Literature DB >> 22158898

Coupling mammalian cell surface display with somatic hypermutation for the discovery and maturation of human antibodies.

Peter M Bowers1, Robert A Horlick, Tamlyn Y Neben, Rachelle M Toobian, Geoffrey L Tomlinson, Jennifer L Dalton, Heather A Jones, Andy Chen, Laurence Altobell, Xue Zhang, John L Macomber, Irina P Krapf, Betty F Wu, Audrey McConnell, Betty Chau, Trevin Holland, Ashley D Berkebile, Steven S Neben, William J Boyle, David J King.   

Abstract

A novel approach has been developed for the isolation and maturation of human antibodies that replicates key features of the adaptive immune system by coupling in vitro somatic hypermutation (SHM) with mammalian cell display. SHM is dependent on the action of the B cell specific enzyme, activation-induced cytidine deaminase (AID), and can be replicated in non-B cells through expression of recombinant AID. A library of human antibodies, based on germline V-gene segments with recombined human regions was used to isolate low-affinity antibodies to human β nerve growth factor (hβNGF). These antibodies, initially naïve to SHM, were subjected to AID-directed SHM in vitro and selected using the same mammalian cell display system, as illustrated by the maturation of one of the antibodies to low pM K(D). This approach overcomes many of the previous limitations of mammalian cell display, enabling direct selection and maturation of antibodies as full-length, glycosylated IgGs.

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Year:  2011        PMID: 22158898      PMCID: PMC3251138          DOI: 10.1073/pnas.1114010108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Somatic hypermutation of the AID transgene in B and non-B cells.

Authors:  Alberto Martin; Matthew D Scharff
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-29       Impact factor: 11.205

Review 2.  The evolutionary and structural 'logic' of antigen receptor diversity.

Authors:  Mark M Davis
Journal:  Semin Immunol       Date:  2004-08       Impact factor: 11.130

3.  Targeting vectors for intracellular immunisation.

Authors:  L Persic; M Righi; A Roberts; H R Hoogenboom; A Cattaneo; A Bradbury
Journal:  Gene       Date:  1997-03-10       Impact factor: 3.688

4.  Nerve growth factor mediates hyperalgesia and cachexia in auto-immune arthritis.

Authors:  David L Shelton; Jörg Zeller; Wei-Hsien Ho; Jaume Pons; Arnon Rosenthal
Journal:  Pain       Date:  2005-07       Impact factor: 6.961

5.  Gene segments encoding transmembrane carboxyl termini of immunoglobulin gamma chains.

Authors:  J Rogers; E Choi; L Souza; C Carter; C Word; M Kuehl; D Eisenberg; R Wall
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

6.  Antagonism of nerve growth factor-TrkA signaling and the relief of pain.

Authors:  Patrick W Mantyh; Martin Koltzenburg; Lorne M Mendell; Leslie Tive; David L Shelton
Journal:  Anesthesiology       Date:  2011-07       Impact factor: 7.892

Review 7.  A coming-of-age story: activation-induced cytidine deaminase turns 10.

Authors:  Rebecca K Delker; Sebastian D Fugmann; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2009-10-20       Impact factor: 25.606

8.  High-throughput sequencing of the zebrafish antibody repertoire.

Authors:  Joshua A Weinstein; Ning Jiang; Richard A White; Daniel S Fisher; Stephen R Quake
Journal:  Science       Date:  2009-05-08       Impact factor: 47.728

Review 9.  AID-initiated purposeful mutations in immunoglobulin genes.

Authors:  Myron F Goodman; Matthew D Scharff; Floyd E Romesberg
Journal:  Adv Immunol       Date:  2007       Impact factor: 3.543

10.  An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody.

Authors:  Jens C Krause; Damian C Ekiert; Terrence M Tumpey; Patricia B Smith; Ian A Wilson; James E Crowe
Journal:  MBio       Date:  2011-02-08       Impact factor: 7.867

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  38 in total

1.  Efficient method to optimize antibodies using avian leukosis virus display and eukaryotic cells.

Authors:  Changming Yu; Gennett M Pike; Tommy A Rinkoski; Cristina Correia; Scott H Kaufmann; Mark J Federspiel
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

2.  Directed evolution methods for overcoming trade-offs between protein activity and stability.

Authors:  Samuel D Stimple; Matthew D Smith; Peter M Tessier
Journal:  AIChE J       Date:  2019-10-09       Impact factor: 3.993

3.  Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies.

Authors:  Peter M Bowers; Petra Verdino; Zhengyuan Wang; Jean da Silva Correia; Mark Chhoa; Griffin Macondray; Minjee Do; Tamlyn Y Neben; Robert A Horlick; Robyn L Stanfield; Ian A Wilson; David J King
Journal:  J Biol Chem       Date:  2014-10-15       Impact factor: 5.157

Review 4.  Biomolecular engineering for nanobio/bionanotechnology.

Authors:  Teruyuki Nagamune
Journal:  Nano Converg       Date:  2017-04-24

5.  Surface display of a single-domain antibody library on Gram-positive bacteria.

Authors:  Filippa Fleetwood; Nick Devoogdt; Mireille Pellis; Ulrich Wernery; Serge Muyldermans; Stefan Ståhl; John Löfblom
Journal:  Cell Mol Life Sci       Date:  2012-10-13       Impact factor: 9.261

6.  In vitro evolution of antibody affinity via insertional scanning mutagenesis of an entire antibody variable region.

Authors:  Kalliopi Skamaki; Stephane Emond; Matthieu Chodorge; John Andrews; D Gareth Rees; Daniel Cannon; Bojana Popovic; Andrew Buchanan; Ralph R Minter; Florian Hollfelder
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-16       Impact factor: 11.205

7.  Directed evolution using dCas9-targeted somatic hypermutation in mammalian cells.

Authors:  Gaelen T Hess; Laure Frésard; Kyuho Han; Cameron H Lee; Amy Li; Karlene A Cimprich; Stephen B Montgomery; Michael C Bassik
Journal:  Nat Methods       Date:  2016-10-31       Impact factor: 28.547

8.  Increased Fab thermoresistance via VH-targeted directed evolution.

Authors:  Kevin C Entzminger; Jennifer L Johnson; Jeongmin Hyun; Raquel L Lieberman; Jennifer A Maynard
Journal:  Protein Eng Des Sel       Date:  2015-08-16       Impact factor: 1.650

9.  Humanization of antibodies using heavy chain complementarity-determining region 3 grafting coupled with in vitro somatic hypermutation.

Authors:  Peter M Bowers; Tamlyn Y Neben; Geoffery L Tomlinson; Jennifer L Dalton; Larry Altobell; Xue Zhang; John L Macomber; Betty F Wu; Rachelle M Toobian; Audrey D McConnell; Petra Verdino; Betty Chau; Robert A Horlick; David J King
Journal:  J Biol Chem       Date:  2013-01-25       Impact factor: 5.157

10.  Simultaneous surface display and secretion of proteins from mammalian cells facilitate efficient in vitro selection and maturation of antibodies.

Authors:  Robert A Horlick; John L Macomber; Peter M Bowers; Tamlyn Y Neben; Geoffery L Tomlinson; Irina P Krapf; Jennifer L Dalton; Petra Verdino; David J King
Journal:  J Biol Chem       Date:  2013-05-20       Impact factor: 5.157

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