zsolt Merényi; Árpád Csernetics; Csenge Földi; Neha Sahu; Xiao-Bin Liu; David S Hibbett; László G Nagy
Journal:  Microbiol Mol Biol Rev       Date:  2021-11-24       Impact factor: 13.044

5.  Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor.

Authors:  Jessy Labbé; Claude Murat; Emmanuelle Morin; Gerald A Tuskan; François Le Tacon; Francis Martin
Journal:  PLoS One       Date:  2012-08-03       Impact factor: 3.240

6.  Diversity dynamics in Nymphalidae butterflies: effect of phylogenetic uncertainty on diversification rate shift estimates.

Authors:  Carlos Peña; Marianne Espeland
Journal:  PLoS One       Date:  2015-04-01       Impact factor: 3.240

Review 7.  Expanding genomics of mycorrhizal symbiosis.

Authors:  Alan Kuo; Annegret Kohler; Francis M Martin; Igor V Grigoriev
Journal:  Front Microbiol       Date:  2014-11-04       Impact factor: 5.640

8.  Historical biogeography and diversification of truffles in the Tuberaceae and their newly identified southern hemisphere sister lineage.

Authors:  Gregory Bonito; Matthew E Smith; Michael Nowak; Rosanne A Healy; Gonzalo Guevara; Efren Cázares; Akihiko Kinoshita; Eduardo R Nouhra; Laura S Domínguez; Leho Tedersoo; Claude Murat; Yun Wang; Baldomero Arroyo Moreno; Donald H Pfister; Kazuhide Nara; Alessandra Zambonelli; James M Trappe; Rytas Vilgalys
Journal:  PLoS One       Date:  2013-01-02       Impact factor: 3.240

Review 9.  Evolution of the toxins muscarine and psilocybin in a family of mushroom-forming fungi.

Authors:  Pawel Kosentka; Sarah L Sprague; Martin Ryberg; Jochen Gartz; Amanda L May; Shawn R Campagna; P Brandon Matheny
Journal:  PLoS One       Date:  2013-05-23       Impact factor: 3.240

10.  Associations between Ectomycorrhizal Fungi and Bacterial Needle Endophytes in Pinus radiata: Implications for Biotic Selection of Microbial Communities.

Authors:  Megan A Rúa; Emily C Wilson; Sarah Steele; Arielle R Munters; Jason D Hoeksema; Anna C Frank
Journal:  Front Microbiol       Date:  2016-03-31       Impact factor: 5.640

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