Literature DB >> 22170926

Engineered combined-positive-control template for real-time reverse transcription-PCR in multiple-pathogen-detection assays.

Maja Kodani1, Jonas M Winchell.   

Abstract

Recently we evaluated a custom TaqMan array card (TAC) detection system, formerly known as a TaqMan low-density array (TLDA) card, for simultaneous real-time PCR identification of 21 pathogens and three control targets in duplicate from respiratory specimens (M. Kodani et al., J. Clin. Microbiol. 49:2175-2182, 2011). We engineered an adaptable and expandable system of in vitro RNA transcripts to serve as a combined positive control for both DNA and RNA targets in multiple-pathogen-detection technologies based on real-time reverse transcription-PCR.

Mesh：

Year:  2011        PMID： 22170926      PMCID： PMC3295119          DOI： 10.1128/JCM.05987-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  11 in total

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2.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
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3.  Development of a widely applicable positive control strategy to support detection of infectious salmon anaemia virus (ISAV) using Taqman real-time PCR.

Authors:  M Snow; P McKay; I Matejusova
Journal:  J Fish Dis       Date:  2009-02       Impact factor: 2.767

4.  Application of TaqMan low-density arrays for simultaneous detection of multiple respiratory pathogens.

Authors:  Maja Kodani; Genyan Yang; Laura M Conklin; Tatiana C Travis; Cynthia G Whitney; Larry J Anderson; Stephanie J Schrag; Thomas H Taylor; Bernard W Beall; Robert F Breiman; Daniel R Feikin; M Kariuki Njenga; Leonard W Mayer; M Steven Oberste; Maria Lucia C Tondella; Jonas M Winchell; Stephen L Lindstrom; Dean D Erdman; Barry S Fields
Journal:  J Clin Microbiol       Date:  2011-04-06       Impact factor: 5.948

5.  Detection of nine respiratory RNA viruses using three multiplex RT-PCR assays incorporating a novel RNA internal control transcript.

Authors:  Helen Auburn; Mark Zuckerman; Simon Broughton; Anne Greenough; Melvyn Smith
Journal:  J Virol Methods       Date:  2011-05-19       Impact factor: 2.014

6.  A simple approach for preparing real-time PCR positive reaction controls for rare or emerging viruses.

Authors:  David M Whiley; Cassandra E Faux; Seweryn Bialasiewicz; Allan R Gould; Stephen B Lambert; Michael D Nissen; Theo P Sloots
Journal:  J Clin Virol       Date:  2010-04-22       Impact factor: 3.168

7.  One multiplex control for 29 cystic fibrosis mutations.

Authors:  Roger V Lebo; Michelle Bixler; Donna Galehouse
Journal:  Genet Test       Date:  2007

8.  Impact of rapid detection of viral and atypical bacterial pathogens by real-time polymerase chain reaction for patients with lower respiratory tract infection.

Authors:  Jan Jelrik Oosterheert; Anton M van Loon; Rob Schuurman; Andy I M Hoepelman; Eelko Hak; Steven Thijsen; George Nossent; Margriet M E Schneider; Willem M N Hustinx; Marc J M Bonten
Journal:  Clin Infect Dis       Date:  2005-10-13       Impact factor: 9.079

9.  Modelling the co-occurrence of Streptococcus pneumoniae with other bacterial and viral pathogens in the upper respiratory tract.

Authors:  Peter Jacoby; Kelly Watson; Jacinta Bowman; Amanda Taylor; Thomas V Riley; David W Smith; Deborah Lehmann
Journal:  Vaccine       Date:  2006-09-22       Impact factor: 3.641

10.  Etiology of community-acquired pneumonia: increased microbiological yield with new diagnostic methods.

Authors:  Niclas Johansson; Mats Kalin; Annika Tiveljung-Lindell; Christian G Giske; Jonas Hedlund
Journal:  Clin Infect Dis       Date:  2010-01-15       Impact factor: 9.079
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  20 in total

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Authors:  Clayton O Onyango; Vladimir Loparev; Shirley Lidechi; Vinod Bhullar; D Scott Schmid; Kay Radford; Michael K Lo; Paul Rota; Barbara W Johnson; Jorge Munoz; Martina Oneko; Deron Burton; Carolyn M Black; John Neatherlin; Joel M Montgomery; Barry Fields
Journal:  J Clin Microbiol       Date:  2017-04-12       Impact factor: 5.948

2.  Detection and characterization of Mycoplasma pneumoniae during an outbreak of respiratory illness at a university.

Authors:  Jessica L Waller; Maureen H Diaz; Brianna L Petrone; Alvaro J Benitez; Bernard J Wolff; Laura Edison; Melissa Tobin-D'Angelo; Ashley Moore; Audrey Martyn; Hope Dishman; Cherie L Drenzek; Kim Turner; Lauri A Hicks; Jonas M Winchell
Journal:  J Clin Microbiol       Date:  2013-12-26       Impact factor: 5.948

Review 3.  Current and emerging Legionella diagnostics for laboratory and outbreak investigations.

Authors:  Jeffrey W Mercante; Jonas M Winchell
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

4.  Improved Detection of Respiratory Pathogens by Use of High-Quality Sputum with TaqMan Array Card Technology.

Authors:  Bernard J Wolff; Anna M Bramley; Kathleen A Thurman; Cynthia G Whitney; Brett Whitaker; Wesley H Self; Sandra R Arnold; Christopher Trabue; Richard G Wunderink; Jon McCullers; Kathryn M Edwards; Seema Jain; Jonas M Winchell
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

5.  Simultaneous detection of multiple pathogens with the TaqMan Array Card.

Authors:  Rachael Lappan; Thanavit Jirapanjawat; Deborah A Williamson; Sigrid Lange; Steven L Chown; Chris Greening
Journal:  MethodsX       Date:  2022-04-20

6.  A laboratory-developed TaqMan Array Card for simultaneous detection of 19 enteropathogens.

Authors:  Jie Liu; Jean Gratz; Caroline Amour; Gibson Kibiki; Stephen Becker; Lalitha Janaki; Jaco J Verweij; Mami Taniuchi; Shihab U Sobuz; Rashidul Haque; Doris M Haverstick; Eric R Houpt
Journal:  J Clin Microbiol       Date:  2012-11-21       Impact factor: 5.948

7.  Impact of an Urban Sanitation Intervention on Enteric Pathogen Detection in Soils.

Authors:  Drew Capone; David Berendes; Oliver Cumming; David Holcomb; Jackie Knee; Konstantinos T Konstantinidis; Karen Levy; Rassul Nalá; Benjamin B Risk; Jill Stewart; Joe Brown
Journal:  Environ Sci Technol       Date:  2021-07-08       Impact factor: 9.028

8.  Development of a TaqMan Array Card for Acute-Febrile-Illness Outbreak Investigation and Surveillance of Emerging Pathogens, Including Ebola Virus.

Authors:  Jie Liu; Caroline Ochieng; Steve Wiersma; Ute Ströher; Jonathan S Towner; Shannon Whitmer; Stuart T Nichol; Christopher C Moore; Gilbert J Kersh; Cecilia Kato; Christopher Sexton; Jeannine Petersen; Robert Massung; Christine Hercik; John A Crump; Gibson Kibiki; Athanasia Maro; Buliga Mujaga; Jean Gratz; Shevin T Jacob; Patrick Banura; W Michael Scheld; Bonventure Juma; Clayton O Onyango; Joel M Montgomery; Eric Houpt; Barry Fields
Journal:  J Clin Microbiol       Date:  2015-10-21       Impact factor: 5.948

9.  Burden and etiology of moderate and severe diarrhea in children less than 5 years of age living in north and south of China: Prospective, population-based surveillance.

Authors:  Hong-Lu Zhou; Theresa Bessey; Song-Mei Wang; Zhao-Jun Mo; Leslie Barclay; Jin-Xia Wang; Can-Jing Zhang; Jing-Chen Ma; Chao Qiu; Gan Zhao; Rong-Cheng Li; Yu-Liang Zhao; Baoming Jiang; Xuan-Yi Wang
Journal:  Gut Pathog       Date:  2021-05-24       Impact factor: 4.181

10.  Optimization of Multiple Pathogen Detection Using the TaqMan Array Card: Application for a Population-Based Study of Neonatal Infection.

Authors:  Maureen H Diaz; Jessica L Waller; Rebecca A Napoliello; Md Shahidul Islam; Bernard J Wolff; Daniel J Burken; Rhiannon L Holden; Velusamy Srinivasan; Melissa Arvay; Lesley McGee; M Steven Oberste; Cynthia G Whitney; Stephanie J Schrag; Jonas M Winchell; Samir K Saha
Journal:  PLoS One       Date:  2013-06-21       Impact factor: 3.240
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