Literature DB >> 22167328

Application of 16s rDNA and cytochrome b ribosomal markers in studies of lineage and fish populations structure of aquatic species.

Syarul Nataqain Baharum1, A'wani Aziz Nurdalila.   

Abstract

The most economically important form of aquaculture is fish farming, which is an industry that accounts for an ever increasing share of world fishery production. Molecular markers can be used to enhance the productivity of the aquaculture and fish industries to meet the increasing demand. Molecular markers can be identified via a DNA test regardless of the developmental stage, age or environmental challenges experienced by the organism. The application of 16s and cytochrome b markers has enabled rapid progress in investigations of genetic variability and inbreeding, parentage assignments, species and strain identification and the construction of high resolution genetic linkage maps for aquaculture fisheries. In this review, the advantages of principles and potential power tools of 16s and cytochrome b markers are discussed. Main findings in term of trend, aspects and debates on the reviewed issue made from the model of aquatic species for the benefit of aquaculture genomics and aquaculture genetics research are discussed. The concepts in this review are illustrated with various research examples and results that relate theory to reality and provide a strong review of the current status of these biotechnology topics.

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Year:  2011        PMID: 22167328     DOI: 10.1007/s11033-011-1320-2

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  42 in total

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Authors:  Peter R Møller; Peter Gravlund
Journal:  Mol Phylogenet Evol       Date:  2003-03       Impact factor: 4.286

2.  Polyphyly of the mail-cheeked fishes (Teleostei: Scorpaeniformes): evidence from mitochondrial and nuclear sequence data.

Authors:  Wm Leo Smith; Ward C Wheeler
Journal:  Mol Phylogenet Evol       Date:  2004-08       Impact factor: 4.286

3.  The molecular diversity of adriatic spined loaches (Teleostei, Cobitidae).

Authors:  Anabel Perdices; Jörg Bohlen; Ignacio Doadrio
Journal:  Mol Phylogenet Evol       Date:  2007-05-25       Impact factor: 4.286

4.  Systematics and biogeography of New World sea catfishes (Siluriformes: Ariidae) as inferred from mitochondrial, nuclear, and morphological evidence.

Authors:  Ricardo Betancur-R; Arturo Acero P; Eldredge Bermingham; Richard Cooke
Journal:  Mol Phylogenet Evol       Date:  2007-02-28       Impact factor: 4.286

5.  Escape from the Ponto-Caspian: evolution and biogeography of an endemic goby species flock (Benthophilinae: Gobiidae: Teleostei).

Authors:  Matthew E Neilson; Carol A Stepien
Journal:  Mol Phylogenet Evol       Date:  2009-07       Impact factor: 4.286

6.  Molecular resolution of the systematics of a problematic group of fishes (Teleostei: Osmeridae) and evidence for morphological homoplasy.

Authors:  Katriina L Ilves; Eric B Taylor
Journal:  Mol Phylogenet Evol       Date:  2008-11-05       Impact factor: 4.286

7.  A mitochondrial DNA based phylogeny of weakfish species of the Cynoscion group (Pisces: Sciaenidae).

Authors:  Carlos Vergara-Chen; Windsor E Aguirre; Mercedes González-Wangüemert; Eldredge Bermingham
Journal:  Mol Phylogenet Evol       Date:  2009-06-30       Impact factor: 4.286

8.  Evolution of trophic types in emperor fishes ( Lethrinus, Lethrinidae, Percoidei) based on cytochrome B gene sequence variation.

Authors:  Alicia M Lo Galbo; Kent E Carpenter; David L Reed
Journal:  J Mol Evol       Date:  2002-06       Impact factor: 2.395

9.  Molecular phylogeny of the lionfish genera Dendrochirus and Pterois (Scorpaenidae, Pteroinae) based on mitochondrial DNA sequences.

Authors:  Marc Kochzius; Rainer Söller; Maroof A Khalaf; Dietmar Blohm
Journal:  Mol Phylogenet Evol       Date:  2003-09       Impact factor: 4.286

10.  New methods for selective isolation of bacterial DNA from human clinical specimens.

Authors:  Hans-Peter Horz; Sebastian Scheer; Morgana E Vianna; Georg Conrads
Journal:  Anaerobe       Date:  2009-05-20       Impact factor: 3.331

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Authors:  Syarul Nataqain Baharum; Yosmetha Mayalvanan; Maya Erna Natnan; Kamalrul Azlan Azizan; Hamidun Bunawan; Nik Raikhan Nik Him; Chen-Fei Low; Chou-Min Chong
Journal:  3 Biotech       Date:  2022-08-03       Impact factor: 2.893

2.  Rapid Full-Cycle Technique to Control Adulteration of Meat Products: Integration of Accelerated Sample Preparation, Recombinase Polymerase Amplification, and Test-Strip Detection.

Authors:  Aleksandr V Ivanov; Demid S Popravko; Irina V Safenkova; Elena A Zvereva; Boris B Dzantiev; Anatoly V Zherdev
Journal:  Molecules       Date:  2021-11-11       Impact factor: 4.411

3.  Variation in global distribution, population structures, and demographic history for four Trichiurus cutlassfishes.

Authors:  Hsiu-Chin Lin; Chia-Jung Tsai; Hui-Yu Wang
Journal:  PeerJ       Date:  2021-12-15       Impact factor: 2.984

  3 in total

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