| Literature DB >> 22163847 |
Teiti Yagura1, Kazuo Makita, Hiromasa Yamamoto, Carlos F M Menck, André P Schuch.
Abstract
Solar ultraviolet (UV) radiation is widely known as a genotoxic environmental agent that affects Earth ecosystems and the human population. As a primary consequence of the stratospheric ozone layer depletion observed over the last decades, the increasing UV incidence levels have heightened the concern regarding deleterious consequences affecting both the biosphere and humans, thereby leading to an increase in scientific efforts to understand the role of sunlight in the induction of DNA damage, mutagenesis, and cell death. In fact, the various UV-wavelengths evoke characteristic biological impacts that greatly depend on light absorption of biomolecules, especially DNA, in living organisms, thereby justifying the increasing importance of developing biological sensors for monitoring the harmful impact of solar UV radiation under various environmental conditions. In this review, several types of biosensors proposed for laboratory and field application, that measure the biological effects of the UV component of sunlight, are described. Basically, the applicability of sensors based on DNA, bacteria or even mammalian cells are presented and compared. Data are also presented showing that on using DNA-based sensors, the various types of damage produced differ when this molecule is exposed in either an aqueous buffer or a dry solution. Apart from the data thus generated, the development of novel biosensors could help in evaluating the biological effects of sunlight on the environment. They also emerge as alternative tools for using live animals in the search for protective sunscreen products.Entities:
Keywords: DNA damage; UV radiation; biological dosimetry; biosensors; sunlight
Mesh:
Substances:
Year: 2011 PMID: 22163847 PMCID: PMC3231322 DOI: 10.3390/s110404277
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1.Year-round (2009) solar UVA (blue) and UVB (red) doses measured in São Paulo—SP (23°32′S, 46°38′W), Brazil.
* Periods in which the measurements were not performed, due to technical reasons.
Figure 2.Solar UVA (blue) and UVB (red) irradiation profiles at (a) São Martinho da Serra—RS (29°44′S, 53°82′W), (b) São Paulo—SP (23°32′S, 46°38′W), and (c) Natal—RN (5°47′S, 35°12′W), Brazil.
Figure 3.The absorption spectrum for the DNA molecule. A sample of purified plasmid DNA (pCMUT vector), diluted in a TE buffer (10 mM Tris-HCl [pH 8.0], 1 mM EDTA [pH 8.0]) at the indicated concentration, was used to obtain this spectrum, with an Evolution 300 UV-Vis Spectrophotometer (ThermoFisher Scientific, USA).
Figure 4.The main DNA lesions induced by UV light: CPD-cyclobutane pyrimidine dimer; 6-4PP-pyrimidine (6-4) pyrimidone photoproduct; DewarPP-Dewar valence isomer; Single strand breaks; 8-oxoG-7, 8-dihydro-8-oxoguanine; Spore photoproduct.
Figure 5.Analysis of UVC-induced DNA lesions induced in DNA in a buffer or under dry conditions. (A) Representative example of DNA photolesion induction after DNA exposure to UVC radiation. Plasmid DNA samples were UVC-exposed either diluted in a TE buffer (wet) or dried on a glass surface (dry) at room temperature and atmospheric pressure. 200 ng of both recovered DNA samples were treated with T4-endo V and UVDE enzymes. FI indicates the supercoiled DNA form and FII the relaxed DNA form resulting from enzymatic cleavage of DNA photoproducts. (B) Quantification of DNA photoproducts after UVC lamp exposure. T4-endo V-SS—T4-endonuclease V sensitive sites; UVDE-SS—Ultraviolet Damage Endonuclease sensitive sites (for details of the methodology employed the reader should refer to [6]).
Comparison of different biosensors.
| Vitamin D [ | 40.0 J/m2 (282 nm) | Photoisomer concentration | Spectrophotometric | Chemical measurements, analysis a beneficial effect, easy to perform, high spectral selectivity. |
| Uracil thin layer-OD [ | 10.0 J/m2 (254 nm) | Polycrystalline uracil thin-layer | Spectrophotometric | Chemical measurements, easy to perform. |
| Uracil thin layer-OWLS [ | 0.8 J/m2 (254 nm) | Optogeometrical parameters of a thin layer | Refractive index changes | Chemical measurements, easy to perform. |
| Bacteriophage λ DNA [ | 6.1 kJ/m2 (sunlight) | DNA polymerase blockage | PCR | Portable, robust, stability. |
| Phage T7 DNA [ | 10.0 J/m2 (254 nm) | DNA polymerase blockage | QPCR | Portable, robust, stability. |
| Naked calf thymus DNA solution [ | ∼10.0 J/m2 (equivalent to UVB) | CPDs | Antibodies | Portable, direct lesion measurements. |
| Naked calf-thymus DNA + bacteriophage PWH3a-P1 [ | 1.9 kJ/m2 (305 nm) | CPDs, plaque forming units | Radioimmunoassay, viral infectivity | Portable, direct lesion measurements, determines biological activity. |
| Plasmid DNA [ | 50.0 J/m2 (UVC) | CPDs, (6-4)PPs, oxidized bases, SSBs, plasmid viability | DNA repair enzymes, antibodies, alkali treatment, genotoxic effects | Portable, robust, direct and specific lesions measurements, determines biological activity. |
| 650.0 J/m2 (sunlight) | Colony forming units | Spore inactivation | Portable, robust, easy to perform, determines biological activity. | |
| DLR-biofilm, | 10.0 J/m2 (254 nm) | Optical density | Image analysis | Portable, robust, easy to perform. |
| RoDos [ | 1.0 J/m2 (UVC) | Colonies, optical density | Cellular survival, image analysis | Direct evaluation of biological effects on mammalian cells |
| Human keratinocytes [ | 3.5 kJ/m2 (UVB) | CPDs, SSBs | Comet assay, antibodies | Direct evaluation of biological effects on human cells |
| Reconstructed skin [ | 3.5 kJ/m2 (UVB) | CPDs, SSBs | Comet assay, antibodies | Direct evaluation of biological effects on human cells |