Literature DB >> 22155539

Advances in human proteomics at high scale with the SOMAscan proteomics platform.

Larry Gold1, Jeffrey J Walker, Sheri K Wilcox, Stephen Williams.   

Abstract

In 1997, while still working at NeXstar Pharmaceuticals, several of us made a proteomic bet. We thought then, and continue to think, that proteomics offers a chance to identify disease-specific biomarkers and improve healthcare. However, interrogating proteins turned out to be a much harder problem than interrogating nucleic acids. Consequently, the 'omics' revolution has been fueled largely by genomics. High-scale proteomics promises to transform medicine with personalized diagnostics, prevention, and treatment. We have now reached into the human proteome to quantify more than 1000 proteins in any human matrix - serum, plasma, CSF, BAL, and also tissue extracts - with our new SOMAmer-based proteomics platform. The surprising and pleasant news is that we have made unbiased protein biomarker discovery a routine and fast exercise. The downstream implications of the platform are substantial.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22155539     DOI: 10.1016/j.nbt.2011.11.016

Source DB:  PubMed          Journal:  N Biotechnol        ISSN: 1871-6784            Impact factor:   5.079


  77 in total

1.  Highly multiplexed proteomic assessment of human bone marrow in acute myeloid leukemia.

Authors:  Haydar Çelik; Katherine E Lindblad; Bogdan Popescu; Gege Gui; Meghali Goswami; Janet Valdez; Christin DeStefano; Catherine Lai; Julie Thompson; Jack Y Ghannam; Giovanna Fantoni; Angélique Biancotto; Julián Candia; Foo Cheung; Gauthaman Sukumar; Clifton L Dalgard; Richard H Smith; Andre Larochelle; Laura W Dillon; Christopher S Hourigan
Journal:  Blood Adv       Date:  2020-01-28

Review 2.  Aptamers as a novel tool for diagnostics and therapy.

Authors:  Onat Kadioglu; Anna Helena Malczyk; Henry Johannes Greten; Thomas Efferth
Journal:  Invest New Drugs       Date:  2015-02-01       Impact factor: 3.850

3.  Evolution of abiotic cubane chemistries in a nucleic acid aptamer allows selective recognition of a malaria biomarker.

Authors:  Yee-Wai Cheung; Pascal Röthlisberger; Ariel E Mechaly; Patrick Weber; Fabienne Levi-Acobas; Young Lo; Alvin W C Wong; Andrew B Kinghorn; Ahmed Haouz; G Paul Savage; Marcel Hollenstein; Julian A Tanner
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-06       Impact factor: 11.205

4.  Identification of Plasma Proteome Signatures Associated With Surgery Using SOMAscan.

Authors:  Tamara G Fong; Noel Y Chan; Simon T Dillon; Wenxiao Zhou; Bridget Tripp; Long H Ngo; Hasan H Otu; Sharon K Inouye; Sarinnapha M Vasunilashorn; Zara Cooper; Zhongcong Xie; Edward R Marcantonio; Towia A Libermann
Journal:  Ann Surg       Date:  2021-04-01       Impact factor: 12.969

5.  Tie2 protects the vasculature against thrombus formation in systemic inflammation.

Authors:  Sarah J Higgins; Karen De Ceunynck; John A Kellum; Xiuying Chen; Xuesong Gu; Sharjeel A Chaudhry; Sol Schulman; Towia A Libermann; Shulin Lu; Nathan I Shapiro; David C Christiani; Robert Flaumenhaft; Samir M Parikh
Journal:  J Clin Invest       Date:  2018-03-05       Impact factor: 14.808

6.  Molecular-based diagnosis of multiple sclerosis and its progressive stage.

Authors:  Christopher Barbour; Peter Kosa; Mika Komori; Makoto Tanigawa; Ruturaj Masvekar; Tianxia Wu; Kory Johnson; Panagiotis Douvaras; Valentina Fossati; Ronald Herbst; Yue Wang; Keith Tan; Mark Greenwood; Bibiana Bielekova
Journal:  Ann Neurol       Date:  2017-11       Impact factor: 10.422

7.  Ionizing radiation exposure: hazards, prevention, and biomarker screening.

Authors:  Hongxiang Mu; Jing Sun; Linwei Li; Jie Yin; Nan Hu; Weichao Zhao; Dexin Ding; Lan Yi
Journal:  Environ Sci Pollut Res Int       Date:  2018-04-29       Impact factor: 4.223

8.  Aptamer-based proteomics of serum and plasma in acquired aplastic anemia.

Authors:  Valentina Giudice; Angélique Biancotto; Zhijie Wu; Foo Cheung; Julián Candia; Giovanna Fantoni; Sachiko Kajigaya; Olga Rios; Danielle Townsley; Xingmin Feng; Neal S Young
Journal:  Exp Hematol       Date:  2018-10-09       Impact factor: 3.084

Review 9.  Tapping the RNA world for therapeutics.

Authors:  Judy Lieberman
Journal:  Nat Struct Mol Biol       Date:  2018-04-16       Impact factor: 15.369

Review 10.  Unleashing the power of proteomics to develop blood-based cancer markers.

Authors:  Ayumu Taguchi; Samir M Hanash
Journal:  Clin Chem       Date:  2012-10-24       Impact factor: 8.327

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